RNA–Protein interactions for RNA: ENST00000640311.1

KCNMA1-280, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

TSL 3

Gene KCNMA1, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-280	ENST00000640311	RC3H2	Q9HBD1	1191 aa	Known RBP	11.18	□□□□□ -0.62
KCNMA1-280	ENST00000640311	POLD4	Q9HCU8	107 aa		11.18	□□□□□ -0.62
KCNMA1-280	ENST00000640311	AGPAT5	Q9NUQ2	364 aa		11.18	□□□□□ -0.62
KCNMA1-280	ENST00000640311	RWDD3	Q9Y3V2	267 aa		11.18	□□□□□ -0.62
KCNMA1-280	ENST00000640311	MTCH2	Q9Y6C9	303 aa		11.18	□□□□□ -0.62
KCNMA1-280	ENST00000640311	MRPL42	Q9Y6G3	142 aa	Known RBP	11.18	□□□□□ -0.62
KCNMA1-280	ENST00000640311	CSPG5	O95196	566 aa		11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	EOMES	O95936	686 aa		11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	PDIA4	P13667	645 aa	Known RBP	11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	LIG1	P18858	919 aa		11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	MARCKS	P29966	332 aa	Predicted RBP	11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	LONP1	P36776	959 aa	Known RBP	11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	POU5F1B	Q06416	359 aa		11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	PTPRO	Q16827	1216 aa		11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	TMEM132A	Q24JP5	1023 aa		11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	ZBTB8OS	Q8IWT0	167 aa		11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	DEPTOR	Q8TB45	409 aa		11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	IFT74	Q96LB3	600 aa		11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	FAM105A	Q9NUU6	356 aa		11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	LOXHD1	Q8IVV2	1947 aa		11.17	□□□□□ -0.62
KCNMA1-280	ENST00000640311	ARID2	Q68CP9	1835 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	CCDC169	A6NNP5	214 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311		H3BNC9	293 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	TSPAN1	O60635	241 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	LPXN	O60711	386 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	RB1	P06400	928 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	AXL	P30530	894 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	RAB27A	P51159	221 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	GRIN1	Q05586	938 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	MBTD1	Q05BQ5	628 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	RAD51AP2	Q09MP3	1159 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	DHX8	Q14562	1220 aa	Known RBP	11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	PPP2R5A	Q15172	486 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	SPECC1	Q5M775	1068 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	NOTUM	Q6P988	496 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	KCNK18	Q7Z418	384 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	KCTD17	Q8N5Z5	321 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	HELQ	Q8TDG4	1101 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	KIFAP3	Q92845	792 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	CLP1	Q92989	425 aa	Known RBP	11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	LPP	Q93052	612 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	PGBD4	Q96DM1	585 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	CPB2	Q96IY4	423 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	ZNF396	Q96N95	335 aa	Predicted RBP	11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	PNMA5	Q96PV4	448 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	USP28	Q96RU2	1077 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	NFKBIZ	Q9BYH8	718 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	TRIM6	Q9C030	488 aa	Predicted RBP	11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	TMEM117	Q9H0C3	514 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	CSRNP2	Q9H175	543 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	C2orf40	Q9H1Z8	148 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	AAAS	Q9NRG9	546 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	TYW1	Q9NV66	732 aa	Known RBP	11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	DAXX	Q9UER7	740 aa	Predicted RBP	11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	PCDHB2	Q9Y5E7	798 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	PCDHB12	Q9Y5F1	795 aa		11.16	□□□□□ -0.62
KCNMA1-280	ENST00000640311	CDH23	Q9H251	3354 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	COL4A6	Q14031	1691 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	C5orf67	F2Z3F1	127 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	B4GALT5	O43286	388 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	HIP1R	O75146	1068 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	PLA2G4B	P0C869	781 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	ZSCAN22	P10073	491 aa	Predicted RBP	11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	POU3F3	P20264	500 aa	Predicted RBP	11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	HOXA11	P31270	313 aa	Predicted RBP	11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	TXLNA	P40222	546 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	NAMPT	P43490	491 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	KARS	Q15046	597 aa	Known RBP	11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	STK38	Q15208	465 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	PTPA	Q15257	358 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	HYI	Q5T013	277 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	RINT1	Q6NUQ1	792 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	GLB1L	Q6UWU2	654 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	ZNF598	Q86UK7	904 aa	Known RBP	11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	THNSL1	Q8IYQ7	743 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	LRRC43	Q8N309	656 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	BSND	Q8WZ55	320 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	DRC1	Q96MC2	740 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	CASD1	Q96PB1	797 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	TRAIP	Q9BWF2	469 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	PLVAP	Q9BX97	442 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	ALG13	Q9NP73	1137 aa	Known RBP	11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	RTN4	Q9NQC3	1192 aa	Known RBP	11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	LMCD1	Q9NZU5	365 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	TFIP11	Q9UBB9	837 aa	Known RBP	11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	CCDC39	Q9UFE4	941 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	INPP5F	Q9Y2H2	1132 aa		11.15	□□□□□ -0.62
KCNMA1-280	ENST00000640311	SFI1	A8K8P3	1242 aa		11.14	□□□□□ -0.63
KCNMA1-280	ENST00000640311	LINC00271	P0C7V0	271 aa		11.14	□□□□□ -0.63
KCNMA1-280	ENST00000640311	ATF7	P17544	494 aa	Predicted RBP	11.14	□□□□□ -0.63
KCNMA1-280	ENST00000640311	ARF4	P18085	180 aa	Predicted RBP	11.14	□□□□□ -0.63
KCNMA1-280	ENST00000640311	LAG3	P18627	525 aa		11.14	□□□□□ -0.63
KCNMA1-280	ENST00000640311	PEX3	P56589	373 aa		11.14	□□□□□ -0.63
KCNMA1-280	ENST00000640311	RNASEL	Q05823	741 aa	Known RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms