RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	YNR068C	P53754	272 aa		1.62	□□□□□ -2.15
DOT6	YER088C	REX2	P54964	269 aa	Known RBP	1.62	□□□□□ -2.15
DOT6	YER088C	TPS1	Q00764	495 aa	Known RBP	1.62	□□□□□ -2.15
DOT6	YER088C	AIM33	Q04516	312 aa		1.62	□□□□□ -2.15
DOT6	YER088C	MSC3	Q05812	728 aa		1.62	□□□□□ -2.15
DOT6	YER088C	CUR1	Q06469	252 aa		1.62	□□□□□ -2.15
DOT6	YER088C	HTZ1	Q12692	134 aa	Known RBP	1.62	□□□□□ -2.15
DOT6	YER088C	DET1	Q99288	334 aa	Known RBP	1.62	□□□□□ -2.15
DOT6	YER088C	HEM4	P06174	275 aa		1.61	□□□□□ -2.15
DOT6	YER088C	UBA1	P22515	1024 aa	Known RBP	1.61	□□□□□ -2.15
DOT6	YER088C	CMK2	P22517	447 aa		1.61	□□□□□ -2.15
DOT6	YER088C	GRR1	P24814	1151 aa		1.61	□□□□□ -2.15
DOT6	YER088C	ZUO1	P32527	433 aa	Known RBP	1.61	□□□□□ -2.15
DOT6	YER088C	BMH2	P34730	273 aa	Known RBP	1.61	□□□□□ -2.15
DOT6	YER088C	SRX1	P36077	127 aa		1.61	□□□□□ -2.15
DOT6	YER088C	GPI18	P38211	433 aa		1.61	□□□□□ -2.15
DOT6	YER088C	ATG12	P38316	186 aa		1.61	□□□□□ -2.15
DOT6	YER088C	IGD1	P43598	195 aa		1.61	□□□□□ -2.15
DOT6	YER088C	AIP1	P46680	615 aa	Known RBP	1.61	□□□□□ -2.15
DOT6	YER088C	TRF5	P48561	642 aa	Known RBP	1.61	□□□□□ -2.15
DOT6	YER088C	CUE3	P53137	624 aa	Known RBP	1.61	□□□□□ -2.15
DOT6	YER088C	ENT5	Q03769	411 aa	Known RBP	1.61	□□□□□ -2.15
DOT6	YER088C	TAF10	Q12030	206 aa		1.61	□□□□□ -2.15
DOT6	YER088C	YOL085C	Q99345	113 aa		1.61	□□□□□ -2.15
DOT6	YER088C	MRPL8	P22353	238 aa		1.61	□□□□□ -2.15
DOT6	YER088C	PMT2	P31382	759 aa		1.61	□□□□□ -2.15
DOT6	YER088C	MSK1	P32048	576 aa		1.61	□□□□□ -2.15
DOT6	YER088C	MRPL40	P36534	297 aa		1.61	□□□□□ -2.15
DOT6	YER088C	CHL4	P38907	458 aa		1.61	□□□□□ -2.15
DOT6	YER088C	LYS12	P40495	371 aa	Known RBP	1.61	□□□□□ -2.15
DOT6	YER088C	YGL262W	P53054	175 aa		1.61	□□□□□ -2.15
DOT6	YER088C	FLC3	P53121	802 aa		1.61	□□□□□ -2.15
DOT6	YER088C	ALF1	P53904	254 aa		1.61	□□□□□ -2.15
DOT6	YER088C	YLR177W	Q06251	628 aa		1.61	□□□□□ -2.15
DOT6	YER088C	SGT2	Q12118	346 aa	Known RBP	1.61	□□□□□ -2.15
DOT6	YER088C	ATP16	Q12165	160 aa		1.61	□□□□□ -2.15
DOT6	YER088C	FRE6	Q12473	712 aa		1.61	□□□□□ -2.15
DOT6	YER088C	YIL046W-A	Q3E7Z4	54 aa		1.61	□□□□□ -2.15
DOT6	YER088C	TPI1	P00942	248 aa	Known RBP	1.6	□□□□□ -2.15
DOT6	YER088C	RPL6B	P05739	176 aa	Known RBP	1.6	□□□□□ -2.15
DOT6	YER088C	STE7	P06784	515 aa		1.6	□□□□□ -2.15
DOT6	YER088C	RPL23A	P0CX41	137 aa	Known RBP	1.6	□□□□□ -2.15
DOT6	YER088C	RPL23B	P0CX42	137 aa	Known RBP	1.6	□□□□□ -2.15
DOT6	YER088C	THR4	P16120	514 aa	Known RBP	1.6	□□□□□ -2.15
DOT6	YER088C	RPL16A	P26784	199 aa	Known RBP	1.6	□□□□□ -2.15
DOT6	YER088C	PDC2	P32896	925 aa		1.6	□□□□□ -2.15
DOT6	YER088C	TKL2	P33315	681 aa		1.6	□□□□□ -2.15
DOT6	YER088C	DAD2	P36162	133 aa		1.6	□□□□□ -2.15
DOT6	YER088C	SHE3	P38272	425 aa	Known RBP	1.6	□□□□□ -2.15
DOT6	YER088C	ERG10	P41338	398 aa	Known RBP	1.6	□□□□□ -2.15
DOT6	YER088C	EFM3	P47163	339 aa		1.6	□□□□□ -2.15
DOT6	YER088C	RPL6A	Q02326	176 aa	Known RBP	1.6	□□□□□ -2.15
DOT6	YER088C	CWC21	Q03375	135 aa	Known RBP	1.6	□□□□□ -2.15
DOT6	YER088C	SMD2	Q06217	110 aa	Known RBP	1.6	□□□□□ -2.15
DOT6	YER088C	SHS1	Q07657	551 aa		1.6	□□□□□ -2.15
DOT6	YER088C	CLP1	Q08685	445 aa	Predicted RBP	1.6	□□□□□ -2.15
DOT6	YER088C	YOR012W	Q12351	137 aa		1.6	□□□□□ -2.15
DOT6	YER088C	TFB5	Q3E7C1	72 aa	Predicted RBP	1.6	□□□□□ -2.15
DOT6	YER088C	UNG1	P12887	359 aa		1.59	□□□□□ -2.15
DOT6	YER088C	CKA2	P19454	339 aa		1.59	□□□□□ -2.15
DOT6	YER088C	RDS1	P25611	832 aa		1.59	□□□□□ -2.15
DOT6	YER088C	SSE1	P32589	693 aa	Known RBP	1.59	□□□□□ -2.15
DOT6	YER088C	SHE1	P38200	338 aa		1.59	□□□□□ -2.15
DOT6	YER088C	SIF2	P38262	535 aa		1.59	□□□□□ -2.15
DOT6	YER088C	APE4	P38821	490 aa		1.59	□□□□□ -2.15
DOT6	YER088C	YHR122W	P38829	231 aa		1.59	□□□□□ -2.15
DOT6	YER088C	WSS1	P38838	269 aa		1.59	□□□□□ -2.15
DOT6	YER088C	ATG7	P38862	630 aa		1.59	□□□□□ -2.15
DOT6	YER088C	FHL1	P39521	936 aa		1.59	□□□□□ -2.15
DOT6	YER088C	SHQ1	P40486	507 aa	Predicted RBP	1.59	□□□□□ -2.15
DOT6	YER088C	AIM23	P47015	356 aa		1.59	□□□□□ -2.15
DOT6	YER088C	MKC7	P53379	596 aa		1.59	□□□□□ -2.15
DOT6	YER088C	RSM10	Q03201	203 aa		1.59	□□□□□ -2.15
DOT6	YER088C	SCS7	Q03529	384 aa		1.59	□□□□□ -2.15
DOT6	YER088C	GPM2	Q12008	311 aa		1.59	□□□□□ -2.15
DOT6	YER088C	YDL109C	Q12103	647 aa		1.59	□□□□□ -2.15
DOT6	YER088C	YDR061W	Q12298	539 aa		1.59	□□□□□ -2.15
DOT6	YER088C	MSF1	P08425	469 aa		1.59	□□□□□ -2.16
DOT6	YER088C	ASP3-2	P0CX77	362 aa		1.59	□□□□□ -2.16
DOT6	YER088C	ASP3-3	P0CX78	362 aa		1.59	□□□□□ -2.16
DOT6	YER088C	ASP3-4	P0CX79	362 aa		1.59	□□□□□ -2.16
DOT6	YER088C	ASP3-1	P0CZ17	362 aa		1.59	□□□□□ -2.16
DOT6	YER088C	MIR1	P23641	311 aa	Known RBP	1.59	□□□□□ -2.16
DOT6	YER088C	EFB1	P32471	206 aa	Known RBP	1.59	□□□□□ -2.16
DOT6	YER088C	YKR015C	P36111	568 aa		1.59	□□□□□ -2.16
DOT6	YER088C	MRPS9	P38120	278 aa		1.59	□□□□□ -2.16
DOT6	YER088C	SMP1	P38128	452 aa		1.59	□□□□□ -2.16
DOT6	YER088C	RCK2	P38623	610 aa		1.59	□□□□□ -2.16
DOT6	YER088C	YJR054W	P47114	497 aa		1.59	□□□□□ -2.16
DOT6	YER088C	YGR015C	P53208	328 aa		1.59	□□□□□ -2.16
DOT6	YER088C	LST7	P53237	242 aa		1.59	□□□□□ -2.16
DOT6	YER088C	NRM1	P53718	249 aa		1.59	□□□□□ -2.16
DOT6	YER088C	PGA2	P53903	129 aa		1.59	□□□□□ -2.16
DOT6	YER088C	SUR7	P54003	302 aa		1.59	□□□□□ -2.16
DOT6	YER088C	RMI1	Q02685	241 aa		1.59	□□□□□ -2.16
DOT6	YER088C	RPL21A	Q02753	160 aa	Known RBP	1.59	□□□□□ -2.16
DOT6	YER088C	VHS1	Q03785	461 aa		1.59	□□□□□ -2.16
DOT6	YER088C	NKP2	Q06162	153 aa		1.59	□□□□□ -2.16
DOT6	YER088C	PEX27	Q08580	376 aa		1.59	□□□□□ -2.16
DOT6	YER088C	RPL21B	Q12672	160 aa	Known RBP	1.59	□□□□□ -2.16

Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms