RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W TY1A-DR3Q12441 440 aa1.9□□□□□ -2.11
SIR4YDR227W ACC1Q00955 2233 aaKnown RBP1.9□□□□□ -2.11
SIR4YDR227W CCH1P50077 2039 aa1.9□□□□□ -2.11
SIR4YDR227W PEP5P12868 1029 aa1.9□□□□□ -2.11
SIR4YDR227W SAM2P19358 384 aaKnown RBP1.9□□□□□ -2.11
SIR4YDR227W CTF13P35203 478 aa1.9□□□□□ -2.11
SIR4YDR227W NTR2P36118 322 aaPredicted RBP1.9□□□□□ -2.11
SIR4YDR227W ATG7P38862 630 aa1.9□□□□□ -2.11
SIR4YDR227W XBP1P40489 647 aa1.9□□□□□ -2.11
SIR4YDR227W NSA1P53136 463 aaPredicted RBP1.9□□□□□ -2.11
SIR4YDR227W SMM1P53720 384 aaKnown RBP1.9□□□□□ -2.11
SIR4YDR227W BUD17P53727 317 aa1.9□□□□□ -2.11
SIR4YDR227W UTP6Q02354 440 aaKnown RBP1.9□□□□□ -2.11
SIR4YDR227W SPO19Q03029 223 aa1.9□□□□□ -2.11
SIR4YDR227W ECM22Q05958 814 aaPredicted RBP1.9□□□□□ -2.11
SIR4YDR227W ABP140Q08641 628 aaKnown RBP1.9□□□□□ -2.11
SIR4YDR227W TDH2P00358 332 aaKnown RBP1.89□□□□□ -2.11
SIR4YDR227W TPK3P05986 398 aa1.89□□□□□ -2.11
SIR4YDR227W NSP1P14907 823 aaKnown RBP1.89□□□□□ -2.11
SIR4YDR227W ALG1P16661 449 aa1.89□□□□□ -2.11
SIR4YDR227W ART10P18634 518 aaKnown RBP1.89□□□□□ -2.11
SIR4YDR227W CTR86P25355 563 aa1.89□□□□□ -2.11
SIR4YDR227W YCL068CP25593 260 aa1.89□□□□□ -2.11
SIR4YDR227W FAA1P30624 700 aaKnown RBP1.89□□□□□ -2.11
SIR4YDR227W RPF2P36160 344 aaKnown RBP1.89□□□□□ -2.11
SIR4YDR227W MRPL10P36520 322 aa1.89□□□□□ -2.11
SIR4YDR227W GLG2P47011 380 aa1.89□□□□□ -2.11
SIR4YDR227W NOP19P53317 196 aaPredicted RBP1.89□□□□□ -2.11
SIR4YDR227W ASR1Q06834 288 aa1.89□□□□□ -2.11
SIR4YDR227W CYC3P06182 269 aa1.89□□□□□ -2.11
SIR4YDR227W GDH1P07262 454 aaKnown RBP1.89□□□□□ -2.11
SIR4YDR227W EXG1P23776 448 aaKnown RBP1.89□□□□□ -2.11
SIR4YDR227W CHA1P25379 360 aaKnown RBP1.89□□□□□ -2.11
SIR4YDR227W OCH1P31755 480 aa1.89□□□□□ -2.11
SIR4YDR227W YBR144CP34215 104 aa1.89□□□□□ -2.11
SIR4YDR227W RRN10P38204 145 aa1.89□□□□□ -2.11
SIR4YDR227W YJR154WP47181 346 aa1.89□□□□□ -2.11
SIR4YDR227W GCV1P48015 400 aa1.89□□□□□ -2.11
SIR4YDR227W MSC1Q03104 513 aa1.89□□□□□ -2.11
SIR4YDR227W CDC123Q05791 360 aa1.89□□□□□ -2.11
SIR4YDR227W THP1Q08231 455 aa1.89□□□□□ -2.11
SIR4YDR227W RUP1Q12242 671 aa1.89□□□□□ -2.11
SIR4YDR227W JLP1Q12358 412 aa1.89□□□□□ -2.11
SIR4YDR227W SPS4P09937 338 aa1.89□□□□□ -2.11
SIR4YDR227W MEI5P32489 222 aa1.89□□□□□ -2.11
SIR4YDR227W QDR3P38227 689 aa1.89□□□□□ -2.11
SIR4YDR227W YHR177WP38867 453 aa1.89□□□□□ -2.11
SIR4YDR227W SNG1P46950 547 aa1.89□□□□□ -2.11
SIR4YDR227W PRY1P47032 299 aa1.89□□□□□ -2.11
SIR4YDR227W NBP35P52920 328 aa1.89□□□□□ -2.11
SIR4YDR227W OKP1P53298 406 aa1.89□□□□□ -2.11
SIR4YDR227W YNL234WP53857 426 aa1.89□□□□□ -2.11
SIR4YDR227W INN1P53901 409 aa1.89□□□□□ -2.11
SIR4YDR227W YNL095CP53932 642 aa1.89□□□□□ -2.11
SIR4YDR227W HER2Q03557 464 aa1.89□□□□□ -2.11
SIR4YDR227W YDR387CQ04162 555 aa1.89□□□□□ -2.11
SIR4YDR227W DLT1Q04216 342 aa1.89□□□□□ -2.11
SIR4YDR227W YCR061WP25639 631 aa1.88□□□□□ -2.11
SIR4YDR227W NAM9P27929 486 aa1.88□□□□□ -2.11
SIR4YDR227W TRS65P32893 560 aa1.88□□□□□ -2.11
SIR4YDR227W SSN3P39073 555 aa1.88□□□□□ -2.11
SIR4YDR227W VHS2P40463 436 aa1.88□□□□□ -2.11
SIR4YDR227W PSA1P41940 361 aaKnown RBP1.88□□□□□ -2.11
SIR4YDR227W CIN2P46670 268 aa1.88□□□□□ -2.11
SIR4YDR227W PEX31P53203 462 aa1.88□□□□□ -2.11
SIR4YDR227W SPR6Q01684 191 aa1.88□□□□□ -2.11
SIR4YDR227W NOG1Q02892 647 aaKnown RBP1.88□□□□□ -2.11
SIR4YDR227W USA1Q03714 838 aa1.88□□□□□ -2.11
SIR4YDR227W COQ9Q05779 260 aa1.88□□□□□ -2.11
SIR4YDR227W RIF2Q06208 395 aa1.88□□□□□ -2.11
SIR4YDR227W GTT2Q12390 233 aa1.88□□□□□ -2.11
SIR4YDR227W YDL199CQ12407 687 aa1.88□□□□□ -2.11
SIR4YDR227W MDN1Q12019 4910 aaKnown RBP1.88□□□□□ -2.11
SIR4YDR227W SAL1D6W196 494 aa1.88□□□□□ -2.11
SIR4YDR227W ADE5,7P07244 802 aaKnown RBP1.88□□□□□ -2.11
SIR4YDR227W HEM15P16622 393 aa1.88□□□□□ -2.11
SIR4YDR227W PBN1P25580 416 aa1.88□□□□□ -2.11
SIR4YDR227W PRS4P38063 326 aaPredicted RBP1.88□□□□□ -2.11
SIR4YDR227W DER1P38307 211 aa1.88□□□□□ -2.11
SIR4YDR227W LAS21P40367 830 aa1.88□□□□□ -2.11
SIR4YDR227W COA1P40452 197 aa1.88□□□□□ -2.11
SIR4YDR227W UFE1P41834 346 aa1.88□□□□□ -2.11
SIR4YDR227W SWP82P43554 623 aa1.88□□□□□ -2.11
SIR4YDR227W TAD2P47058 250 aa1.88□□□□□ -2.11
SIR4YDR227W GET1P53192 235 aa1.88□□□□□ -2.11
SIR4YDR227W KTR5P53966 522 aaPredicted RBP1.88□□□□□ -2.11
SIR4YDR227W SLG1P54867 378 aa1.88□□□□□ -2.11
SIR4YDR227W HMO1Q03973 246 aaKnown RBP1.88□□□□□ -2.11
SIR4YDR227W YDR415CQ04033 374 aaPredicted RBP1.88□□□□□ -2.11
SIR4YDR227W PUS7Q08647 676 aaKnown RBP1.88□□□□□ -2.11
SIR4YDR227W CDC10P25342 322 aaKnown RBP1.88□□□□□ -2.11
SIR4YDR227W FMP46P36141 133 aaKnown RBP1.88□□□□□ -2.11
SIR4YDR227W TCM62P38228 572 aaKnown RBP1.88□□□□□ -2.11
SIR4YDR227W TAE1P38340 232 aa1.88□□□□□ -2.11
SIR4YDR227W NDT80P38830 627 aa1.88□□□□□ -2.11
SIR4YDR227W ERG28P40030 148 aa1.88□□□□□ -2.11
SIR4YDR227W MNN5P46982 586 aa1.88□□□□□ -2.11
SIR4YDR227W YJR149WP47177 404 aa1.88□□□□□ -2.11
SIR4YDR227W PMT5P52867 743 aa1.88□□□□□ -2.11
SIR4YDR227W CWC23P52868 283 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms