RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 LMAN2LQ9H0V9 348 aa21.17■□□□□ 0.98
TPM4-204ENST00000586499 POLR3FQ9H1D9 316 aaPredicted RBP21.17■□□□□ 0.98
TPM4-204ENST00000586499 NSUN3Q9H649 340 aaKnown RBP21.17■□□□□ 0.98
TPM4-204ENST00000586499 FAM105AQ9NUU6 356 aa21.17■□□□□ 0.98
TPM4-204ENST00000586499 ATG2AQ2TAZ0 1938 aa21.17■□□□□ 0.98
TPM4-204ENST00000586499 HOXA2O43364 376 aa21.16■□□□□ 0.98
TPM4-204ENST00000586499 PBX3P40426 434 aa21.16■□□□□ 0.98
TPM4-204ENST00000586499 NAALADL2Q58DX5 795 aa21.16■□□□□ 0.98
TPM4-204ENST00000586499 PADI6Q6TGC4 694 aa21.16■□□□□ 0.98
TPM4-204ENST00000586499 DTHD1Q6ZMT9 781 aa21.16■□□□□ 0.98
TPM4-204ENST00000586499 COLGALT1Q8NBJ5 622 aa21.16■□□□□ 0.98
TPM4-204ENST00000586499 SNX29Q8TEQ0 813 aa21.16■□□□□ 0.98
TPM4-204ENST00000586499 TRAIPQ9BWF2 469 aa21.16■□□□□ 0.98
TPM4-204ENST00000586499 POLD4Q9HCU8 107 aa21.16■□□□□ 0.98
TPM4-204ENST00000586499 KIAA1024Q9UPX6 916 aa21.16■□□□□ 0.98
TPM4-204ENST00000586499 PCDHB12Q9Y5F1 795 aa21.16■□□□□ 0.98
TPM4-204ENST00000586499 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.15■□□□□ 0.98
TPM4-204ENST00000586499 INO80B-WBP1J3KQ70 363 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 LAD1O00515 517 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 BMP1P13497 986 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 IRS1P35568 1242 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 PRPHP41219 470 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 TFDP1Q14186 410 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 UBXN11Q5T124 520 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 HAUS3Q68CZ6 603 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 POF1BQ8WVV4 589 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 SYMPKQ92797 1274 aaKnown RBP21.15■□□□□ 0.98
TPM4-204ENST00000586499 CPB2Q96IY4 423 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 UBE2ZQ9H832 354 aaPredicted RBP21.15■□□□□ 0.98
TPM4-204ENST00000586499 AAASQ9NRG9 546 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 DDX19AQ9NUU7 478 aaKnown RBP21.15■□□□□ 0.98
TPM4-204ENST00000586499 PCDHB2Q9Y5E7 798 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 PCDHGC5Q9Y5F6 944 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 PLXNA4Q9HCM2 1894 aa21.15■□□□□ 0.98
TPM4-204ENST00000586499 ARHGEF35A5YM69 484 aa21.14■□□□□ 0.97
TPM4-204ENST00000586499 TSPAN1O60635 241 aa21.14■□□□□ 0.97
TPM4-204ENST00000586499 ZNF623O75123 536 aa21.14■□□□□ 0.97
TPM4-204ENST00000586499 FGF18O76093 207 aa21.14■□□□□ 0.97
TPM4-204ENST00000586499 GTF2F1P35269 517 aaKnown RBP eCLIP21.14■□□□□ 0.971e-6■■■■□ 21.5
TPM4-204ENST00000586499 ATP2C1P98194 919 aaPredicted RBP21.14■□□□□ 0.97
TPM4-204ENST00000586499 MBTD1Q05BQ5 628 aa21.14■□□□□ 0.97
TPM4-204ENST00000586499 AAK1Q2M2I8 961 aa21.14■□□□□ 0.97
TPM4-204ENST00000586499 IFNLR1Q8IU57 520 aaPredicted RBP21.14■□□□□ 0.97
TPM4-204ENST00000586499 THNSL1Q8IYQ7 743 aa21.14■□□□□ 0.97
TPM4-204ENST00000586499 LRRC43Q8N309 656 aa21.14■□□□□ 0.97
TPM4-204ENST00000586499 MMTAG2Q9BU76 263 aaKnown RBP21.14■□□□□ 0.97
TPM4-204ENST00000586499 BHMT2Q9H2M3 363 aa21.14■□□□□ 0.97
TPM4-204ENST00000586499 FOXD4L1Q9NU39 408 aa21.14■□□□□ 0.97
TPM4-204ENST00000586499 CUL9Q8IWT3 2517 aa21.14■□□□□ 0.97
TPM4-204ENST00000586499 TCF20Q9UGU0 1960 aaKnown RBP21.14■□□□□ 0.97
TPM4-204ENST00000586499 E9PMD0 336 aa21.13■□□□□ 0.97
TPM4-204ENST00000586499 ERLIN2O94905 339 aa21.13■□□□□ 0.97
TPM4-204ENST00000586499 LAG3P18627 525 aa21.13■□□□□ 0.97
TPM4-204ENST00000586499 CYP11B2P19099 503 aa21.13■□□□□ 0.97
TPM4-204ENST00000586499 MUTP22033 750 aa21.13■□□□□ 0.97
TPM4-204ENST00000586499 KCNA5P22460 613 aa21.13■□□□□ 0.97
TPM4-204ENST00000586499 POU5F1BQ06416 359 aa21.13■□□□□ 0.97
TPM4-204ENST00000586499 HYAL1Q12794 435 aa21.13■□□□□ 0.97
TPM4-204ENST00000586499 KCNT2Q6UVM3 1135 aa21.13■□□□□ 0.97
TPM4-204ENST00000586499 EP400NLQ6ZTU2 488 aa21.13■□□□□ 0.97
TPM4-204ENST00000586499 MCPH1Q8NEM0 835 aa21.13■□□□□ 0.97
TPM4-204ENST00000586499 RAB34Q9BZG1 259 aa21.13■□□□□ 0.97
TPM4-204ENST00000586499 IGFLR1Q9H665 355 aa21.13■□□□□ 0.97
TPM4-204ENST00000586499 VPS37CA5D8V6 355 aaPredicted RBP21.12■□□□□ 0.97
TPM4-204ENST00000586499 LRRIQ4A6NIV6 560 aa21.12■□□□□ 0.97
TPM4-204ENST00000586499 B4GALT5O43286 388 aa21.12■□□□□ 0.97
TPM4-204ENST00000586499 SKIP12755 728 aa21.12■□□□□ 0.97
TPM4-204ENST00000586499 RAB27AP51159 221 aa21.12■□□□□ 0.97
TPM4-204ENST00000586499 AMHR2Q16671 573 aa21.12■□□□□ 0.97
TPM4-204ENST00000586499 KRT79Q5XKE5 535 aa21.12■□□□□ 0.97
TPM4-204ENST00000586499 AGMOQ6ZNB7 445 aa21.12■□□□□ 0.97
TPM4-204ENST00000586499 ADGRD2Q7Z7M1 963 aa21.12■□□□□ 0.97
TPM4-204ENST00000586499 ADAMTS19Q8TE59 1207 aa21.12■□□□□ 0.97
TPM4-204ENST00000586499 BSNDQ8WZ55 320 aa21.12■□□□□ 0.97
TPM4-204ENST00000586499 NECAB3Q96P71 396 aaPredicted RBP21.12■□□□□ 0.97
TPM4-204ENST00000586499 EIF2AQ9BY44 585 aaKnown RBP21.12■□□□□ 0.97
TPM4-204ENST00000586499 INPP5FQ9Y2H2 1132 aa21.12■□□□□ 0.97
TPM4-204ENST00000586499 BRWD1Q9NSI6 2320 aa21.12■□□□□ 0.97
TPM4-204ENST00000586499 VWA3AA6NCI4 1184 aa21.11■□□□□ 0.97
TPM4-204ENST00000586499 NT5C1B-RDH14C9J2C7 533 aa21.11■□□□□ 0.97
TPM4-204ENST00000586499 OFD1O75665 1012 aa21.11■□□□□ 0.97
TPM4-204ENST00000586499 AFF1P51825 1210 aaKnown RBP21.11■□□□□ 0.97
TPM4-204ENST00000586499 ERVFC1P60507 584 aa21.11■□□□□ 0.97
TPM4-204ENST00000586499 ZRSR1Q15695 479 aaKnown RBP21.11■□□□□ 0.97
TPM4-204ENST00000586499 KCNK18Q7Z418 384 aa21.11■□□□□ 0.97
TPM4-204ENST00000586499 MRPL10Q7Z7H8 261 aaKnown RBP21.11■□□□□ 0.97
TPM4-204ENST00000586499 CDR2LQ86X02 465 aaPredicted RBP21.11■□□□□ 0.97
TPM4-204ENST00000586499 ZNF558Q96NG5 402 aa21.11■□□□□ 0.97
TPM4-204ENST00000586499 NFKBIZQ9BYH8 718 aa21.11■□□□□ 0.97
TPM4-204ENST00000586499 H3BQ06 376 aaPredicted RBP21.1■□□□□ 0.97
TPM4-204ENST00000586499 ARF4P18085 180 aaPredicted RBP21.1■□□□□ 0.97
TPM4-204ENST00000586499 NOMO2Q5JPE7 1267 aa21.1■□□□□ 0.97
TPM4-204ENST00000586499 GLB1LQ6UWU2 654 aa21.1■□□□□ 0.97
TPM4-204ENST00000586499 SMG8Q8ND04 991 aaKnown RBP21.1■□□□□ 0.97
TPM4-204ENST00000586499 MICAL1Q8TDZ2 1067 aa21.1■□□□□ 0.97
TPM4-204ENST00000586499 PGBD4Q96DM1 585 aa21.1■□□□□ 0.97
TPM4-204ENST00000586499 PABPC5Q96DU9 382 aaKnown RBP21.1■□□□□ 0.97
TPM4-204ENST00000586499 MRPL9Q9BYD2 267 aaKnown RBP21.1■□□□□ 0.97
TPM4-204ENST00000586499 RNF39Q9H2S5 420 aa21.1■□□□□ 0.97
TPM4-204ENST00000586499 TBC1D13Q9NVG8 400 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms