RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 EPHA5P54756 1037 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 MRPS9P82933 396 aaKnown RBP7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 KIF23Q02241 960 aaPredicted RBP7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 POU5F1BQ06416 359 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 EGR3Q06889 387 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 CHAF1AQ13111 956 aaPredicted RBP7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 EZH2Q15910 746 aaKnown RBP7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 UGT8Q16880 541 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 DUSP27Q5VZP5 1158 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 KCTD1Q719H9 257 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 COA7Q96BR5 231 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 C1GALT1C1Q96EU7 318 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 MVB12AQ96EY5 273 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 MFSD14AQ96MC6 490 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 MPHOSPH9Q99550 1183 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 TMEM60Q9H2L4 133 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 CASS4Q9NQ75 786 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 FNIP2Q9P278 1114 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 TELO2Q9Y4R8 837 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 PPP2R3BQ9Y5P8 575 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 ARHGEF28Q8N1W1 1705 aaKnown RBP7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 ANKARQ7Z5J8 1434 aa7.56□□□□□ -1.2
TGFBR1-208ENST00000550253 SPATA31A5Q5VU36 1347 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 SPATA31A7Q8IWB4 1347 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 CAMTA1Q9Y6Y1 1673 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 FAM90A27PA6NNH2 459 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 FADS2P1A8MWK0 482 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 H3BML4 177 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 KRIT1O00522 736 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 BUB1BO60566 1050 aaPredicted RBP7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 C4BPAP04003 597 aaKnown RBP7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 PLA2G4EQ3MJ16 856 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 PITRM1Q5JRX3 1037 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 ANO1Q5XXA6 986 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 C1orf228Q6PIY5 440 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 ARHGAP27Q6ZUM4 889 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 SKAP1Q86WV1 359 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 FBXL6Q8N531 539 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 JMJD8Q96S16 334 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 TNFRSF10DQ9UBN6 386 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 FBLN5Q9UBX5 448 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 RWDD3Q9Y3V2 267 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 TULP4Q9NRJ4 1543 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 TOPAZ1Q8N9V7 1692 aa7.55□□□□□ -1.2
TGFBR1-208ENST00000550253 ELL2O00472 640 aaPredicted RBP7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 SETSIPP0DME0 302 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 ZKSCAN1P17029 563 aaPredicted RBP7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 GJA4P35212 333 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 STK3Q13188 491 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 SEMA5AQ13591 1074 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 LONRF1Q17RB8 773 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 EMC4Q5J8M3 183 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 CCDC149Q6ZUS6 474 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 NME9Q86XW9 330 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 KIAA0319LQ8IZA0 1049 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 HERPUD2Q9BSE4 406 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 G6PC3Q9BUM1 346 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 RSAD1Q9HA92 442 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 ATP13A1Q9HD20 1204 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 RAXQ9Y2V3 346 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 ITSN1Q15811 1721 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 PITPNM2Q9BZ72 1349 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 DHX57Q6P158 1386 aaKnown RBP7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 LMO7Q8WWI1 1683 aa7.54□□□□□ -1.2
TGFBR1-208ENST00000550253 PRSS38A1L453 326 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 HMGB1P1B2RPK0 211 aaPredicted RBP7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 FAM227AF5H4B4 570 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 PIP5K1CO60331 668 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 MTHFD2P13995 350 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 PTPN1P18031 435 aaKnown RBP7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 HALP42357 657 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 CORO7P57737 925 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 FAM193AP78312 1265 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 ALDH6A1Q02252 535 aaKnown RBP7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 UAP1L1Q3KQV9 507 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 ZBTB41Q5SVQ8 909 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 CYP4F22Q6NT55 531 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 CCDC62Q6P9F0 684 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 ESPNLQ6ZVH7 1005 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 NRKQ7Z2Y5 1582 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 SLCO6A1Q86UG4 719 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 DENND1CQ8IV53 801 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 RBM12BQ8IXT5 1001 aaKnown RBP7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 ANKRD42Q8N9B4 389 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 RAX2Q96IS3 184 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 PRDM12Q9H4Q4 367 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 TERF2IPQ9NYB0 399 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 LUZP4Q9P127 313 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 STOML1Q9UBI4 398 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 TMPRSS11EQ9UL52 423 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 ATP7BP35670 1465 aa7.53□□□□□ -1.2
TGFBR1-208ENST00000550253 SLC27A2O14975 620 aa7.52□□□□□ -1.2
TGFBR1-208ENST00000550253 TADA3O75528 432 aa7.52□□□□□ -1.2
TGFBR1-208ENST00000550253 WFS1O76024 890 aa7.52□□□□□ -1.2
TGFBR1-208ENST00000550253 UBXN7O94888 489 aa7.52□□□□□ -1.2
TGFBR1-208ENST00000550253 LPLP06858 475 aa7.52□□□□□ -1.2
TGFBR1-208ENST00000550253 TYRP1P17643 537 aa7.52□□□□□ -1.2
TGFBR1-208ENST00000550253 SLC5A3P53794 718 aa7.52□□□□□ -1.2
TGFBR1-208ENST00000550253 MUM1Q2TAK8 710 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms