RNA–Protein interactions for RNA: YBL089W

AVT5, Transcript of Putative transporter, yeast

Gene AVT5, Length 1,380 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT5	YBL089W	SHY1	P53266	389 aa		2.62	□□□□□ -1.99
AVT5	YBL089W	SUR7	P54003	302 aa		2.62	□□□□□ -1.99
AVT5	YBL089W	HRI1	Q05905	244 aa	Known RBP	2.62	□□□□□ -1.99
AVT5	YBL089W	TAF10	Q12030	206 aa		2.62	□□□□□ -1.99
AVT5	YBL089W	POM33	Q12164	279 aa		2.62	□□□□□ -1.99
AVT5	YBL089W	MCT1	Q12283	360 aa		2.62	□□□□□ -1.99
AVT5	YBL089W	ATG31	Q12421	196 aa		2.62	□□□□□ -1.99
AVT5	YBL089W	IZH4	Q99393	312 aa		2.62	□□□□□ -1.99
AVT5	YBL089W	HHF1	P02309	103 aa	Known RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	MET16	P18408	261 aa	Predicted RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	MIR1	P23641	311 aa	Known RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	RRT12	P25381	491 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
AVT5	YBL089W	MCH2	P36032	473 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	ANR2	P36090	516 aa	Predicted RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	RPC37	P36121	282 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	YPC1	P38298	316 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	PTI1	P39927	425 aa	Predicted RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	RTR1	P40084	226 aa	Predicted RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	REE1	P40893	198 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	GDS1	P41913	522 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	TIS11	P47977	285 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	UTP23	Q12339	254 aa	Known RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	IZH2	Q12442	317 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	YBL111C	Q3E7Y5	667 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	SPT15	P13393	240 aa	Known RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	CTA1	P15202	515 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	RPB4	P20433	221 aa	Predicted RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	RPB5	P20434	215 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	VPS1	P21576	704 aa	Known RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	DAL82	P21705	255 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	YCR016W	P25617	290 aa	Known RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	RPL16B	P26785	198 aa	Known RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	PRR1	P28708	518 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	PRS4	P38063	326 aa	Predicted RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	SWD3	P38123	315 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	TCD1	P38756	429 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	PEX22	P39718	180 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	YNL208W	P40159	199 aa	Known RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	YFR057W	P43625	151 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	AIM23	P47015	356 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	UBC13	P52490	153 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	CLD1	P53264	445 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	CRH1	P53301	507 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	CPD1	P53314	239 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	ALG11	P53954	548 aa	Known RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	CDC14	Q00684	551 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	INP2	Q03824	705 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	VBA1	Q04301	562 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	GAS2	Q06135	555 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	SDO1	Q07953	250 aa	Known RBP	2.61	□□□□□ -1.99
AVT5	YBL089W	ATP16	Q12165	160 aa		2.61	□□□□□ -1.99
AVT5	YBL089W	ILV1	P00927	576 aa	Known RBP	2.6	□□□□□ -1.99
AVT5	YBL089W	ERD1	P16151	362 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	NUP2	P32499	720 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	PDC2	P32896	925 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	MRPL6	P32904	214 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	KTI12	P34253	313 aa	Known RBP	2.6	□□□□□ -1.99
AVT5	YBL089W	BMH2	P34730	273 aa	Known RBP	2.6	□□□□□ -1.99
AVT5	YBL089W	YKL071W	P36086	256 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	SOP4	P39543	234 aa	Predicted RBP	2.6	□□□□□ -1.99
AVT5	YBL089W	MSS2	P40990	351 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	MOB2	P43563	287 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	ATG18	P43601	500 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	BIR1	P47134	954 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	SWC4	P53201	476 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	OST6	Q03723	332 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	MYO5	Q04439	1219 aa	Known RBP	2.6	□□□□□ -1.99
AVT5	YBL089W	ADH6	Q04894	360 aa	Known RBP	2.6	□□□□□ -1.99
AVT5	YBL089W	FSH2	Q05015	223 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	TAZ1	Q06510	381 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	MRX9	Q07349	420 aa	Known RBP	2.6	□□□□□ -1.99
AVT5	YBL089W	PAM18	Q07914	168 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	FDH1	Q08911	376 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	HMS1	Q12398	434 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	GIS3	Q12418	502 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	PRM4	Q12498	284 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	ADF1	Q2V2Q1	113 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	NAG1	Q8TGN9	163 aa		2.6	□□□□□ -1.99
AVT5	YBL089W	TDH2	P00358	332 aa	Known RBP	2.59	□□□□□ -2
AVT5	YBL089W	HIS1	P00498	297 aa	Known RBP	2.59	□□□□□ -2
AVT5	YBL089W	MRP1	P10662	321 aa	Known RBP	2.59	□□□□□ -2
AVT5	YBL089W	KRE6	P32486	720 aa		2.59	□□□□□ -2
AVT5	YBL089W	MRPL10	P36520	322 aa		2.59	□□□□□ -2
AVT5	YBL089W	LSM12	P38828	187 aa	Known RBP	2.59	□□□□□ -2
AVT5	YBL089W	BAT1	P38891	393 aa	Known RBP	2.59	□□□□□ -2
AVT5	YBL089W	PET8	P38921	284 aa		2.59	□□□□□ -2
AVT5	YBL089W	VHT1	P53241	593 aa		2.59	□□□□□ -2
AVT5	YBL089W	TPC1	P53257	314 aa		2.59	□□□□□ -2
AVT5	YBL089W	VAC7	P53950	1165 aa		2.59	□□□□□ -2
AVT5	YBL089W	KTR6	P54070	446 aa		2.59	□□□□□ -2
AVT5	YBL089W	SCS7	Q03529	384 aa		2.59	□□□□□ -2
AVT5	YBL089W	MSH5	Q12175	901 aa		2.59	□□□□□ -2
AVT5	YBL089W	SFM1	Q12314	213 aa		2.59	□□□□□ -2
AVT5	YBL089W	JID1	Q12350	301 aa		2.59	□□□□□ -2
AVT5	YBL089W	CHD1	P32657	1468 aa		2.58	□□□□□ -2
AVT5	YBL089W	MATALPHA1	P0CY06	175 aa		2.58	□□□□□ -2
AVT5	YBL089W	HMLALPHA1	P0CY07	175 aa		2.58	□□□□□ -2
AVT5	YBL089W	TFS1	P14306	219 aa		2.58	□□□□□ -2
AVT5	YBL089W	GIT1	P25346	518 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms