RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C KEG1P43614 200 aa3.32□□□□□ -1.88
USB1YLR132C CIN2P46670 268 aa3.32□□□□□ -1.88
USB1YLR132C KTR6P54070 446 aa3.32□□□□□ -1.88
USB1YLR132C MYO5Q04439 1219 aaKnown RBP3.32□□□□□ -1.88
USB1YLR132C FSH2Q05015 223 aa3.32□□□□□ -1.88
USB1YLR132C GAS2Q06135 555 aa3.32□□□□□ -1.88
USB1YLR132C MFG1Q07684 458 aa3.32□□□□□ -1.88
USB1YLR132C YOR012WQ12351 137 aa3.32□□□□□ -1.88
USB1YLR132C AIM45Q12480 344 aaKnown RBP3.32□□□□□ -1.88
USB1YLR132C FOL3Q12676 427 aaPredicted RBP3.32□□□□□ -1.88
USB1YLR132C UBA3Q99344 299 aa3.32□□□□□ -1.88
USB1YLR132C MAK31P23059 88 aa3.31□□□□□ -1.88
USB1YLR132C COY1P34237 679 aa3.31□□□□□ -1.88
USB1YLR132C BMT2P38278 337 aa3.31□□□□□ -1.88
USB1YLR132C YPT35P38815 214 aaKnown RBP3.31□□□□□ -1.88
USB1YLR132C YHR122WP38829 231 aa3.31□□□□□ -1.88
USB1YLR132C PRP39P39682 629 aaKnown RBP3.31□□□□□ -1.88
USB1YLR132C YNL320WP42840 284 aa3.31□□□□□ -1.88
USB1YLR132C MKC7P53379 596 aa3.31□□□□□ -1.88
USB1YLR132C MGR3Q04472 501 aa3.31□□□□□ -1.88
USB1YLR132C NAT4Q04751 285 aa3.31□□□□□ -1.88
USB1YLR132C DET1Q99288 334 aaKnown RBP3.31□□□□□ -1.88
USB1YLR132C FMP27Q06179 2628 aa3.3□□□□□ -1.88
USB1YLR132C MSB2P32334 1306 aa3.3□□□□□ -1.88
USB1YLR132C BEM2P39960 2167 aaKnown RBP3.3□□□□□ -1.88
USB1YLR132C PRB1P09232 635 aa3.3□□□□□ -1.88
USB1YLR132C RNR2P09938 399 aaKnown RBP3.3□□□□□ -1.88
USB1YLR132C RPL23AP0CX41 137 aaKnown RBP3.3□□□□□ -1.88
USB1YLR132C RPL23BP0CX42 137 aaKnown RBP3.3□□□□□ -1.88
USB1YLR132C PCL1P24867 279 aa3.3□□□□□ -1.88
USB1YLR132C MXR2P25566 168 aa3.3□□□□□ -1.88
USB1YLR132C SRB2P34162 210 aa3.3□□□□□ -1.88
USB1YLR132C WSC4P38739 605 aa3.3□□□□□ -1.88
USB1YLR132C PFS1P38872 237 aa3.3□□□□□ -1.88
USB1YLR132C TIM17P39515 158 aa3.3□□□□□ -1.88
USB1YLR132C NAS2P40555 220 aa3.3□□□□□ -1.88
USB1YLR132C IGD1P43598 195 aa3.3□□□□□ -1.88
USB1YLR132C SHE4P51534 789 aa3.3□□□□□ -1.88
USB1YLR132C YNL134CP53912 376 aaKnown RBP3.3□□□□□ -1.88
USB1YLR132C BSC6Q08280 497 aa3.3□□□□□ -1.88
USB1YLR132C SFM1Q12314 213 aa3.3□□□□□ -1.88
USB1YLR132C LDB17Q12342 491 aa3.3□□□□□ -1.88
USB1YLR132C RPS16AP0CX51 143 aaKnown RBP3.29□□□□□ -1.88
USB1YLR132C RPS16BP0CX52 143 aaKnown RBP3.29□□□□□ -1.88
USB1YLR132C MRPS5P33759 307 aa3.29□□□□□ -1.88
USB1YLR132C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
USB1YLR132C UTH1P36135 365 aa3.29□□□□□ -1.88
USB1YLR132C PEX22P39718 180 aa3.29□□□□□ -1.88
USB1YLR132C TIS11P47977 285 aa3.29□□□□□ -1.88
USB1YLR132C DNL4Q08387 944 aaPredicted RBP3.29□□□□□ -1.88
USB1YLR132C ACC1Q00955 2233 aaKnown RBP3.28□□□□□ -1.88
USB1YLR132C COX4P04037 155 aa3.28□□□□□ -1.88
USB1YLR132C ASP3-2P0CX77 362 aa3.28□□□□□ -1.88
USB1YLR132C ASP3-3P0CX78 362 aa3.28□□□□□ -1.88
USB1YLR132C ASP3-4P0CX79 362 aa3.28□□□□□ -1.88
USB1YLR132C ASP3-1P0CZ17 362 aa3.28□□□□□ -1.88
USB1YLR132C HSP26P15992 214 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
USB1YLR132C FAR1P21268 830 aa3.28□□□□□ -1.88
USB1YLR132C CIN8P27895 1000 aa3.28□□□□□ -1.88
USB1YLR132C VMA5P31412 392 aaKnown RBP3.28□□□□□ -1.88
USB1YLR132C PRS1P32895 427 aaKnown RBP3.28□□□□□ -1.88
USB1YLR132C CTK3P46963 296 aaPredicted RBP3.28□□□□□ -1.88
USB1YLR132C PRP38Q00723 242 aaPredicted RBP3.28□□□□□ -1.88
USB1YLR132C SLT2Q00772 484 aa3.28□□□□□ -1.88
USB1YLR132C ENT5Q03769 411 aaKnown RBP3.28□□□□□ -1.88
USB1YLR132C YHC1Q05900 231 aaKnown RBP3.28□□□□□ -1.88
USB1YLR132C MCH1Q07376 486 aa3.28□□□□□ -1.88
USB1YLR132C IRA1P18963 3092 aa3.27□□□□□ -1.89
USB1YLR132C RPS14AP06367 137 aaKnown RBP3.27□□□□□ -1.89
USB1YLR132C CMK2P22517 447 aa3.27□□□□□ -1.89
USB1YLR132C MIR1P23641 311 aaKnown RBP3.27□□□□□ -1.89
USB1YLR132C CHA1P25379 360 aaKnown RBP3.27□□□□□ -1.89
USB1YLR132C MKK1P32490 508 aa3.27□□□□□ -1.89
USB1YLR132C PCH2P38126 564 aa3.27□□□□□ -1.89
USB1YLR132C YBR241CP38142 488 aa3.27□□□□□ -1.89
USB1YLR132C IST2P38250 946 aa3.27□□□□□ -1.89
USB1YLR132C ATG7P38862 630 aa3.27□□□□□ -1.89
USB1YLR132C RPS14BP39516 138 aaKnown RBP3.27□□□□□ -1.89
USB1YLR132C AIM23P47015 356 aa3.27□□□□□ -1.89
USB1YLR132C YLR177WQ06251 628 aa3.27□□□□□ -1.89
USB1YLR132C RTC5Q12108 567 aaKnown RBP3.27□□□□□ -1.89
USB1YLR132C SPO24Q3E752 67 aa3.27□□□□□ -1.89
USB1YLR132C RBK1P25332 333 aa3.26□□□□□ -1.89
USB1YLR132C RSA4P25382 515 aaKnown RBP3.26□□□□□ -1.89
USB1YLR132C ERG9P29704 444 aa3.26□□□□□ -1.89
USB1YLR132C ZUO1P32527 433 aaKnown RBP3.26□□□□□ -1.89
USB1YLR132C IML3P38265 245 aa3.26□□□□□ -1.89
USB1YLR132C PEX32P38292 413 aa3.26□□□□□ -1.89
USB1YLR132C LIN1P38852 340 aaPredicted RBP3.26□□□□□ -1.89
USB1YLR132C BTT1P40314 149 aaPredicted RBP3.26□□□□□ -1.89
USB1YLR132C RNH201P53942 307 aa3.26□□□□□ -1.89
USB1YLR132C BUR2Q05949 395 aa3.26□□□□□ -1.89
USB1YLR132C ATP16Q12165 160 aa3.26□□□□□ -1.89
USB1YLR132C YDR262WQ12331 272 aa3.26□□□□□ -1.89
USB1YLR132C HAP2P06774 265 aa3.25□□□□□ -1.89
USB1YLR132C UNG1P12887 359 aa3.25□□□□□ -1.89
USB1YLR132C GAL3P13045 520 aa3.25□□□□□ -1.89
USB1YLR132C UTR1P21373 530 aa3.25□□□□□ -1.89
USB1YLR132C PEX34P25584 144 aa3.25□□□□□ -1.89
USB1YLR132C ITR2P30606 609 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms