RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	HIS7	P33734	552 aa	Known RBP	4.06	□□□□□ -1.76
SSB1	YDL229W	APT2	P36973	181 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	EHT1	P38295	451 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	MBA1	P38300	278 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	BAT1	P38891	393 aa	Known RBP	4.06	□□□□□ -1.76
SSB1	YDL229W	CRG1	P38892	291 aa	RIP-Chip data	4.06	□□□□□ -1.76	not detected
SSB1	YDL229W	YAL037W	P39728	267 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	VPS52	P39904	641 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	FMP52	P40008	231 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	COX15	P40086	486 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	KTR7	P40504	517 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	YIL060W	P40519	144 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	YJL107C	P42947	387 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	HIT1	P46973	164 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	CSN12	P47130	423 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	VPS73	P53142	486 aa	Known RBP	4.06	□□□□□ -1.76
SSB1	YDL229W	YDR366C	P87287	132 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	DIG1	Q03063	452 aa	Known RBP	4.06	□□□□□ -1.76
SSB1	YDL229W	CGI121	Q03705	181 aa	Known RBP	4.06	□□□□□ -1.76
SSB1	YDL229W	ECI1	Q05871	280 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	GAS2	Q06135	555 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	TDA5	Q06417	326 aa	Known RBP	4.06	□□□□□ -1.76
SSB1	YDL229W	XYL2	Q07993	356 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	UBX3	Q12229	455 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	SLO1	Q3E784	85 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	UBR1	P19812	1950 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	COX2	P00410	251 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	BI2	P03873	423 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	AAC1	P04710	309 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	NAM2	P11325	894 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	NHP6B	P11633	99 aa	Known RBP	4.05	□□□□□ -1.76
SSB1	YDL229W	CAP2	P13517	287 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	SGF29	P25554	259 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	YCL049C	P25577	312 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	BUB3	P26449	341 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	RAD14	P28519	371 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	SRY1	P36007	326 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	NSG1	P38837	291 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	PTI1	P39927	425 aa	Predicted RBP	4.05	□□□□□ -1.76
SSB1	YDL229W	JHD1	P40034	492 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	YER188W	P40103	239 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	QDR1	P40475	563 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	BST1	P43571	1029 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	SFH5	P47008	294 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	NIT2	P47016	307 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	YJR012C	P47087	207 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	ECM27	P47144	725 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	ASN1	P49089	572 aa	Known RBP	4.05	□□□□□ -1.76
SSB1	YDL229W	ASN2	P49090	572 aa	Known RBP	4.05	□□□□□ -1.76
SSB1	YDL229W	TRM9	P49957	279 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	COS10	P52924	374 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	NMA2	P53204	395 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	POP6	P53218	158 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	RTT102	P53330	157 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	YNL260C	P53846	198 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	MOT3	P54785	490 aa	Known RBP	4.05	□□□□□ -1.76
SSB1	YDL229W	ARG5,6	Q01217	863 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	ATG33	Q06485	197 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	THI72	Q08579	599 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	FDH1	Q08911	376 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	LEA1	Q08963	238 aa	Predicted RBP	4.05	□□□□□ -1.76
SSB1	YDL229W	FCF2	Q12035	217 aa	Predicted RBP	4.05	□□□□□ -1.76
SSB1	YDL229W	SWT1	Q12104	458 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	USB1	Q12208	290 aa	Known RBP	4.05	□□□□□ -1.76
SSB1	YDL229W	RGT2	Q12300	763 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	YIR021W-A	Q3E739	70 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	YKL033W-A	Q86ZR7	236 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	SPE1	P08432	466 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	GUK1	P15454	187 aa	Known RBP	4.05	□□□□□ -1.76
SSB1	YDL229W	SAT4	P25333	603 aa	Known RBP	4.05	□□□□□ -1.76
SSB1	YDL229W	ADH7	P25377	361 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	TUL1	P36096	758 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	MMS21	P38632	267 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	MIP6	P38760	659 aa	Known RBP	4.05	□□□□□ -1.76
SSB1	YDL229W	ALP1	P38971	573 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	SRP14	P38985	146 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	PAC2	P39937	518 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	GAT2	P40209	560 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	GLR1	P41921	483 aa	Known RBP	4.05	□□□□□ -1.76
SSB1	YDL229W	SPG5	P42933	373 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	YFL052W	P43551	465 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	NUP57	P48837	541 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	PHO23	P50947	330 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	AIF1	P52923	378 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	RTA1	P53047	317 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	MKC7	P53379	596 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	TIM8	P57744	87 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	RNH202	Q05635	350 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	YLR224W	Q05947	369 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	ACK1	Q07622	623 aa	Predicted RBP	4.05	□□□□□ -1.76
SSB1	YDL229W	TPO1	Q07824	586 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	THI20	Q08224	551 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	RAD28	Q12021	506 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	TFC7	Q12415	435 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	KCS1	Q12494	1050 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	YCR075W-A	Q3E830	75 aa		4.05	□□□□□ -1.76
SSB1	YDL229W	AI1	P03875	834 aa		4.04	□□□□□ -1.76
SSB1	YDL229W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
SSB1	YDL229W	CWP1	P28319	239 aa		4.04	□□□□□ -1.76
SSB1	YDL229W	PRP18	P33411	251 aa	Predicted RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms