RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W PRO2P54885 456 aaKnown RBP2.71□□□□□ -1.98
SHR3YDL212W DAL5P15365 543 aa2.7□□□□□ -1.98
SHR3YDL212W MRPL20P22354 195 aaPredicted RBP2.7□□□□□ -1.98
SHR3YDL212W YKL187CP34231 750 aa2.7□□□□□ -1.98
SHR3YDL212W ASG7P46993 209 aa2.7□□□□□ -1.98
SHR3YDL212W CAX4P53223 239 aa2.7□□□□□ -1.98
SHR3YDL212W PXR1P53335 271 aaPredicted RBP2.7□□□□□ -1.98
SHR3YDL212W HCH1P53834 153 aa2.7□□□□□ -1.98
SHR3YDL212W STE23Q06010 1027 aa2.7□□□□□ -1.98
SHR3YDL212W RDL2Q08742 149 aaKnown RBP2.7□□□□□ -1.98
SHR3YDL212W RGS2Q99188 309 aa2.7□□□□□ -1.98
SHR3YDL212W DAL81P21657 970 aa2.69□□□□□ -1.98
SHR3YDL212W KTI12P34253 313 aaKnown RBP2.69□□□□□ -1.98
SHR3YDL212W PET8P38921 284 aa2.69□□□□□ -1.98
SHR3YDL212W POP2P39008 433 aa2.69□□□□□ -1.98
SHR3YDL212W MIC19P43594 170 aa2.69□□□□□ -1.98
SHR3YDL212W YNL146WP53906 100 aa2.69□□□□□ -1.98
SHR3YDL212W MRX9Q07349 420 aaKnown RBP2.69□□□□□ -1.98
SHR3YDL212W YPL264CQ08980 353 aa2.69□□□□□ -1.98
SHR3YDL212W REX3Q12090 404 aa2.69□□□□□ -1.98
SHR3YDL212W RNR2P09938 399 aaKnown RBP2.68□□□□□ -1.98
SHR3YDL212W BUD2P33314 1104 aa2.68□□□□□ -1.98
SHR3YDL212W ECM14P38836 430 aa2.68□□□□□ -1.98
SHR3YDL212W SLM1P40485 686 aa2.68□□□□□ -1.98
SHR3YDL212W YGL118CP53132 145 aa2.68□□□□□ -1.98
SHR3YDL212W ACT1P60010 375 aaKnown RBP2.68□□□□□ -1.98
SHR3YDL212W YDR262WQ12331 272 aa2.68□□□□□ -1.98
SHR3YDL212W TRM10Q12400 293 aa2.68□□□□□ -1.98
SHR3YDL212W GAL3P13045 520 aa2.67□□□□□ -1.98
SHR3YDL212W INO2P26798 304 aa2.67□□□□□ -1.98
SHR3YDL212W SUR1P33300 382 aa2.67□□□□□ -1.98
SHR3YDL212W YIL054WP40524 105 aa2.67□□□□□ -1.98
SHR3YDL212W TAF6P53040 516 aa2.67□□□□□ -1.98
SHR3YDL212W MGR3Q04472 501 aa2.67□□□□□ -1.98
SHR3YDL212W PRM4Q12498 284 aa2.67□□□□□ -1.98
SHR3YDL212W SMC2P38989 1170 aaKnown RBP2.66□□□□□ -1.98
SHR3YDL212W YFL040WP43562 540 aa2.66□□□□□ -1.98
SHR3YDL212W ABZ2Q03266 374 aa2.66□□□□□ -1.98
SHR3YDL212W VPS20Q04272 221 aa2.66□□□□□ -1.98
SHR3YDL212W SGT2Q12118 346 aaKnown RBP2.66□□□□□ -1.98
SHR3YDL212W TFC7Q12415 435 aa2.66□□□□□ -1.98
SHR3YDL212W YPR096CO13587 100 aa2.65□□□□□ -1.99
SHR3YDL212W HPR1P17629 752 aaKnown RBP2.65□□□□□ -1.99
SHR3YDL212W CDC42P19073 191 aa2.65□□□□□ -1.99
SHR3YDL212W ARO4P32449 370 aaKnown RBP2.65□□□□□ -1.99
SHR3YDL212W ALK2P32789 676 aaPredicted RBP2.65□□□□□ -1.99
SHR3YDL212W TKL2P33315 681 aa2.65□□□□□ -1.99
SHR3YDL212W CTM1P38818 585 aa2.65□□□□□ -1.99
SHR3YDL212W AIM20P40451 204 aa2.65□□□□□ -1.99
SHR3YDL212W DXO1Q06349 442 aa2.65□□□□□ -1.99
SHR3YDL212W YLR012CQ07927 99 aa2.65□□□□□ -1.99
SHR3YDL212W STF1P01098 86 aa2.64□□□□□ -1.99
SHR3YDL212W CDC37P06101 506 aaKnown RBP2.64□□□□□ -1.99
SHR3YDL212W RBK1P25332 333 aa2.64□□□□□ -1.99
SHR3YDL212W ITR2P30606 609 aa2.64□□□□□ -1.99
SHR3YDL212W MEI5P32489 222 aa2.64□□□□□ -1.99
SHR3YDL212W ASP1P38986 381 aaPredicted RBP2.64□□□□□ -1.99
SHR3YDL212W OSW5P40219 148 aa2.64□□□□□ -1.99
SHR3YDL212W YNR066CP53752 436 aa2.64□□□□□ -1.99
SHR3YDL212W BUR2Q05949 395 aa2.64□□□□□ -1.99
SHR3YDL212W RTC5Q12108 567 aaKnown RBP2.64□□□□□ -1.99
SHR3YDL212W RPL18AP0CX49 186 aaKnown RBP2.63□□□□□ -1.99
SHR3YDL212W RPL18BP0CX50 186 aaKnown RBP2.63□□□□□ -1.99
SHR3YDL212W YPS1P32329 569 aa2.63□□□□□ -1.99
SHR3YDL212W PPQ1P32945 549 aa2.63□□□□□ -1.99
SHR3YDL212W YDR089WP38966 869 aa2.63□□□□□ -1.99
SHR3YDL212W SSO2P39926 295 aa2.63□□□□□ -1.99
SHR3YDL212W YFR045WP43617 309 aa2.63□□□□□ -1.99
SHR3YDL212W CBP2P03874 630 aaPredicted RBP2.62□□□□□ -1.99
SHR3YDL212W PET18P25362 215 aa2.62□□□□□ -1.99
SHR3YDL212W MIG1P27705 504 aa2.62□□□□□ -1.99
SHR3YDL212W PES4P39684 611 aa2.62□□□□□ -1.99
SHR3YDL212W YGR168CP53293 376 aa2.62□□□□□ -1.99
SHR3YDL212W YPL113CQ02961 396 aa2.62□□□□□ -1.99
SHR3YDL212W RVB1Q03940 463 aaKnown RBP2.62□□□□□ -1.99
SHR3YDL212W CAB5Q03941 241 aa2.62□□□□□ -1.99
SHR3YDL212W DTD1Q07648 150 aaKnown RBP2.62□□□□□ -1.99
SHR3YDL212W YPR063CQ12160 140 aa2.62□□□□□ -1.99
SHR3YDL212W TDH2P00358 332 aaKnown RBP2.61□□□□□ -1.99
SHR3YDL212W TDH3P00359 332 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
SHR3YDL212W VMA5P31412 392 aaKnown RBP2.61□□□□□ -1.99
SHR3YDL212W YKL162CP36052 402 aa2.61□□□□□ -1.99
SHR3YDL212W MED8P38304 223 aa2.61□□□□□ -1.99
SHR3YDL212W SWC5P38326 303 aa2.61□□□□□ -1.99
SHR3YDL212W INA22P40576 216 aa2.61□□□□□ -1.99
SHR3YDL212W YNL040WP53960 456 aaPredicted RBP2.61□□□□□ -1.99
SHR3YDL212W UBX2Q04228 584 aa2.61□□□□□ -1.99
SHR3YDL212W YLR297WQ05899 129 aa2.61□□□□□ -1.99
SHR3YDL212W YPL245WQ12179 454 aaKnown RBP2.61□□□□□ -1.99
SHR3YDL212W ERP3Q12403 225 aa2.61□□□□□ -1.99
SHR3YDL212W MSS116P15424 664 aaKnown RBP2.6□□□□□ -1.99
SHR3YDL212W PRE7P23724 241 aaKnown RBP2.6□□□□□ -1.99
SHR3YDL212W GPX1P36014 167 aa2.6□□□□□ -1.99
SHR3YDL212W YBR062CP38239 180 aa2.6□□□□□ -1.99
SHR3YDL212W END3P39013 349 aa2.6□□□□□ -1.99
SHR3YDL212W YER084WP40057 128 aa2.6□□□□□ -1.99
SHR3YDL212W HSH155P49955 971 aaKnown RBP2.6□□□□□ -1.99
SHR3YDL212W RIB4P50861 169 aaPredicted RBP2.6□□□□□ -1.99
SHR3YDL212W YGL088WP53151 121 aa2.6□□□□□ -1.99
SHR3YDL212W DBP6P53734 629 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms