RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 PTENP60484 403 aa21.1■□□□□ 0.97
CPNE7-208ENST00000566398 PCBP1Q15365 356 aaKnown RBP eCLIP21.1■□□□□ 0.97
CPNE7-208ENST00000566398 RILPL1Q5EBL4 403 aa21.1■□□□□ 0.97
CPNE7-208ENST00000566398 MCPH1Q8NEM0 835 aa21.1■□□□□ 0.97
CPNE7-208ENST00000566398 ASAP3Q8TDY4 903 aa21.1■□□□□ 0.97
CPNE7-208ENST00000566398 PPP2R3CQ969Q6 453 aa21.1■□□□□ 0.97
CPNE7-208ENST00000566398 PABPC5Q96DU9 382 aaKnown RBP21.1■□□□□ 0.97
CPNE7-208ENST00000566398 BACH2Q9BYV9 841 aa21.1■□□□□ 0.97
CPNE7-208ENST00000566398 POLR3FQ9H1D9 316 aaPredicted RBP21.1■□□□□ 0.97
CPNE7-208ENST00000566398 LRWD1Q9UFC0 647 aa21.1■□□□□ 0.97
CPNE7-208ENST00000566398 STK24Q9Y6E0 443 aa21.1■□□□□ 0.97
CPNE7-208ENST00000566398 LOXHD1Q8IVV2 1947 aa21.1■□□□□ 0.97
CPNE7-208ENST00000566398 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.09■□□□□ 0.97
CPNE7-208ENST00000566398 ARHGEF35A5YM69 484 aa21.09■□□□□ 0.97
CPNE7-208ENST00000566398 INO80B-WBP1J3KQ70 363 aa21.09■□□□□ 0.97
CPNE7-208ENST00000566398 NCK2O43639 380 aa21.09■□□□□ 0.97
CPNE7-208ENST00000566398 MUTP22033 750 aa21.09■□□□□ 0.97
CPNE7-208ENST00000566398 DNAJB1P25685 340 aa21.09■□□□□ 0.97
CPNE7-208ENST00000566398 CCT6AP40227 531 aaKnown RBP21.09■□□□□ 0.97
CPNE7-208ENST00000566398 UBE3AQ05086 875 aa21.09■□□□□ 0.97
CPNE7-208ENST00000566398 CAPSQ13938 189 aa21.09■□□□□ 0.97
CPNE7-208ENST00000566398 CAMK1Q14012 370 aa21.09■□□□□ 0.97
CPNE7-208ENST00000566398 GLB1LQ6UWU2 654 aa21.09■□□□□ 0.97
CPNE7-208ENST00000566398 LRRC55Q6ZSA7 311 aa21.09■□□□□ 0.97
CPNE7-208ENST00000566398 ZNF558Q96NG5 402 aa21.09■□□□□ 0.97
CPNE7-208ENST00000566398 GLRA2P23416 452 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 PPM1AP35813 382 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 PRPHP41219 470 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 POU5F1BQ06416 359 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 NCBP1Q09161 790 aaKnown RBP21.08■□□□□ 0.97
CPNE7-208ENST00000566398 PDIA5Q14554 519 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 COL19A1Q14993 1142 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 LEXMQ3ZCV2 418 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 EP400NLQ6ZTU2 488 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 MAEAQ7L5Y9 396 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 IFNLR1Q8IU57 520 aaPredicted RBP21.08■□□□□ 0.97
CPNE7-208ENST00000566398 IGSF22Q8N9C0 903 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 LPPQ93052 612 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 PGBD4Q96DM1 585 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 GPRC5CQ9NQ84 441 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.08■□□□□ 0.97
CPNE7-208ENST00000566398 PCDHB2Q9Y5E7 798 aa21.08■□□□□ 0.97
CPNE7-208ENST00000566398 MUC3AQ02505 3323 aa21.08■□□□□ 0.96
CPNE7-208ENST00000566398 TSPAN1O60635 241 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 ZNF623O75123 536 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 HOXA11P31270 313 aaPredicted RBP21.07■□□□□ 0.96
CPNE7-208ENST00000566398 IRS1P35568 1242 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 HYAL1Q12794 435 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 LONRF3Q496Y0 759 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 LARP1BQ659C4 914 aaKnown RBP21.07■□□□□ 0.96
CPNE7-208ENST00000566398 PADI6Q6TGC4 694 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 KCNT2Q6UVM3 1135 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 DTHD1Q6ZMT9 781 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 SNX29Q8TEQ0 813 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 CCDC51Q96ER9 411 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 NFKBIZQ9BYH8 718 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 TLR9Q9NR96 1032 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 CLDND1Q9NY35 253 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 NLRC5Q86WI3 1866 aa21.07■□□□□ 0.96
CPNE7-208ENST00000566398 LRRIQ4A6NIV6 560 aa21.06■□□□□ 0.96
CPNE7-208ENST00000566398 TNFRSF10AO00220 468 aa21.06■□□□□ 0.96
CPNE7-208ENST00000566398 AXLP30530 894 aa21.06■□□□□ 0.96
CPNE7-208ENST00000566398 PBX3P40426 434 aa21.06■□□□□ 0.96
CPNE7-208ENST00000566398 MBTD1Q05BQ5 628 aa21.06■□□□□ 0.96
CPNE7-208ENST00000566398 NOTUMQ6P988 496 aa21.06■□□□□ 0.96
CPNE7-208ENST00000566398 MICAL1Q8TDZ2 1067 aa21.06■□□□□ 0.96
CPNE7-208ENST00000566398 PUF60Q9UHX1 559 aaKnown RBP21.06■□□□□ 0.96
CPNE7-208ENST00000566398 INPP5FQ9Y2H2 1132 aa21.06■□□□□ 0.96
CPNE7-208ENST00000566398 H3BQ06 376 aaPredicted RBP21.05■□□□□ 0.96
CPNE7-208ENST00000566398 CYP11B2P19099 503 aa21.05■□□□□ 0.96
CPNE7-208ENST00000566398 PLCB3Q01970 1234 aa21.05■□□□□ 0.96
CPNE7-208ENST00000566398 CUL4AQ13619 759 aa21.05■□□□□ 0.96
CPNE7-208ENST00000566398 NOMO2Q5JPE7 1267 aa21.05■□□□□ 0.96
CPNE7-208ENST00000566398 UBXN11Q5T124 520 aa21.05■□□□□ 0.96
CPNE7-208ENST00000566398 KRT79Q5XKE5 535 aa21.05■□□□□ 0.96
CPNE7-208ENST00000566398 MRPS27Q92552 414 aaKnown RBP21.05■□□□□ 0.96
CPNE7-208ENST00000566398 NECAB3Q96P71 396 aaPredicted RBP21.05■□□□□ 0.96
CPNE7-208ENST00000566398 IGFLR1Q9H665 355 aa21.05■□□□□ 0.96
CPNE7-208ENST00000566398 DDX19AQ9NUU7 478 aaKnown RBP21.05■□□□□ 0.96
CPNE7-208ENST00000566398 SPG21Q9NZD8 308 aa21.05■□□□□ 0.96
CPNE7-208ENST00000566398 KIAA1024Q9UPX6 916 aa21.05■□□□□ 0.96
CPNE7-208ENST00000566398 LZTS1Q9Y250 596 aa21.05■□□□□ 0.96
CPNE7-208ENST00000566398 MEIS3P2A8K0S8 358 aa21.04■□□□□ 0.96
CPNE7-208ENST00000566398 ATP2C1P98194 919 aaPredicted RBP21.04■□□□□ 0.96
CPNE7-208ENST00000566398 KRT17Q04695 432 aa21.04■□□□□ 0.96
CPNE7-208ENST00000566398 ECM1Q16610 540 aa21.04■□□□□ 0.96
CPNE7-208ENST00000566398 PUS10Q3MIT2 529 aaKnown RBP21.04■□□□□ 0.96
CPNE7-208ENST00000566398 ADGRD2Q7Z7M1 963 aa21.04■□□□□ 0.96
CPNE7-208ENST00000566398 CNNM3Q8NE01 707 aa21.04■□□□□ 0.96
CPNE7-208ENST00000566398 URGCPQ8TCY9 931 aa21.04■□□□□ 0.96
CPNE7-208ENST00000566398 BHMT2Q9H2M3 363 aa21.04■□□□□ 0.96
CPNE7-208ENST00000566398 PCDHGC5Q9Y5F6 944 aa21.04■□□□□ 0.96
CPNE7-208ENST00000566398 CNTNAP2Q9UHC6 1331 aa21.04■□□□□ 0.96
CPNE7-208ENST00000566398 CARNS1A5YM72 827 aa21.03■□□□□ 0.96
CPNE7-208ENST00000566398 PP2D1A8MPX8 630 aa21.03■□□□□ 0.96
CPNE7-208ENST00000566398 ZC3H11AO75152 810 aaKnown RBP eCLIP21.03■□□□□ 0.961e-6■■■■□ 24.7
CPNE7-208ENST00000566398 OFD1O75665 1012 aa21.03■□□□□ 0.96
CPNE7-208ENST00000566398 GTF2F1P35269 517 aaKnown RBP eCLIP21.03■□□□□ 0.961e-7■■■■■ 44.7
CPNE7-208ENST00000566398 ALDH7A1P49419 539 aaKnown RBP21.03■□□□□ 0.96
CPNE7-208ENST00000566398 BCAR1P56945 870 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms