RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA7, Length 357 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA7YGR020C HRT1Q08273 121 aa2.5□□□□□ -2.01
VMA7YGR020C YDR262WQ12331 272 aa2.5□□□□□ -2.01
VMA7YGR020C DAL5P15365 543 aa2.49□□□□□ -2.01
VMA7YGR020C HPR1P17629 752 aaKnown RBP2.49□□□□□ -2.01
VMA7YGR020C MRPL20P22354 195 aaPredicted RBP2.49□□□□□ -2.01
VMA7YGR020C ACB1P31787 87 aa2.49□□□□□ -2.01
VMA7YGR020C SWI3P32591 825 aa2.49□□□□□ -2.01
VMA7YGR020C BUD2P33314 1104 aa2.49□□□□□ -2.01
VMA7YGR020C CTM1P38818 585 aa2.49□□□□□ -2.01
VMA7YGR020C BUR2Q05949 395 aa2.49□□□□□ -2.01
VMA7YGR020C INO2P26798 304 aa2.48□□□□□ -2.01
VMA7YGR020C VPH1P32563 840 aaKnown RBP2.48□□□□□ -2.01
VMA7YGR020C SMI1P32566 505 aa2.48□□□□□ -2.01
VMA7YGR020C BLI1P35727 113 aa2.48□□□□□ -2.01
VMA7YGR020C ECM14P38836 430 aa2.48□□□□□ -2.01
VMA7YGR020C TRM10Q12400 293 aa2.48□□□□□ -2.01
VMA7YGR020C TFC7Q12415 435 aa2.48□□□□□ -2.01
VMA7YGR020C LIN1P38852 340 aaPredicted RBP2.47□□□□□ -2.01
VMA7YGR020C ASP1P38986 381 aaPredicted RBP2.47□□□□□ -2.01
VMA7YGR020C YGR016WP53209 190 aa2.47□□□□□ -2.01
VMA7YGR020C YLR012CQ07927 99 aa2.47□□□□□ -2.01
VMA7YGR020C YPL264CQ08980 353 aa2.47□□□□□ -2.01
VMA7YGR020C YPL245WQ12179 454 aaKnown RBP2.47□□□□□ -2.01
VMA7YGR020C RNR2P09938 399 aaKnown RBP2.46□□□□□ -2.02
VMA7YGR020C ERD1P16151 362 aa2.46□□□□□ -2.02
VMA7YGR020C UIP5P36137 443 aa2.46□□□□□ -2.02
VMA7YGR020C PET8P38921 284 aa2.46□□□□□ -2.02
VMA7YGR020C FYV8P46949 817 aaKnown RBP2.46□□□□□ -2.02
VMA7YGR020C YGR168CP53293 376 aa2.46□□□□□ -2.02
VMA7YGR020C YNR066CP53752 436 aa2.46□□□□□ -2.02
VMA7YGR020C GTO3Q04806 366 aa2.46□□□□□ -2.02
VMA7YGR020C YPR063CQ12160 140 aa2.46□□□□□ -2.02
VMA7YGR020C SPT7P35177 1332 aa2.45□□□□□ -2.02
VMA7YGR020C TKL2P33315 681 aa2.45□□□□□ -2.02
VMA7YGR020C NAS2P40555 220 aa2.45□□□□□ -2.02
VMA7YGR020C UBX2Q04228 584 aa2.45□□□□□ -2.02
VMA7YGR020C CSI1Q04368 295 aa2.45□□□□□ -2.02
VMA7YGR020C YDR222WQ04925 415 aa2.45□□□□□ -2.02
VMA7YGR020C CBP2P03874 630 aaPredicted RBP2.44□□□□□ -2.02
VMA7YGR020C RPL18AP0CX49 186 aaKnown RBP2.44□□□□□ -2.02
VMA7YGR020C RPL18BP0CX50 186 aaKnown RBP2.44□□□□□ -2.02
VMA7YGR020C GAL3P13045 520 aa2.44□□□□□ -2.02
VMA7YGR020C ARO4P32449 370 aaKnown RBP2.44□□□□□ -2.02
VMA7YGR020C SUR1P33300 382 aa2.44□□□□□ -2.02
VMA7YGR020C ACT1P60010 375 aaKnown RBP2.44□□□□□ -2.02
VMA7YGR020C SGT2Q12118 346 aaKnown RBP2.44□□□□□ -2.02
VMA7YGR020C ERP3Q12403 225 aa2.44□□□□□ -2.02
VMA7YGR020C ALK2P32789 676 aaPredicted RBP2.43□□□□□ -2.02
VMA7YGR020C SDH4P37298 181 aa2.43□□□□□ -2.02
VMA7YGR020C MED8P38304 223 aa2.43□□□□□ -2.02
VMA7YGR020C SMC2P38989 1170 aaKnown RBP2.43□□□□□ -2.02
VMA7YGR020C EDC2P40023 145 aaPredicted RBP2.43□□□□□ -2.02
VMA7YGR020C BUD13P46947 266 aaPredicted RBP2.43□□□□□ -2.02
VMA7YGR020C IRC4Q03036 179 aa2.43□□□□□ -2.02
VMA7YGR020C DXO1Q06349 442 aa2.43□□□□□ -2.02
VMA7YGR020C IES3Q12345 250 aa2.43□□□□□ -2.02
VMA7YGR020C DAL81P21657 970 aa2.42□□□□□ -2.02
VMA7YGR020C PPQ1P32945 549 aa2.42□□□□□ -2.02
VMA7YGR020C CSE1P33307 960 aa2.42□□□□□ -2.02
VMA7YGR020C SOP4P39543 234 aaPredicted RBP2.42□□□□□ -2.02
VMA7YGR020C YFR045WP43617 309 aa2.42□□□□□ -2.02
VMA7YGR020C SHE4P51534 789 aa2.42□□□□□ -2.02
VMA7YGR020C YGL088WP53151 121 aa2.42□□□□□ -2.02
VMA7YGR020C YOR292CQ08743 309 aa2.42□□□□□ -2.02
VMA7YGR020C VIK1Q12045 647 aa2.42□□□□□ -2.02
VMA7YGR020C YHR035WP38769 630 aa2.41□□□□□ -2.02
VMA7YGR020C UTP25P40498 721 aaKnown RBP2.41□□□□□ -2.02
VMA7YGR020C INA22P40576 216 aa2.41□□□□□ -2.02
VMA7YGR020C YFL040WP43562 540 aa2.41□□□□□ -2.02
VMA7YGR020C ECO1P43605 281 aa2.41□□□□□ -2.02
VMA7YGR020C HSH155P49955 971 aaKnown RBP2.41□□□□□ -2.02
VMA7YGR020C YNL040WP53960 456 aaPredicted RBP2.41□□□□□ -2.02
VMA7YGR020C YPL113CQ02961 396 aa2.41□□□□□ -2.02
VMA7YGR020C SNX41Q04053 625 aa2.41□□□□□ -2.02
VMA7YGR020C STE23Q06010 1027 aa2.41□□□□□ -2.02
VMA7YGR020C MIG1P27705 504 aa2.4□□□□□ -2.03
VMA7YGR020C YPS1P32329 569 aa2.4□□□□□ -2.03
VMA7YGR020C UTR5P32630 166 aa2.4□□□□□ -2.03
VMA7YGR020C ZRT1P32804 376 aa2.4□□□□□ -2.03
VMA7YGR020C AIM29P36154 155 aa2.4□□□□□ -2.03
VMA7YGR020C YPL080CQ02826 108 aa2.4□□□□□ -2.03
VMA7YGR020C SEC13Q04491 297 aaKnown RBP2.4□□□□□ -2.03
VMA7YGR020C YDR114CQ04597 100 aa2.4□□□□□ -2.03
VMA7YGR020C RLP24Q07915 199 aaKnown RBP2.4□□□□□ -2.03
VMA7YGR020C UTP23Q12339 254 aaKnown RBP2.4□□□□□ -2.03
VMA7YGR020C MET2P08465 486 aa2.39□□□□□ -2.03
VMA7YGR020C CAJ1P39101 391 aa2.39□□□□□ -2.03
VMA7YGR020C OKP1P53298 406 aa2.39□□□□□ -2.03
VMA7YGR020C YDR286CQ05530 114 aa2.39□□□□□ -2.03
VMA7YGR020C LAG2Q92325 660 aa2.39□□□□□ -2.03
VMA7YGR020C TDH3P00359 332 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
VMA7YGR020C CDC42P19073 191 aa2.38□□□□□ -2.03
VMA7YGR020C VPH2P32341 215 aa2.38□□□□□ -2.03
VMA7YGR020C MRPL6P32904 214 aa2.38□□□□□ -2.03
VMA7YGR020C GPX1P36014 167 aa2.38□□□□□ -2.03
VMA7YGR020C YKL162CP36052 402 aa2.38□□□□□ -2.03
VMA7YGR020C UFD1P53044 361 aa2.38□□□□□ -2.03
VMA7YGR020C ARC18Q05933 178 aaKnown RBP2.38□□□□□ -2.03
VMA7YGR020C YLR446WQ06204 433 aa2.38□□□□□ -2.03
VMA7YGR020C PGC1Q08959 321 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms