RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W SUI3P09064 285 aaKnown RBP4.5□□□□□ -1.69
PRE7YBL041W RNA1P11745 407 aaKnown RBP4.5□□□□□ -1.69
PRE7YBL041W CTA1P15202 515 aa4.5□□□□□ -1.69
PRE7YBL041W UTR1P21373 530 aa4.5□□□□□ -1.69
PRE7YBL041W SCO1P23833 295 aa4.5□□□□□ -1.69
PRE7YBL041W SSE1P32589 693 aaKnown RBP4.5□□□□□ -1.69
PRE7YBL041W MTC4P38335 694 aaKnown RBP4.5□□□□□ -1.69
PRE7YBL041W PTH1P38876 190 aaKnown RBP4.5□□□□□ -1.69
PRE7YBL041W YHR218WP38899 603 aa4.5□□□□□ -1.69
PRE7YBL041W SHO1P40073 367 aa4.5□□□□□ -1.69
PRE7YBL041W YNL208WP40159 199 aaKnown RBP4.5□□□□□ -1.69
PRE7YBL041W MET28P40573 187 aa4.5□□□□□ -1.69
PRE7YBL041W HXT9P40885 567 aa4.5□□□□□ -1.69
PRE7YBL041W ARF3P40994 183 aaRIP-Chip data4.5□□□□□ -1.69not detected
PRE7YBL041W MKC7P53379 596 aa4.5□□□□□ -1.69
PRE7YBL041W HXT11P54862 567 aa4.5□□□□□ -1.69
PRE7YBL041W SNX41Q04053 625 aa4.5□□□□□ -1.69
PRE7YBL041W GTB1Q04924 702 aa4.5□□□□□ -1.69
PRE7YBL041W HER1Q12276 1246 aa4.5□□□□□ -1.69
PRE7YBL041W YDL199CQ12407 687 aa4.5□□□□□ -1.69
PRE7YBL041W ATP2P00830 511 aaKnown RBP4.49□□□□□ -1.69
PRE7YBL041W MSS18P08593 268 aa4.49□□□□□ -1.69
PRE7YBL041W MDH2P22133 377 aa4.49□□□□□ -1.69
PRE7YBL041W RPI1P23250 407 aaKnown RBP4.49□□□□□ -1.69
PRE7YBL041W YCK1P23291 538 aa4.49□□□□□ -1.69
PRE7YBL041W RIB1P38066 345 aa4.49□□□□□ -1.69
PRE7YBL041W RRP4P38792 359 aaKnown RBP4.49□□□□□ -1.69
PRE7YBL041W YHR097CP38809 366 aaKnown RBP4.49□□□□□ -1.69
PRE7YBL041W YHR180WP38868 163 aa4.49□□□□□ -1.69
PRE7YBL041W SEN34P39707 275 aa4.49□□□□□ -1.69
PRE7YBL041W TMA22P47089 198 aaPredicted RBP4.49□□□□□ -1.69
PRE7YBL041W NUP57P48837 541 aa4.49□□□□□ -1.69
PRE7YBL041W MPC1P53157 130 aaKnown RBP4.49□□□□□ -1.69
PRE7YBL041W YNR068CP53754 272 aa4.49□□□□□ -1.69
PRE7YBL041W YNL181WP53878 407 aa4.49□□□□□ -1.69
PRE7YBL041W COX20Q04935 205 aa4.49□□□□□ -1.69
PRE7YBL041W BCP1Q06338 283 aa4.49□□□□□ -1.69
PRE7YBL041W RDL2Q08742 149 aaKnown RBP4.49□□□□□ -1.69
PRE7YBL041W WTM1Q12363 437 aaKnown RBP4.49□□□□□ -1.69
PRE7YBL041W HEM4P06174 275 aa4.48□□□□□ -1.69
PRE7YBL041W RAD7P06779 565 aa4.48□□□□□ -1.69
PRE7YBL041W MET2P08465 486 aa4.48□□□□□ -1.69
PRE7YBL041W ERD2P18414 219 aa4.48□□□□□ -1.69
PRE7YBL041W PEX3P28795 441 aa4.48□□□□□ -1.69
PRE7YBL041W MRPL39P36533 70 aa4.48□□□□□ -1.69
PRE7YBL041W YGP1P38616 354 aaKnown RBP4.48□□□□□ -1.69
PRE7YBL041W RCY1P39531 840 aa4.48□□□□□ -1.69
PRE7YBL041W COG3P40094 801 aa4.48□□□□□ -1.69
PRE7YBL041W MPM1P40364 252 aa4.48□□□□□ -1.69
PRE7YBL041W MSY1P48527 492 aa4.48□□□□□ -1.69
PRE7YBL041W GET1P53192 235 aa4.48□□□□□ -1.69
PRE7YBL041W COX18P53239 316 aa4.48□□□□□ -1.69
PRE7YBL041W YGR151CP53287 111 aa4.48□□□□□ -1.69
PRE7YBL041W UTP21Q06078 939 aaPredicted RBP4.48□□□□□ -1.69
PRE7YBL041W ATG26Q06321 1198 aa4.48□□□□□ -1.69
PRE7YBL041W YDL109CQ12103 647 aa4.48□□□□□ -1.69
PRE7YBL041W MRX4Q12467 430 aa4.48□□□□□ -1.69
PRE7YBL041W MHF2Q3E829 80 aa4.48□□□□□ -1.69
PRE7YBL041W DET1Q99288 334 aaKnown RBP4.48□□□□□ -1.69
PRE7YBL041W YOL163WP0CF20 169 aa4.47□□□□□ -1.69
PRE7YBL041W CMK2P22517 447 aa4.47□□□□□ -1.69
PRE7YBL041W PUP2P32379 260 aa4.47□□□□□ -1.69
PRE7YBL041W HIR2P32480 875 aa4.47□□□□□ -1.69
PRE7YBL041W PEX6P33760 1030 aa4.47□□□□□ -1.69
PRE7YBL041W NUF2P33895 451 aa4.47□□□□□ -1.69
PRE7YBL041W MTR2P34232 184 aaKnown RBP4.47□□□□□ -1.69
PRE7YBL041W YEL068CP39977 110 aa4.47□□□□□ -1.69
PRE7YBL041W YMR144WP40214 342 aaKnown RBP4.47□□□□□ -1.69
PRE7YBL041W CAF16P43569 289 aa4.47□□□□□ -1.69
PRE7YBL041W YJR142WP47173 342 aa4.47□□□□□ -1.69
PRE7YBL041W IMD4P50094 524 aaKnown RBP4.47□□□□□ -1.69
PRE7YBL041W GPI1P53306 609 aa4.47□□□□□ -1.69
PRE7YBL041W DSL1P53847 754 aa4.47□□□□□ -1.69
PRE7YBL041W YMR102CQ03177 834 aa4.47□□□□□ -1.69
PRE7YBL041W API2Q04413 109 aa4.47□□□□□ -1.69
PRE7YBL041W SPC24Q04477 213 aa4.47□□□□□ -1.69
PRE7YBL041W VBA4Q04602 768 aaKnown RBP4.47□□□□□ -1.69
PRE7YBL041W RNH202Q05635 350 aa4.47□□□□□ -1.69
PRE7YBL041W GPI11Q06636 219 aa4.47□□□□□ -1.69
PRE7YBL041W VPS36Q06696 566 aa4.47□□□□□ -1.69
PRE7YBL041W ASA1Q06822 443 aa4.47□□□□□ -1.69
PRE7YBL041W RAF1Q06891 181 aa4.47□□□□□ -1.69
PRE7YBL041W SYO1Q07395 620 aa4.47□□□□□ -1.69
PRE7YBL041W IRC19Q07843 230 aa4.47□□□□□ -1.69
PRE7YBL041W ULA1Q12059 462 aa4.47□□□□□ -1.69
PRE7YBL041W RLM1Q12224 676 aa4.47□□□□□ -1.69
PRE7YBL041W FOL3Q12676 427 aaPredicted RBP4.47□□□□□ -1.69
PRE7YBL041W YAL064W-BO13512 126 aa4.46□□□□□ -1.7
PRE7YBL041W RHO1P06780 209 aaKnown RBP4.46□□□□□ -1.7
PRE7YBL041W PEP4P07267 405 aaKnown RBP4.46□□□□□ -1.7
PRE7YBL041W SPS100P13130 326 aa4.46□□□□□ -1.7
PRE7YBL041W RER1P25560 188 aa4.46□□□□□ -1.7
PRE7YBL041W ITR2P30606 609 aa4.46□□□□□ -1.7
PRE7YBL041W SAC1P32368 623 aaKnown RBP4.46□□□□□ -1.7
PRE7YBL041W ARP2P32381 391 aaKnown RBP4.46□□□□□ -1.7
PRE7YBL041W TIM12P32830 109 aa4.46□□□□□ -1.7
PRE7YBL041W TRS65P32893 560 aa4.46□□□□□ -1.7
PRE7YBL041W SLC1P33333 303 aa4.46□□□□□ -1.7
PRE7YBL041W ECM15P35195 104 aa4.46□□□□□ -1.7
PRE7YBL041W SKG1P36169 355 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 2447.9 ms