RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C MIC19P43594 170 aa2.32□□□□□ -2.04
YPT52YKR014C YGR168CP53293 376 aa2.32□□□□□ -2.04
YPT52YKR014C HCH1P53834 153 aa2.32□□□□□ -2.04
YPT52YKR014C SCS7Q03529 384 aa2.32□□□□□ -2.04
YPT52YKR014C RVB1Q03940 463 aaKnown RBP2.32□□□□□ -2.04
YPT52YKR014C TAF10Q12030 206 aa2.32□□□□□ -2.04
YPT52YKR014C MHP1P43638 1398 aa2.32□□□□□ -2.04
YPT52YKR014C RPL18AP0CX49 186 aaKnown RBP2.31□□□□□ -2.04
YPT52YKR014C RPL18BP0CX50 186 aaKnown RBP2.31□□□□□ -2.04
YPT52YKR014C CTA1P15202 515 aa2.31□□□□□ -2.04
YPT52YKR014C CPT1P17898 393 aa2.31□□□□□ -2.04
YPT52YKR014C COX10P21592 462 aa2.31□□□□□ -2.04
YPT52YKR014C RBK1P25332 333 aa2.31□□□□□ -2.04
YPT52YKR014C ITR2P30606 609 aa2.31□□□□□ -2.04
YPT52YKR014C VMA5P31412 392 aaKnown RBP2.31□□□□□ -2.04
YPT52YKR014C IML3P38265 245 aa2.31□□□□□ -2.04
YPT52YKR014C ASG7P46993 209 aa2.31□□□□□ -2.04
YPT52YKR014C TAF6P53040 516 aa2.31□□□□□ -2.04
YPT52YKR014C VOA1P53262 265 aa2.31□□□□□ -2.04
YPT52YKR014C DBP6P53734 629 aaKnown RBP2.31□□□□□ -2.04
YPT52YKR014C ERV25P54837 211 aaKnown RBP2.31□□□□□ -2.04
YPT52YKR014C INP1Q03694 420 aa2.31□□□□□ -2.04
YPT52YKR014C CUR1Q06469 252 aa2.31□□□□□ -2.04
YPT52YKR014C YIL002W-AQ3E7Z5 69 aa2.31□□□□□ -2.04
YPT52YKR014C DBP3P20447 523 aaKnown RBP2.3□□□□□ -2.04
YPT52YKR014C BUD2P33314 1104 aa2.3□□□□□ -2.04
YPT52YKR014C KTI12P34253 313 aaKnown RBP2.3□□□□□ -2.04
YPT52YKR014C YMR262WP38430 313 aa2.3□□□□□ -2.04
YPT52YKR014C SPO73P40031 143 aa2.3□□□□□ -2.04
YPT52YKR014C UTP25P40498 721 aaKnown RBP2.3□□□□□ -2.04
YPT52YKR014C YCH1P42937 148 aa2.3□□□□□ -2.04
YPT52YKR014C RIB4P50861 169 aaPredicted RBP2.3□□□□□ -2.04
YPT52YKR014C PXR1P53335 271 aaPredicted RBP2.3□□□□□ -2.04
YPT52YKR014C RRG8Q06109 277 aa2.3□□□□□ -2.04
YPT52YKR014C YDR018CQ12185 396 aa2.3□□□□□ -2.04
YPT52YKR014C YPR1Q12458 312 aa2.3□□□□□ -2.04
YPT52YKR014C CAR2P07991 424 aaKnown RBP2.29□□□□□ -2.04
YPT52YKR014C GAL7P08431 366 aa2.29□□□□□ -2.04
YPT52YKR014C DAL5P15365 543 aa2.29□□□□□ -2.04
YPT52YKR014C MSS116P15424 664 aaKnown RBP2.29□□□□□ -2.04
YPT52YKR014C SAR1P20606 190 aaKnown RBP2.29□□□□□ -2.04
YPT52YKR014C DCC1P25559 380 aa2.29□□□□□ -2.04
YPT52YKR014C LOC1P43586 204 aaPredicted RBP2.29□□□□□ -2.04
YPT52YKR014C LOH1P47055 219 aa2.29□□□□□ -2.04
YPT52YKR014C SMD1Q02260 146 aaPredicted RBP2.29□□□□□ -2.04
YPT52YKR014C EGD1Q02642 157 aaKnown RBP2.29□□□□□ -2.04
YPT52YKR014C VAC14Q06708 880 aa2.29□□□□□ -2.04
YPT52YKR014C RPN6Q12377 434 aa2.29□□□□□ -2.04
YPT52YKR014C DCP1Q12517 231 aaPredicted RBP2.29□□□□□ -2.04
YPT52YKR014C ACB1P31787 87 aa2.28□□□□□ -2.04
YPT52YKR014C ZRT3P34240 503 aa2.28□□□□□ -2.04
YPT52YKR014C EBP2P36049 427 aaKnown RBP2.28□□□□□ -2.04
YPT52YKR014C RFT1P38206 574 aaPredicted RBP2.28□□□□□ -2.04
YPT52YKR014C MMS21P38632 267 aa2.28□□□□□ -2.04
YPT52YKR014C SMF2P38778 549 aa2.28□□□□□ -2.04
YPT52YKR014C FET3P38993 636 aa2.28□□□□□ -2.04
YPT52YKR014C RTT105P40063 208 aa2.28□□□□□ -2.04
YPT52YKR014C INA22P40576 216 aa2.28□□□□□ -2.04
YPT52YKR014C YJL144WP47009 104 aa2.28□□□□□ -2.04
YPT52YKR014C PNC1P53184 216 aaKnown RBP2.28□□□□□ -2.04
YPT52YKR014C FMP48P53233 369 aa2.28□□□□□ -2.04
YPT52YKR014C YLR413WQ06689 675 aa2.28□□□□□ -2.04
YPT52YKR014C DTD1Q07648 150 aaKnown RBP2.28□□□□□ -2.04
YPT52YKR014C PAA1Q12447 191 aaKnown RBP2.28□□□□□ -2.04
YPT52YKR014C MRPL23Q12487 163 aaPredicted RBP2.28□□□□□ -2.04
YPT52YKR014C UGA1P17649 471 aa2.27□□□□□ -2.05
YPT52YKR014C MEI5P32489 222 aa2.27□□□□□ -2.05
YPT52YKR014C CBF5P33322 483 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
YPT52YKR014C YKL162CP36052 402 aa2.27□□□□□ -2.05
YPT52YKR014C DSE1P40077 573 aa2.27□□□□□ -2.05
YPT52YKR014C GCD14P46959 383 aaPredicted RBP2.27□□□□□ -2.05
YPT52YKR014C CAX4P53223 239 aa2.27□□□□□ -2.05
YPT52YKR014C SPO19Q03029 223 aa2.27□□□□□ -2.05
YPT52YKR014C YMR244WQ04018 355 aa2.27□□□□□ -2.05
YPT52YKR014C UBX2Q04228 584 aa2.27□□□□□ -2.05
YPT52YKR014C SAM4Q08985 325 aaKnown RBP2.27□□□□□ -2.05
YPT52YKR014C DFM1Q12743 341 aaKnown RBP2.27□□□□□ -2.05
YPT52YKR014C INO80P53115 1489 aa2.26□□□□□ -2.05
YPT52YKR014C RAD7P06779 565 aa2.26□□□□□ -2.05
YPT52YKR014C HPR1P17629 752 aaKnown RBP2.26□□□□□ -2.05
YPT52YKR014C RPL5P26321 297 aaKnown RBP2.26□□□□□ -2.05
YPT52YKR014C PPQ1P32945 549 aa2.26□□□□□ -2.05
YPT52YKR014C RIB7P33312 244 aa2.26□□□□□ -2.05
YPT52YKR014C YKL187CP34231 750 aa2.26□□□□□ -2.05
YPT52YKR014C RPC25P35718 212 aa2.26□□□□□ -2.05
YPT52YKR014C RCK1P38622 512 aa2.26□□□□□ -2.05
YPT52YKR014C CDC40P40968 455 aaPredicted RBP2.26□□□□□ -2.05
YPT52YKR014C YGL118CP53132 145 aa2.26□□□□□ -2.05
YPT52YKR014C YPL080CQ02826 108 aa2.26□□□□□ -2.05
YPT52YKR014C YMR111CQ04461 462 aaPredicted RBP2.26□□□□□ -2.05
YPT52YKR014C ECM18Q04623 453 aa2.26□□□□□ -2.05
YPT52YKR014C ECM19Q06011 112 aa2.26□□□□□ -2.05
YPT52YKR014C DIB1Q06819 143 aaPredicted RBP2.26□□□□□ -2.05
YPT52YKR014C OM45P16547 393 aa2.25□□□□□ -2.05
YPT52YKR014C ZRT1P32804 376 aa2.25□□□□□ -2.05
YPT52YKR014C CTM1P38818 585 aa2.25□□□□□ -2.05
YPT52YKR014C PEX18P38855 283 aa2.25□□□□□ -2.05
YPT52YKR014C VPS45P38932 577 aa2.25□□□□□ -2.05
YPT52YKR014C RRG9P40156 214 aa2.25□□□□□ -2.05
YPT52YKR014C SLM1P40485 686 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms