RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 VPS52Q8N1B4 723 aa13.87□□□□□ -0.19
POLR2A-202ENST00000573603 MRPL43Q8N983 215 aaKnown RBP13.87□□□□□ -0.19
POLR2A-202ENST00000573603 TMEM87AQ8NBN3 555 aa13.87□□□□□ -0.19
POLR2A-202ENST00000573603 INO80BQ9C086 356 aaPredicted RBP13.87□□□□□ -0.19
POLR2A-202ENST00000573603 ZBP1Q9H171 429 aa13.87□□□□□ -0.19
POLR2A-202ENST00000573603 POMKQ9H5K3 350 aa13.87□□□□□ -0.19
POLR2A-202ENST00000573603 CYP26B1Q9NR63 512 aa13.87□□□□□ -0.19
POLR2A-202ENST00000573603 CHST12Q9NRB3 414 aa13.87□□□□□ -0.19
POLR2A-202ENST00000573603 GJB4Q9NTQ9 266 aa13.87□□□□□ -0.19
POLR2A-202ENST00000573603 TBC1D13Q9NVG8 400 aa13.87□□□□□ -0.19
POLR2A-202ENST00000573603 CXCL14O95715 111 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 SKIP12755 728 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 QARSP47897 775 aaKnown RBP13.86□□□□□ -0.19
POLR2A-202ENST00000573603 POLGP54098 1239 aaPredicted RBP13.86□□□□□ -0.19
POLR2A-202ENST00000573603 SCRN1Q12765 414 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 BMS1Q14692 1282 aaKnown RBP13.86□□□□□ -0.19
POLR2A-202ENST00000573603 NOMO2Q5JPE7 1267 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 RARS2Q5T160 578 aaKnown RBP13.86□□□□□ -0.19
POLR2A-202ENST00000573603 CES5AQ6NT32 575 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 NEK8Q86SG6 692 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 FBXL6Q8N531 539 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 C12orf76Q8N812 135 aaPredicted RBP13.86□□□□□ -0.19
POLR2A-202ENST00000573603 ZNF579Q8NAF0 562 aaKnown RBP13.86□□□□□ -0.19
POLR2A-202ENST00000573603 BCL7CQ8WUZ0 217 aaPredicted RBP13.86□□□□□ -0.19
POLR2A-202ENST00000573603 SLC7A3Q8WY07 619 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 TMEM143Q96AN5 459 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 JPH2Q9BR39 696 aaPredicted RBP13.86□□□□□ -0.19
POLR2A-202ENST00000573603 PHF20Q9BVI0 1012 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 TM6SF1Q9BZW5 370 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 NRDE2Q9H7Z3 1164 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 WRAP73Q9P2S5 460 aaPredicted RBP13.86□□□□□ -0.19
POLR2A-202ENST00000573603 DNAJB4Q9UDY4 337 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 COL4A3BPQ9Y5P4 624 aa13.86□□□□□ -0.19
POLR2A-202ENST00000573603 MARCH6O60337 910 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 CCNT1O60563 726 aaKnown RBP13.85□□□□□ -0.19
POLR2A-202ENST00000573603 CDKL5O76039 1030 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 SLC11A1P49279 550 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 RAB27AP51159 221 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 VCPP55072 806 aaKnown RBP13.85□□□□□ -0.19
POLR2A-202ENST00000573603 PPP2R5CQ13362 524 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 NCAPH2Q6IBW4 605 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 KANK3Q6NY19 840 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 PIK3AP1Q6ZUJ8 805 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 FAM177A1Q8N128 213 aaPredicted RBP13.85□□□□□ -0.19
POLR2A-202ENST00000573603 OXER1Q8TDS5 423 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 ASIC4Q96FT7 647 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 IGSF21Q96ID5 467 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 PHOX2BQ99453 314 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 LXNQ9BS40 222 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 TRAIPQ9BWF2 469 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 ADAM7Q9H2U9 754 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 KCNMB3Q9NPA1 279 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 AGPAT5Q9NUQ2 364 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 NR2E1Q9Y466 385 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 PIEZO1Q92508 2521 aa13.85□□□□□ -0.19
POLR2A-202ENST00000573603 DENND4AQ7Z401 1863 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 C2CD4DB7Z1M9 353 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 EPB41L2O43491 1005 aaKnown RBP13.84□□□□□ -0.19
POLR2A-202ENST00000573603 B4GALT3O60512 393 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 DKC1O60832 514 aaKnown RBP eCLIP13.84□□□□□ -0.19
POLR2A-202ENST00000573603 OFD1O75665 1012 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 SSBP05455 408 aaKnown RBP eCLIP13.84□□□□□ -0.19
POLR2A-202ENST00000573603 SRGAP2CP0DJJ0 459 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 GCFC2P16383 781 aaKnown RBP13.84□□□□□ -0.19
POLR2A-202ENST00000573603 EPCAMP16422 314 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 CYP4A11Q02928 519 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 POTEDQ86YR6 584 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 URGCPQ8TCY9 931 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 PSPC1Q8WXF1 523 aaKnown RBP13.84□□□□□ -0.19
POLR2A-202ENST00000573603 PGBD4Q96DM1 585 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 FAM20AQ96MK3 541 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 NECTIN4Q96NY8 510 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 IFT122Q9HBG6 1241 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 PCDHB2Q9Y5E7 798 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 STK36Q9NRP7 1315 aa13.84□□□□□ -0.19
POLR2A-202ENST00000573603 FAM205CA6NFA0 338 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 PDGFBP01127 241 aaPredicted RBP13.83□□□□□ -0.2
POLR2A-202ENST00000573603 P4HBP07237 508 aaKnown RBP13.83□□□□□ -0.2
POLR2A-202ENST00000573603 GALTP07902 379 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 CTSAP10619 480 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 XBP1P17861 261 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 YWHABP31946 246 aaKnown RBP13.83□□□□□ -0.2
POLR2A-202ENST00000573603 RFC5P40937 340 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 MTHFRP42898 656 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 PTPN5P54829 565 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 ITIH3Q06033 890 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 LAMTOR4Q0VGL1 99 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 CTTNQ14247 550 aaKnown RBP13.83□□□□□ -0.2
POLR2A-202ENST00000573603 EMC2Q15006 297 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 EARS2Q5JPH6 523 aaKnown RBP13.83□□□□□ -0.2
POLR2A-202ENST00000573603 PPP4R3AQ6IN85 833 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 AGMOQ6ZNB7 445 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 DDX53Q86TM3 631 aaKnown RBP13.83□□□□□ -0.2
POLR2A-202ENST00000573603 ZNF280BQ86YH2 543 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 KREMEN2Q8NCW0 462 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 FEZF2Q8TBJ5 459 aa13.83□□□□□ -0.2
POLR2A-202ENST00000573603 PRPF31Q8WWY3 499 aaKnown RBP13.83□□□□□ -0.2
POLR2A-202ENST00000573603 RSPH1Q8WYR4 309 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms