RNA–Protein interactions for RNA: YDR337W

MRPS28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene MRPS28, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	YDR337W	ECL1	P48235	211 aa		6.09	□□□□□ -1.43
MRPS28	YDR337W	BRR6	P53062	197 aa		6.09	□□□□□ -1.43
MRPS28	YDR337W	MAL12	P53341	584 aa		6.09	□□□□□ -1.43
MRPS28	YDR337W	ATG21	Q02887	496 aa		6.09	□□□□□ -1.43
MRPS28	YDR337W	CGI121	Q03705	181 aa	Known RBP	6.09	□□□□□ -1.43
MRPS28	YDR337W	COX20	Q04935	205 aa		6.09	□□□□□ -1.43
MRPS28	YDR337W	RBS1	Q05672	457 aa	Known RBP	6.09	□□□□□ -1.43
MRPS28	YDR337W	YPR109W	Q06104	294 aa		6.09	□□□□□ -1.43
MRPS28	YDR337W	COQ10	Q08058	207 aa		6.09	□□□□□ -1.43
MRPS28	YDR337W	RRG7	Q08774	242 aa	Predicted RBP	6.09	□□□□□ -1.43
MRPS28	YDR337W	YOR376W	Q08900	122 aa		6.09	□□□□□ -1.43
MRPS28	YDR337W	CDC31	P06704	161 aa	Known RBP	6.08	□□□□□ -1.44
MRPS28	YDR337W	CPR2	P23285	205 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	RAD51	P25454	400 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	TRS65	P32893	560 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	MSN4	P33749	630 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	SDS22	P36047	338 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	AMN1	P38285	549 aa	Predicted RBP	6.08	□□□□□ -1.44
MRPS28	YDR337W	OM14	P38325	134 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	VBA2	P38358	474 aa	Known RBP	6.08	□□□□□ -1.44
MRPS28	YDR337W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	6.08	□□□□□ -1.44	not detected
MRPS28	YDR337W	MIT1	P40002	666 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	HIS6	P40545	261 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	YJL218W	P40892	196 aa	Known RBP	6.08	□□□□□ -1.44
MRPS28	YDR337W	CWC23	P52868	283 aa	Predicted RBP	6.08	□□□□□ -1.44
MRPS28	YDR337W	PPT1	P53043	513 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	IMO32	P53219	342 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	VOA1	P53262	265 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	YDR249C	Q03787	373 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	GIS1	Q03833	894 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	SPC19	Q03954	165 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	BUR2	Q05949	395 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	GPN3	Q06543	272 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	IPK1	Q06667	281 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	NGL1	Q08213	363 aa	Known RBP	6.08	□□□□□ -1.44
MRPS28	YDR337W	PEX27	Q08580	376 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	YOR378W	Q08902	515 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	YDL176W	Q12027	708 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	YRA1	Q12159	226 aa	Known RBP	6.08	□□□□□ -1.44
MRPS28	YDR337W	YOL114C	Q12322	202 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	YPR1	Q12458	312 aa		6.08	□□□□□ -1.44
MRPS28	YDR337W	YGL041W-A	P0C5N3	154 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	NFT1	P0CE68	1218 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	SEC12	P11655	471 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	AHC2	P25649	128 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	ECT1	P33412	323 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	HIS7	P33734	552 aa	Known RBP	6.07	□□□□□ -1.44
MRPS28	YDR337W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
MRPS28	YDR337W	YBR063C	P38083	404 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	DTR1	P38125	572 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	CHK1	P38147	527 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	GDS1	P41913	522 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	SER2	P42941	309 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	IKS1	P47042	667 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	IMD3	P50095	523 aa	Known RBP	6.07	□□□□□ -1.44
MRPS28	YDR337W	RPA14	P50106	137 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	SAY1	P53324	424 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	MPP6	P53725	186 aa	Predicted RBP	6.07	□□□□□ -1.44
MRPS28	YDR337W	UTP21	Q06078	939 aa	Predicted RBP	6.07	□□□□□ -1.44
MRPS28	YDR337W	HNT3	Q08702	217 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	YRM1	Q12340	786 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	SWM1	Q12379	170 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	YOR343C	Q12484	108 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	SET6	Q12529	373 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	YLR099W-A	Q3E798	87 aa		6.07	□□□□□ -1.44
MRPS28	YDR337W	SLH1	P53327	1967 aa	Known RBP	6.07	□□□□□ -1.44
MRPS28	YDR337W	SIR2	P06700	562 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	CTA1	P15202	515 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	BOS1	P25385	244 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	CPR3	P25719	182 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	NAM9	P27929	486 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	FUN19	P28003	413 aa	Predicted RBP	6.06	□□□□□ -1.44
MRPS28	YDR337W	MTC2	P34246	357 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	THI2	P38141	450 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	YHK8	P38776	514 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	NAS2	P40555	220 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	NIT2	P47016	307 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	YGR066C	P53242	292 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	PAU12	P53343	120 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	NOG1	Q02892	647 aa	Known RBP	6.06	□□□□□ -1.44
MRPS28	YDR337W	PFA5	Q03289	374 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	SCS7	Q03529	384 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	YMR252C	Q04814	134 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	AIM6	Q07716	390 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	RDL2	Q08742	149 aa	Known RBP	6.06	□□□□□ -1.44
MRPS28	YDR337W	RAX1	Q08760	435 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	RLM1	Q12224	676 aa		6.06	□□□□□ -1.44
MRPS28	YDR337W	TY1A-NL1	Q12391	440 aa	Known RBP	6.06	□□□□□ -1.44
MRPS28	YDR337W	RPP2B	P02400	110 aa	Known RBP	6.05	□□□□□ -1.44
MRPS28	YDR337W	CYT1	P07143	309 aa		6.05	□□□□□ -1.44
MRPS28	YDR337W	RIP1	P08067	215 aa		6.05	□□□□□ -1.44
MRPS28	YDR337W	PRE7	P23724	241 aa	Known RBP	6.05	□□□□□ -1.44
MRPS28	YDR337W	EXG1	P23776	448 aa	Known RBP	6.05	□□□□□ -1.44
MRPS28	YDR337W	ERG8	P24521	451 aa		6.05	□□□□□ -1.44
MRPS28	YDR337W	PUT3	P25502	979 aa	Predicted RBP	6.05	□□□□□ -1.44
MRPS28	YDR337W	EHD3	P28817	500 aa		6.05	□□□□□ -1.44
MRPS28	YDR337W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	6.05	□□□□□ -1.44	not detected
MRPS28	YDR337W	SEC66	P33754	206 aa		6.05	□□□□□ -1.44
MRPS28	YDR337W	YKR073C	P36153	106 aa		6.05	□□□□□ -1.44
MRPS28	YDR337W	PAU24	P38155	120 aa		6.05	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 172.8 ms