RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W YTH1Q06102 208 aaPredicted RBP1.93□□□□□ -2.1
USO1YDL058W YLR446WQ06204 433 aa1.93□□□□□ -2.1
USO1YDL058W MLH3Q12083 715 aa1.93□□□□□ -2.1
USO1YDL058W JID1Q12350 301 aa1.93□□□□□ -2.1
USO1YDL058W YDL206WQ12424 762 aa1.93□□□□□ -2.1
USO1YDL058W YKL183C-AQ3E765 70 aa1.93□□□□□ -2.1
USO1YDL058W DED1P06634 604 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W ADK1P07170 222 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W HEM1P09950 548 aaPredicted RBP1.93□□□□□ -2.1
USO1YDL058W YML003WP0CF16 290 aa1.93□□□□□ -2.1
USO1YDL058W PRE1P22141 198 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W MGR1P25573 417 aa1.93□□□□□ -2.1
USO1YDL058W CNE1P27825 502 aa1.93□□□□□ -2.1
USO1YDL058W DPH2P32461 534 aa1.93□□□□□ -2.1
USO1YDL058W CAT2P32796 670 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W PPQ1P32945 549 aa1.93□□□□□ -2.1
USO1YDL058W TRM2P33753 639 aa1.93□□□□□ -2.1
USO1YDL058W TCM62P38228 572 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W YHR033WP38690 423 aa1.93□□□□□ -2.1
USO1YDL058W PRP39P39682 629 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W YER184CP39961 794 aa1.93□□□□□ -2.1
USO1YDL058W SER33P40510 469 aa1.93□□□□□ -2.1
USO1YDL058W MNN5P46982 586 aa1.93□□□□□ -2.1
USO1YDL058W MDE1P47095 244 aa1.93□□□□□ -2.1
USO1YDL058W AVT4P50944 713 aa1.93□□□□□ -2.1
USO1YDL058W MDM34P53083 459 aa1.93□□□□□ -2.1
USO1YDL058W CDH1P53197 566 aa1.93□□□□□ -2.1
USO1YDL058W IMO32P53219 342 aa1.93□□□□□ -2.1
USO1YDL058W YNR071CP53757 342 aa1.93□□□□□ -2.1
USO1YDL058W YVH1Q02256 364 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W INP1Q03694 420 aa1.93□□□□□ -2.1
USO1YDL058W YDR239CQ03780 787 aa1.93□□□□□ -2.1
USO1YDL058W HNT1Q04344 158 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W YDR286CQ05530 114 aa1.93□□□□□ -2.1
USO1YDL058W DUS4Q06063 367 aa1.93□□□□□ -2.1
USO1YDL058W PLB3Q08108 686 aa1.93□□□□□ -2.1
USO1YDL058W GIS3Q12418 502 aa1.93□□□□□ -2.1
USO1YDL058W MSW1P04803 379 aa1.93□□□□□ -2.1
USO1YDL058W PHR1P05066 565 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
USO1YDL058W SPO11P23179 398 aa1.93□□□□□ -2.1
USO1YDL058W RAD57P25301 460 aa1.93□□□□□ -2.1
USO1YDL058W UTR4P32626 227 aa1.93□□□□□ -2.1
USO1YDL058W UGP1P32861 499 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W ADH5P38113 351 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W YKE4P40544 346 aa1.93□□□□□ -2.1
USO1YDL058W ERG10P41338 398 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W UBC13P52490 153 aa1.93□□□□□ -2.1
USO1YDL058W YGL204CP53089 101 aa1.93□□□□□ -2.1
USO1YDL058W PIB2P53191 635 aa1.93□□□□□ -2.1
USO1YDL058W YGR117CP53270 476 aa1.93□□□□□ -2.1
USO1YDL058W RSM27P53305 110 aa1.93□□□□□ -2.1
USO1YDL058W BUD17P53727 317 aa1.93□□□□□ -2.1
USO1YDL058W NRK1P53915 240 aa1.93□□□□□ -2.1
USO1YDL058W RHO4Q00246 291 aa1.93□□□□□ -2.1
USO1YDL058W ECM23Q02710 187 aa1.93□□□□□ -2.1
USO1YDL058W YMR099CQ03161 297 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W YMR295CQ03559 197 aa1.93□□□□□ -2.1
USO1YDL058W YPR196WQ06595 470 aa1.93□□□□□ -2.1
USO1YDL058W YOL024WQ08172 172 aa1.93□□□□□ -2.1
USO1YDL058W YOL073CQ08232 322 aa1.93□□□□□ -2.1
USO1YDL058W KTI11Q3E840 82 aa1.93□□□□□ -2.1
USO1YDL058W BUD3P25558 1636 aa1.93□□□□□ -2.1
USO1YDL058W YEL076C-AP0CX16 216 aa1.93□□□□□ -2.1
USO1YDL058W YLR464WP0CX17 216 aa1.93□□□□□ -2.1
USO1YDL058W GAL3P13045 520 aa1.93□□□□□ -2.1
USO1YDL058W SNA3P14359 133 aa1.93□□□□□ -2.1
USO1YDL058W AAC3P18238 307 aa1.93□□□□□ -2.1
USO1YDL058W MCK1P21965 375 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W CLB6P32943 380 aa1.93□□□□□ -2.1
USO1YDL058W PTC1P35182 281 aa1.93□□□□□ -2.1
USO1YDL058W ATX1P38636 73 aa1.93□□□□□ -2.1
USO1YDL058W SPL2P38839 148 aa1.93□□□□□ -2.1
USO1YDL058W SEO1P39709 593 aa1.93□□□□□ -2.1
USO1YDL058W YEL076CP39971 216 aa1.93□□□□□ -2.1
USO1YDL058W OST1P41543 476 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W OYE3P41816 400 aaPredicted RBP1.93□□□□□ -2.1
USO1YDL058W GCD14P46959 383 aaPredicted RBP1.93□□□□□ -2.1
USO1YDL058W IMD3P50095 523 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W GOR1P53839 350 aa1.93□□□□□ -2.1
USO1YDL058W OCA2P53949 197 aa1.93□□□□□ -2.1
USO1YDL058W CTK1Q03957 528 aaKnown RBP1.93□□□□□ -2.1
USO1YDL058W YML083CQ04526 418 aa1.93□□□□□ -2.1
USO1YDL058W CTR3Q06686 241 aa1.93□□□□□ -2.1
USO1YDL058W MCH1Q07376 486 aa1.93□□□□□ -2.1
USO1YDL058W THI72Q08579 599 aa1.93□□□□□ -2.1
USO1YDL058W TOP3P13099 656 aa1.92□□□□□ -2.1
USO1YDL058W HYM1P32464 399 aa1.92□□□□□ -2.1
USO1YDL058W SFC1P33303 322 aa1.92□□□□□ -2.1
USO1YDL058W ELF1P36053 145 aa1.92□□□□□ -2.1
USO1YDL058W MRPL28P36527 147 aa1.92□□□□□ -2.1
USO1YDL058W MRPL17P36528 281 aa1.92□□□□□ -2.1
USO1YDL058W CTP1P38152 299 aa1.92□□□□□ -2.1
USO1YDL058W LSM2P38203 95 aaKnown RBP1.92□□□□□ -2.1
USO1YDL058W YHL026CP38740 315 aa1.92□□□□□ -2.1
USO1YDL058W PTI1P39927 425 aaPredicted RBP1.92□□□□□ -2.1
USO1YDL058W YND1P40009 630 aa1.92□□□□□ -2.1
USO1YDL058W DIM1P41819 318 aaKnown RBP1.92□□□□□ -2.1
USO1YDL058W TTI2P47168 421 aa1.92□□□□□ -2.1
USO1YDL058W YGR012WP53206 393 aa1.92□□□□□ -2.1
USO1YDL058W RCF2P53721 224 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 120.8 ms