RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 MEIS3P2A8K0S8 358 aa17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 SKIP12755 728 aa17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 XRCC6P12956 609 aaKnown RBP eCLIP17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 PBX3P40426 434 aa17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 RABEP1Q15276 862 aa17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 ZNF174Q15697 407 aa17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 IFNLR1Q8IU57 520 aaPredicted RBP17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 RNF149Q8NC42 400 aa17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 PIGOQ8TEQ8 1089 aa17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 MRPS27Q92552 414 aaKnown RBP17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 LPPQ93052 612 aa17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 PPP2R3CQ969Q6 453 aa17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 MSLNLQ96KJ4 702 aa17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 ZNF558Q96NG5 402 aa17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 CLEC1BQ9P126 229 aa17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 C5orf42Q9H799 3197 aa17.62■□□□□ 0.41
LDLRAD3-205ENST00000532490 A0A087WWV3 80 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 DGAT1O75907 488 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 GLP2RO95838 553 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 U2AF2P26368 475 aaKnown RBP eCLIP17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 ARL2P36404 184 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 NRIP1P48552 1158 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 RAB27AP51159 221 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 PTENP60484 403 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 POU5F1BQ06416 359 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 MXD4Q14582 209 aaPredicted RBP17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 UBXN11Q5T124 520 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 PDE12Q6L8Q7 609 aaKnown RBP17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 MRPL10Q7Z7H8 261 aaKnown RBP17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 CATSPER3Q86XQ3 398 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 NOSTRINQ8IVI9 506 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 SLC39A11Q8N1S5 342 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 C4orf32Q8N8J7 132 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 FAM184AQ8NB25 1140 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 ASAP3Q8TDY4 903 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 RSPH1Q8WYR4 309 aa17.61■□□□□ 0.41
LDLRAD3-205ENST00000532490 MBTPS2O43462 519 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 MED24O75448 989 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 OFD1O75665 1012 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 OR52Z1P0C646 297 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 PPM1AP35813 382 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 TECP42680 631 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 TRAPPC10P48553 1259 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 SMAD2Q15796 467 aaKnown RBP17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 TTC38Q5R3I4 469 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 RBM23Q86U06 439 aaKnown RBP17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 GJD3Q8N144 294 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 MICAL1Q8TDZ2 1067 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 POLR3CQ9BUI4 534 aaPredicted RBP17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 MRPL9Q9BYD2 267 aaKnown RBP17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 EPHX3Q9H6B9 360 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 TLE6Q9H808 572 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 TUFT1Q9NNX1 390 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 SPG21Q9NZD8 308 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 PCDHB2Q9Y5E7 798 aa17.6■□□□□ 0.41
LDLRAD3-205ENST00000532490 C19orf67A6NJJ6 358 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 PER2O15055 1255 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 CD2BP2O95400 341 aaKnown RBP17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 EYA4O95677 639 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 GLRA2P23416 452 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 TOB1P50616 345 aaPredicted RBP17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 BCAR1P56945 870 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 CAPSQ13938 189 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 KCNC3Q14003 757 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 CLUL1Q15846 466 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 DUSP6Q16828 381 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 LONRF3Q496Y0 759 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 AGMOQ6ZNB7 445 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 VN1R2Q8NFZ6 395 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 TBC1D13Q9NVG8 400 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 PRKAG3Q9UGI9 489 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 CD207Q9UJ71 328 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 DBR1Q9UK59 544 aaKnown RBP17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 FAM50BQ9Y247 325 aa17.59■□□□□ 0.41
LDLRAD3-205ENST00000532490 TSPAN1O60635 241 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 RPA1P27694 616 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 NDUFV1P49821 464 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 RBM10P98175 930 aaKnown RBP17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 KRT17Q04695 432 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 ZP2Q05996 745 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 MBTD1Q05BQ5 628 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 COASYQ13057 564 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 SMAD4Q13485 552 aaKnown RBP17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 NBR1Q14596 966 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 PCBP1Q15365 356 aaKnown RBP eCLIP17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 AMHR2Q16671 573 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 NOMO2Q5JPE7 1267 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 GLB1LQ6UWU2 654 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 PGBD4Q96DM1 585 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 CDCA3Q99618 268 aaPredicted RBP17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 TCF25Q9BQ70 676 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 NFKBIZQ9BYH8 718 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 NRDE2Q9H7Z3 1164 aa17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 PUF60Q9UHX1 559 aaKnown RBP17.58■□□□□ 0.4
LDLRAD3-205ENST00000532490 HIDE1A8MVS5 230 aa17.57■□□□□ 0.4
LDLRAD3-205ENST00000532490 NT5C1B-RDH14C9J2C7 533 aa17.57■□□□□ 0.4
LDLRAD3-205ENST00000532490 PI4K2BG5E9Z4 385 aa17.57■□□□□ 0.4
LDLRAD3-205ENST00000532490 B4GALT3O60512 393 aa17.57■□□□□ 0.4
LDLRAD3-205ENST00000532490 ALDH7A1P49419 539 aaKnown RBP17.57■□□□□ 0.4
LDLRAD3-205ENST00000532490 FXR2P51116 673 aaKnown RBP eCLIP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms