RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 ARID2Q68CP9 1835 aa24.39■■□□□ 1.49
NDUFS3-210ENST00000533105 FGF18O76093 207 aa24.38■■□□□ 1.49
NDUFS3-210ENST00000533105 RPA1P27694 616 aa24.38■■□□□ 1.49
NDUFS3-210ENST00000533105 IRS1P35568 1242 aa24.38■■□□□ 1.49
NDUFS3-210ENST00000533105 ARL2P36404 184 aa24.38■■□□□ 1.49
NDUFS3-210ENST00000533105 FXR2P51116 673 aaKnown RBP eCLIP24.38■■□□□ 1.49
NDUFS3-210ENST00000533105 HAUS3Q68CZ6 603 aa24.38■■□□□ 1.49
NDUFS3-210ENST00000533105 TRAIPQ9BWF2 469 aa24.38■■□□□ 1.49
NDUFS3-210ENST00000533105 POLR3FQ9H1D9 316 aaPredicted RBP24.38■■□□□ 1.49
NDUFS3-210ENST00000533105 CLDND1Q9NY35 253 aa24.38■■□□□ 1.49
NDUFS3-210ENST00000533105 LRWD1Q9UFC0 647 aa24.38■■□□□ 1.49
NDUFS3-210ENST00000533105 INO80B-WBP1J3KQ70 363 aa24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 ERLIN2O94905 339 aa24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 CCT6AP40227 531 aaKnown RBP24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 RAB27AP51159 221 aa24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 PTENP60484 403 aa24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 HYAL1Q12794 435 aa24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 CAPSQ13938 189 aa24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 CSPP1Q1MSJ5 1256 aa24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 MICAL1Q8TDZ2 1067 aa24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 PABPC5Q96DU9 382 aaKnown RBP24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 GPRC5CQ9NQ84 441 aa24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 DBR1Q9UK59 544 aaKnown RBP24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 TTC28Q96AY4 2481 aa24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 MYO7AQ13402 2215 aa24.37■■□□□ 1.49
NDUFS3-210ENST00000533105 H3BQ06 376 aaPredicted RBP24.36■■□□□ 1.49
NDUFS3-210ENST00000533105 TNFRSF10AO00220 468 aa24.36■■□□□ 1.49
NDUFS3-210ENST00000533105 GLRA2P23416 452 aa24.36■■□□□ 1.49
NDUFS3-210ENST00000533105 PBX3P40426 434 aa24.36■■□□□ 1.49
NDUFS3-210ENST00000533105 KCNT2Q6UVM3 1135 aa24.36■■□□□ 1.49
NDUFS3-210ENST00000533105 ZNF558Q96NG5 402 aa24.36■■□□□ 1.49
NDUFS3-210ENST00000533105 MRPL9Q9BYD2 267 aaKnown RBP24.36■■□□□ 1.49
NDUFS3-210ENST00000533105 RAB34Q9BZG1 259 aa24.36■■□□□ 1.49
NDUFS3-210ENST00000533105 INPP5FQ9Y2H2 1132 aa24.36■■□□□ 1.49
NDUFS3-210ENST00000533105 PCDHB2Q9Y5E7 798 aa24.36■■□□□ 1.49
NDUFS3-210ENST00000533105 TCF20Q9UGU0 1960 aaKnown RBP24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 ARHGEF35A5YM69 484 aa24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 MEIS3P2A8K0S8 358 aa24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 NCK2O43639 380 aa24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 HOXA11P31270 313 aaPredicted RBP24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 GTF2F1P35269 517 aaKnown RBP eCLIP24.35■■□□□ 1.495e-6■■□□□ 13.8
NDUFS3-210ENST00000533105 UBE3AQ05086 875 aa24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 LEXMQ3ZCV2 418 aa24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 RILPL1Q5EBL4 403 aa24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 LARP1BQ659C4 914 aaKnown RBP24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 GLB1LQ6UWU2 654 aa24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 PPP2R3CQ969Q6 453 aa24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 PGBD4Q96DM1 585 aa24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 BACH2Q9BYV9 841 aa24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 PCDHGC5Q9Y5F6 944 aa24.35■■□□□ 1.49
NDUFS3-210ENST00000533105 BRWD1Q9NSI6 2320 aa24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 LAD1O00515 517 aa24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 ZNF623O75123 536 aa24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 POU5F1BQ06416 359 aa24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 NCBP1Q09161 790 aaKnown RBP24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 PDIA5Q14554 519 aa24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 ECM1Q16610 540 aa24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 PADI6Q6TGC4 694 aa24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 ADGRD2Q7Z7M1 963 aa24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 RBM23Q86U06 439 aaKnown RBP24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 MCPH1Q8NEM0 835 aa24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 SNX29Q8TEQ0 813 aa24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 TLR9Q9NR96 1032 aa24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 KIAA1024Q9UPX6 916 aa24.34■■□□□ 1.49
NDUFS3-210ENST00000533105 LRRIQ4A6NIV6 560 aa24.33■■□□□ 1.49
NDUFS3-210ENST00000533105 TSPAN1O60635 241 aa24.33■■□□□ 1.49
NDUFS3-210ENST00000533105 MBTD1Q05BQ5 628 aa24.33■■□□□ 1.49
NDUFS3-210ENST00000533105 PCBP1Q15365 356 aaKnown RBP eCLIP24.33■■□□□ 1.49
NDUFS3-210ENST00000533105 UBXN11Q5T124 520 aa24.33■■□□□ 1.49
NDUFS3-210ENST00000533105 DTHD1Q6ZMT9 781 aa24.33■■□□□ 1.49
NDUFS3-210ENST00000533105 IGSF22Q8N9C0 903 aa24.33■■□□□ 1.49
NDUFS3-210ENST00000533105 CPB2Q96IY4 423 aa24.33■■□□□ 1.49
NDUFS3-210ENST00000533105 PUF60Q9UHX1 559 aaKnown RBP24.33■■□□□ 1.49
NDUFS3-210ENST00000533105 OFD1O75665 1012 aa24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 MUTP22033 750 aa24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 PPM1AP35813 382 aa24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 NRIP1P48552 1158 aa24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 ERVFC1P60507 584 aa24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 COL19A1Q14993 1142 aa24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 IL17AQ16552 155 aa24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 NOMO2Q5JPE7 1267 aa24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 PTCRAQ6ISU1 281 aaPredicted RBP24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 NOTUMQ6P988 496 aa24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 IFNLR1Q8IU57 520 aaPredicted RBP24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 MRPS27Q92552 414 aaKnown RBP24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 DDX19AQ9NUU7 478 aaKnown RBP24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 SPG21Q9NZD8 308 aa24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 STK24Q9Y6E0 443 aa24.32■■□□□ 1.48
NDUFS3-210ENST00000533105 ATG2AQ2TAZ0 1938 aa24.31■■□□□ 1.48
NDUFS3-210ENST00000533105 PP2D1A8MPX8 630 aa24.31■■□□□ 1.48
NDUFS3-210ENST00000533105 NT5C1B-RDH14C9J2C7 533 aa24.31■■□□□ 1.48
NDUFS3-210ENST00000533105 LINC01565O15544 149 aa24.31■■□□□ 1.48
NDUFS3-210ENST00000533105 ZC3H11AO75152 810 aaKnown RBP eCLIP24.31■■□□□ 1.48
NDUFS3-210ENST00000533105 AXLP30530 894 aa24.31■■□□□ 1.48
NDUFS3-210ENST00000533105 PRPHP41219 470 aa24.31■■□□□ 1.48
NDUFS3-210ENST00000533105 ALDH7A1P49419 539 aaKnown RBP24.31■■□□□ 1.48
NDUFS3-210ENST00000533105 BCAR1P56945 870 aa24.31■■□□□ 1.48
NDUFS3-210ENST00000533105 PLCB3Q01970 1234 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms