RNA–Protein interactions for RNA: ENST00000546710.2

LINC02404-201, Transcript of long intergenic non-protein coding RNA 2404, humanhuman

TSL 5 BASIC

Gene LINC02404, Length 1,188 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02404-201ENST00000546710 ARHGEF18Q6ZSZ5 1173 aa6.9□□□□□ -1.3
LINC02404-201ENST00000546710 Q6ZUG5 572 aa6.9□□□□□ -1.3
LINC02404-201ENST00000546710 DEFB123Q8N688 67 aa6.9□□□□□ -1.3
LINC02404-201ENST00000546710 PTPN18Q99952 460 aa6.9□□□□□ -1.3
LINC02404-201ENST00000546710 KRTAP3-1Q9BYR8 98 aa6.9□□□□□ -1.3
LINC02404-201ENST00000546710 SLC52A2Q9HAB3 445 aa6.9□□□□□ -1.3
LINC02404-201ENST00000546710 SAGE1Q9NXZ1 904 aa6.9□□□□□ -1.3
LINC02404-201ENST00000546710 NDOR1Q9UHB4 597 aa6.9□□□□□ -1.3
LINC02404-201ENST00000546710 HDAC9Q9UKV0 1011 aa6.9□□□□□ -1.3
LINC02404-201ENST00000546710 ATP23Q9Y6H3 246 aa6.9□□□□□ -1.3
LINC02404-201ENST00000546710 CRB1P82279 1406 aa6.9□□□□□ -1.31
LINC02404-201ENST00000546710 NAIPQ13075 1403 aa6.9□□□□□ -1.31
LINC02404-201ENST00000546710 NPEPPSL1A6NEC2 478 aa6.89□□□□□ -1.31
LINC02404-201ENST00000546710 H0YGN5 161 aa6.89□□□□□ -1.31
LINC02404-201ENST00000546710 ZNF561-AS1K7EIQ3 104 aa6.89□□□□□ -1.31
LINC02404-201ENST00000546710 KCNK3O14649 394 aa6.89□□□□□ -1.31
LINC02404-201ENST00000546710 EPHB4P54760 987 aa6.89□□□□□ -1.31
LINC02404-201ENST00000546710 CRY1Q16526 586 aa6.89□□□□□ -1.31
LINC02404-201ENST00000546710 ZXDCQ2QGD7 858 aaPredicted RBP6.89□□□□□ -1.31
LINC02404-201ENST00000546710 FIGNQ5HY92 759 aa6.89□□□□□ -1.31
LINC02404-201ENST00000546710 ZC3H7AQ8IWR0 971 aaKnown RBP6.89□□□□□ -1.31
LINC02404-201ENST00000546710 CNTROBQ8N137 903 aa6.89□□□□□ -1.31
LINC02404-201ENST00000546710 TTC9BQ8N6N2 239 aa6.89□□□□□ -1.31
LINC02404-201ENST00000546710 JADE2Q9NQC1 790 aa6.89□□□□□ -1.31
LINC02404-201ENST00000546710 ST6GALNAC2Q9UJ37 374 aa6.89□□□□□ -1.31
LINC02404-201ENST00000546710 CCNL1Q9UK58 526 aaPredicted RBP6.89□□□□□ -1.31
LINC02404-201ENST00000546710 GCC2Q8IWJ2 1684 aa6.89□□□□□ -1.31
LINC02404-201ENST00000546710 PKD1L3Q7Z443 1732 aa6.88□□□□□ -1.31
LINC02404-201ENST00000546710 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.88□□□□□ -1.31
LINC02404-201ENST00000546710 H0Y858 1186 aa6.88□□□□□ -1.31
LINC02404-201ENST00000546710 RASGRP1O95267 797 aa6.88□□□□□ -1.31
LINC02404-201ENST00000546710 DPEP1P16444 411 aa6.88□□□□□ -1.31
LINC02404-201ENST00000546710 FAM47CQ5HY64 1035 aa6.88□□□□□ -1.31
LINC02404-201ENST00000546710 ZC3H12BQ5HYM0 836 aaKnown RBP6.88□□□□□ -1.31
LINC02404-201ENST00000546710 CPZQ66K79 652 aa6.88□□□□□ -1.31
LINC02404-201ENST00000546710 EP400NLQ6ZTU2 488 aa6.88□□□□□ -1.31
LINC02404-201ENST00000546710 GPR155Q7Z3F1 870 aa6.88□□□□□ -1.31
LINC02404-201ENST00000546710 PNMA8AQ86V59 439 aaPredicted RBP6.88□□□□□ -1.31
LINC02404-201ENST00000546710 CISD2Q8N5K1 135 aaKnown RBP6.88□□□□□ -1.31
LINC02404-201ENST00000546710 CHST13Q8NET6 341 aa6.88□□□□□ -1.31
LINC02404-201ENST00000546710 AJUBAQ96IF1 538 aa6.88□□□□□ -1.31
LINC02404-201ENST00000546710 SMURF1Q9HCE7 757 aa6.88□□□□□ -1.31
LINC02404-201ENST00000546710 ARHGAP28Q9P2N2 729 aa6.88□□□□□ -1.31
LINC02404-201ENST00000546710 MYO5BQ9ULV0 1848 aa6.87□□□□□ -1.31
LINC02404-201ENST00000546710 GSTA4O15217 222 aa6.87□□□□□ -1.31
LINC02404-201ENST00000546710 GPR42O15529 346 aa6.87□□□□□ -1.31
LINC02404-201ENST00000546710 ZNF20P17024 532 aa6.87□□□□□ -1.31
LINC02404-201ENST00000546710 CSF2RBP32927 897 aa6.87□□□□□ -1.31
LINC02404-201ENST00000546710 GJA4P35212 333 aa6.87□□□□□ -1.31
LINC02404-201ENST00000546710 NOGQ13253 232 aa6.87□□□□□ -1.31
LINC02404-201ENST00000546710 PUM1Q14671 1186 aaKnown RBP eCLIP6.87□□□□□ -1.31
LINC02404-201ENST00000546710 ICAM4Q14773 271 aa6.87□□□□□ -1.31
LINC02404-201ENST00000546710 SF3A1Q15459 793 aaKnown RBP6.87□□□□□ -1.31
LINC02404-201ENST00000546710 RALYLQ86SE5 291 aaKnown RBP6.87□□□□□ -1.31
LINC02404-201ENST00000546710 GSTCDQ8NEC7 633 aa6.87□□□□□ -1.31
LINC02404-201ENST00000546710 SLC7A14Q8TBB6 771 aa6.87□□□□□ -1.31
LINC02404-201ENST00000546710 MKL1Q969V6 931 aa6.87□□□□□ -1.31
LINC02404-201ENST00000546710 RRP7BPQ9NSQ0 103 aa6.87□□□□□ -1.31
LINC02404-201ENST00000546710 ACEP12821 1306 aa6.86□□□□□ -1.31
LINC02404-201ENST00000546710 EFCAB14O75071 495 aa6.86□□□□□ -1.31
LINC02404-201ENST00000546710 C4BPAP04003 597 aaKnown RBP6.86□□□□□ -1.31
LINC02404-201ENST00000546710 LACTBP83111 547 aaPredicted RBP6.86□□□□□ -1.31
LINC02404-201ENST00000546710 SOGA3Q5TF21 947 aa6.86□□□□□ -1.31
LINC02404-201ENST00000546710 SLFN13Q68D06 897 aa6.86□□□□□ -1.31
LINC02404-201ENST00000546710 CIR1Q86X95 450 aaPredicted RBP6.86□□□□□ -1.31
LINC02404-201ENST00000546710 C1QTNF1Q9BXJ1 281 aa6.86□□□□□ -1.31
LINC02404-201ENST00000546710 C1QTNF3Q9BXJ4 246 aa6.86□□□□□ -1.31
LINC02404-201ENST00000546710 KATNBL1Q9H079 304 aa6.86□□□□□ -1.31
LINC02404-201ENST00000546710 MEGF9Q9H1U4 602 aa6.86□□□□□ -1.31
LINC02404-201ENST00000546710 DDX21Q9NR30 783 aaKnown RBP eCLIP6.86□□□□□ -1.31
LINC02404-201ENST00000546710 PTPN22Q9Y2R2 807 aa6.86□□□□□ -1.31
LINC02404-201ENST00000546710 COQ6Q9Y2Z9 468 aa6.86□□□□□ -1.31
LINC02404-201ENST00000546710 CASKIN1Q8WXD9 1431 aa6.85□□□□□ -1.31
LINC02404-201ENST00000546710 KIF7Q2M1P5 1343 aa6.85□□□□□ -1.31
LINC02404-201ENST00000546710 ESYT3A0FGR9 886 aa6.85□□□□□ -1.31
LINC02404-201ENST00000546710 PRAMEF25A6NGN4 478 aa6.85□□□□□ -1.31
LINC02404-201ENST00000546710 CLASP2O75122 1294 aaKnown RBP6.85□□□□□ -1.31
LINC02404-201ENST00000546710 CNOT4O95628 575 aaKnown RBP6.85□□□□□ -1.31
LINC02404-201ENST00000546710 SEC23AQ15436 765 aa6.85□□□□□ -1.31
LINC02404-201ENST00000546710 TRIM61Q5EBN2 209 aa6.85□□□□□ -1.31
LINC02404-201ENST00000546710 FBXO46Q6PJ61 603 aaPredicted RBP6.85□□□□□ -1.31
LINC02404-201ENST00000546710 REXO1L1PQ8IX06 675 aa6.85□□□□□ -1.31
LINC02404-201ENST00000546710 ZSWIM2Q8NEG5 633 aa6.85□□□□□ -1.31
LINC02404-201ENST00000546710 THAP3Q8WTV1 239 aaPredicted RBP6.85□□□□□ -1.31
LINC02404-201ENST00000546710 SCLYQ96I15 445 aa6.85□□□□□ -1.31
LINC02404-201ENST00000546710 DNAJC2Q99543 621 aaKnown RBP6.85□□□□□ -1.31
LINC02404-201ENST00000546710 SFMBT1Q9UHJ3 866 aa6.85□□□□□ -1.31
LINC02404-201ENST00000546710 MYRFQ9Y2G1 1151 aa6.85□□□□□ -1.31
LINC02404-201ENST00000546710 NRXN1Q9ULB1 1477 aa6.85□□□□□ -1.31
LINC02404-201ENST00000546710 ZNF888P0CJ79 500 aaPredicted RBP6.84□□□□□ -1.31
LINC02404-201ENST00000546710 PTGS1P23219 599 aa6.84□□□□□ -1.31
LINC02404-201ENST00000546710 AOAHP28039 575 aa6.84□□□□□ -1.31
LINC02404-201ENST00000546710 MC4RP32245 332 aa6.84□□□□□ -1.31
LINC02404-201ENST00000546710 FSTL4Q6MZW2 842 aa6.84□□□□□ -1.31
LINC02404-201ENST00000546710 NGDNQ8NEJ9 315 aaKnown RBP6.84□□□□□ -1.31
LINC02404-201ENST00000546710 DVL3Q92997 716 aaPredicted RBP6.84□□□□□ -1.31
LINC02404-201ENST00000546710 MAGEB10Q96LZ2 347 aaPredicted RBP6.84□□□□□ -1.31
LINC02404-201ENST00000546710 CD248Q9HCU0 757 aa6.84□□□□□ -1.31
LINC02404-201ENST00000546710 INCENPQ9NQS7 918 aa6.84□□□□□ -1.31
LINC02404-201ENST00000546710 BTBD7Q9P203 1132 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms