RNA–Protein interactions for RNA: YIL038C

NOT3, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeast

Gene NOT3, Length 2,511 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOT3	YIL038C	BUD17	P53727	317 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	SWS2	P53937	143 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	AQR1	P53943	586 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	YDR179W-A	Q03983	463 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	ARP10	Q04549	284 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	RTC5	Q12108	567 aa	Known RBP	4.82	□□□□□ -1.64
NOT3	YIL038C	NAG1	Q8TGN9	163 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	REP1	P03871	373 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	TRP4	P07285	380 aa	Predicted RBP	4.82	□□□□□ -1.64
NOT3	YIL038C	RPB5	P20434	215 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	GRR1	P24814	1151 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	TAH1	P25638	111 aa	Predicted RBP	4.82	□□□□□ -1.64
NOT3	YIL038C	ERG1	P32476	496 aa	Known RBP	4.82	□□□□□ -1.64
NOT3	YIL038C	SEC17	P32602	292 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	HIS7	P33734	552 aa	Known RBP	4.82	□□□□□ -1.64
NOT3	YIL038C	TUL1	P36096	758 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	IMD2	P38697	523 aa	Known RBP	4.82	□□□□□ -1.64
NOT3	YIL038C	DED81	P38707	554 aa	Known RBP	4.82	□□□□□ -1.64
NOT3	YIL038C	YHR177W	P38867	453 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	YJL163C	P46996	555 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	RPS12	P48589	143 aa	Known RBP	4.82	□□□□□ -1.64
NOT3	YIL038C	EOS1	P53938	366 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	ERG13	P54839	491 aa	Known RBP	4.82	□□□□□ -1.64
NOT3	YIL038C	RIM13	Q03792	727 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	YLR224W	Q05947	369 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	GSH2	Q08220	491 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	RPN8	Q08723	338 aa	Known RBP	4.82	□□□□□ -1.64
NOT3	YIL038C	YOR365C	Q08844	703 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	RRP12	Q12754	1228 aa	Known RBP	4.82	□□□□□ -1.64
NOT3	YIL038C	DFG16	Q99234	619 aa		4.82	□□□□□ -1.64
NOT3	YIL038C	YBR085C-A	O43137	85 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	SPT15	P13393	240 aa	Known RBP	4.81	□□□□□ -1.64
NOT3	YIL038C	PTP1	P25044	335 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	SDH3	P33421	198 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	YKL097C	P34245	136 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	RRP3	P38712	501 aa	Known RBP	4.81	□□□□□ -1.64
NOT3	YIL038C	TDA11	P38854	504 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	YER184C	P39961	794 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	MIT1	P40002	666 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	KRE29	P40026	464 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	YGL235W	P53071	178 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	YGR168C	P53293	376 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	DCP2	P53550	970 aa	Known RBP	4.81	□□□□□ -1.64
NOT3	YIL038C	RSC9	Q03124	581 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	ARR1	Q06596	294 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	MSH5	Q12175	901 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	RKM5	Q12367	367 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	COR1	P07256	457 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	RPL3	P14126	387 aa	Known RBP	4.81	□□□□□ -1.64
NOT3	YIL038C	PDA1	P16387	420 aa	Known RBP	4.81	□□□□□ -1.64
NOT3	YIL038C	PPH21	P23594	369 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	SRX1	P36077	127 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	YPK3	P38070	525 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	IRC7	P43623	340 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	YGL101W	P53144	215 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	YDR061W	Q12298	539 aa		4.81	□□□□□ -1.64
NOT3	YIL038C	STF1	P01098	86 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
NOT3	YIL038C	GDH2	P33327	1092 aa	Known RBP	4.8	□□□□□ -1.64
NOT3	YIL038C	YBR144C	P34215	104 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	MRPL15	P36523	253 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	TAE1	P38340	232 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	RHO4	Q00246	291 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	NEJ1	Q06148	342 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	HNT3	Q08702	217 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	RKM1	Q08961	583 aa	Predicted RBP	4.8	□□□□□ -1.64
NOT3	YIL038C	YOR114W	Q12219	294 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	PST2	Q12335	198 aa	Known RBP	4.8	□□□□□ -1.64
NOT3	YIL038C	IES3	Q12345	250 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	SAG1	P20840	650 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	RPS5	P26783	225 aa	Known RBP	4.8	□□□□□ -1.64
NOT3	YIL038C	OMA1	P36163	345 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	MED6	P38782	295 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	STD1	Q02794	444 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	LOT6	Q07923	191 aa		4.8	□□□□□ -1.64
NOT3	YIL038C	DEF1	P35732	738 aa	Known RBP	4.79	□□□□□ -1.64
NOT3	YIL038C	PHM8	P40025	321 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	ALK1	P43633	760 aa	Known RBP	4.79	□□□□□ -1.64
NOT3	YIL038C	MSE1	P48525	536 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	SED5	Q01590	340 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	FDH1	Q08911	376 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	FMP40	Q08968	688 aa	Predicted RBP	4.79	□□□□□ -1.64
NOT3	YIL038C	SLH1	P53327	1967 aa	Known RBP	4.79	□□□□□ -1.64
NOT3	YIL038C	RHO1	P06780	209 aa	Known RBP	4.79	□□□□□ -1.64
NOT3	YIL038C	SEC62	P21825	274 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	VPS17	P32913	551 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	TAF14	P35189	244 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	BNA4	P38169	460 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	EGD2	P38879	174 aa	Known RBP	4.79	□□□□□ -1.64
NOT3	YIL038C	VHS2	P40463	436 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	PKP1	P40530	394 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	COS10	P52924	374 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	YGR067C	P53243	804 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	YDL211C	Q12121	372 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	YPR022C	Q12139	1133 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	BSC1	Q12140	328 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	SET6	Q12529	373 aa		4.79	□□□□□ -1.64
NOT3	YIL038C	DST1	P07273	309 aa		4.78	□□□□□ -1.64
NOT3	YIL038C	MER1	P16523	270 aa		4.78	□□□□□ -1.64
NOT3	YIL038C	MCK1	P21965	375 aa	Known RBP	4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 30 ms