RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 YIPF4Q9BSR8 244 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 TEX13AQ9BXU3 409 aaPredicted RBP6.32□□□□□ -1.4
SCAF11-214ENST00000550893 ADAM7Q9H2U9 754 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 SMOC1Q9H4F8 434 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 PCDH18Q9HCL0 1135 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 BABAM1Q9NWV8 329 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 RTEL1Q9NZ71 1219 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 MYOTQ9UBF9 498 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 TSPYL4Q9UJ04 414 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 ARAP2Q8WZ64 1704 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 ERVV-1B6SEH8 477 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 SMARCA5O60264 1052 aaPredicted RBP6.31□□□□□ -1.4
SCAF11-214ENST00000550893 GRK2P25098 689 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 THBS2P35442 1172 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 GRK3P35626 688 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 SARSP49591 514 aaKnown RBP6.31□□□□□ -1.4
SCAF11-214ENST00000550893 NKX3-2P78367 333 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 KIZQ2M2Z5 673 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 NT5DC1Q5TFE4 455 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 SUSD4Q5VX71 490 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 FOXB2Q5VYV0 432 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 CLEC4GQ6UXB4 293 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 C2CD5Q86YS7 1000 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 IFNL3Q8IZI9 196 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 ZBTB38Q8NAP3 1195 aaPredicted RBP6.31□□□□□ -1.4
SCAF11-214ENST00000550893 KYQ8NBH2 561 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 RTF1Q92541 710 aaKnown RBP6.31□□□□□ -1.4
SCAF11-214ENST00000550893 TOE1Q96GM8 510 aaKnown RBP6.31□□□□□ -1.4
SCAF11-214ENST00000550893 CDC6Q99741 560 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 BRIP1Q9BX63 1249 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 SLC6A20Q9NP91 592 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 NGRNQ9NPE2 291 aaKnown RBP6.31□□□□□ -1.4
SCAF11-214ENST00000550893 NMRK2Q9NPI5 230 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 DTLQ9NZJ0 730 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 NTMQ9P121 344 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 CHPF2Q9P2E5 772 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 PAPPA2Q9BXP8 1791 aa6.31□□□□□ -1.4
SCAF11-214ENST00000550893 TRPM7Q96QT4 1865 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 FAM221BA6H8Z2 402 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 KRIT1O00522 736 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 PRRG2O14669 202 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 SLC27A2O14975 620 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 FAM153BP0C7A2 387 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 MYL6BP14649 208 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 RASA3Q14644 834 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 FAM209AQ5JX71 171 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 TEPPQ6URK8 271 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 OTOP3Q7RTS5 596 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 FRMD5Q7Z6J6 570 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 SCUBE1Q8IWY4 988 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 TTLL6Q8N841 843 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 CNBD1Q8NA66 436 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 PHOSPHO1Q8TCT1 267 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 TSR2Q969E8 191 aaKnown RBP6.3□□□□□ -1.4
SCAF11-214ENST00000550893 KCNJ15Q99712 375 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 ISCA1Q9BUE6 129 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 IFT57Q9NWB7 429 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 ASH2LQ9UBL3 628 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 TRAF6Q9Y4K3 522 aa6.3□□□□□ -1.4
SCAF11-214ENST00000550893 POLR2AP24928 1970 aaKnown RBP6.29□□□□□ -1.4
SCAF11-214ENST00000550893 NCANO14594 1321 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 ZNF541Q9H0D2 1346 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 FANCIQ9NVI1 1328 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 LAMB1P07942 1786 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 TRBV23-1A0A0A0MS06 115 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 FOXD2O60548 495 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-214ENST00000550893 MAFKO60675 156 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 LRG1P02750 347 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 SOD2P04179 222 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 HOXB7P09629 217 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 COL6A2P12110 1019 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 GPTP24298 496 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 RPL13P26373 211 aaKnown RBP6.29□□□□□ -1.4
SCAF11-214ENST00000550893 HMGB2P26583 209 aaKnown RBP6.29□□□□□ -1.4
SCAF11-214ENST00000550893 C1QTNF8P60827 252 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 ADAM9Q13443 819 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 DALRD3Q5D0E6 543 aaKnown RBP6.29□□□□□ -1.4
SCAF11-214ENST00000550893 CYP4F22Q6NT55 531 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 G2E3Q7L622 706 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 ZNF761Q86XN6 746 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-214ENST00000550893 RBM12BQ8IXT5 1001 aaKnown RBP6.29□□□□□ -1.4
SCAF11-214ENST00000550893 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCAF11-214ENST00000550893 DEPDC7Q96QD5 511 aa6.29□□□□□ -1.4
SCAF11-214ENST00000550893 DDX21Q9NR30 783 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCAF11-214ENST00000550893 NIP7Q9Y221 180 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCAF11-214ENST00000550893 KDM2BQ8NHM5 1336 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 HTTP42858 3142 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 ECM29Q5VYK3 1845 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 B8ZZF3 427 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 NOBOXO60393 691 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 COPS6Q7L5N1 327 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 DPH6Q7L8W6 267 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 NGEFQ8N5V2 710 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 ADAMTS17Q8TE56 1095 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 CLEC4DQ8WXI8 215 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 EXOC2Q96KP1 924 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 TEPSINQ96N21 525 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 IPPKQ9H8X2 491 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 USP40Q9NVE5 1235 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms