RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 PDE8AO60658 829 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 GLRX3O76003 335 aaKnown RBP5.18□□□□□ -1.58
HDAC2-208ENST00000520746 SMAD3P84022 425 aaKnown RBP5.18□□□□□ -1.58
HDAC2-208ENST00000520746 TCIRG1Q13488 830 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 TMEM132BQ14DG7 1078 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 PCBP1Q15365 356 aaKnown RBP eCLIP5.18□□□□□ -1.58
HDAC2-208ENST00000520746 TMEM177Q53S58 311 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 RABL3Q5HYI8 236 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 LRCH2Q5VUJ6 765 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 C1QL3Q5VWW1 255 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 HTR3DQ70Z44 454 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 AHI1Q8N157 1196 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 ZNF276Q8N554 614 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 C2orf69Q8N8R5 385 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 ERCC4Q92889 916 aaPredicted RBP5.18□□□□□ -1.58
HDAC2-208ENST00000520746 GFM2Q969S9 779 aaKnown RBP5.18□□□□□ -1.58
HDAC2-208ENST00000520746 FOXRED1Q96CU9 486 aaPredicted RBP5.18□□□□□ -1.58
HDAC2-208ENST00000520746 TCF25Q9BQ70 676 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 IL23AQ9NPF7 189 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 SAE1Q9UBE0 346 aaPredicted RBP5.18□□□□□ -1.58
HDAC2-208ENST00000520746 DENND2AQ9ULE3 1009 aa5.18□□□□□ -1.58
HDAC2-208ENST00000520746 FAM83GA6ND36 823 aa5.17□□□□□ -1.58
HDAC2-208ENST00000520746 NR4A1P22736 598 aa5.17□□□□□ -1.58
HDAC2-208ENST00000520746 CANXP27824 592 aaKnown RBP5.17□□□□□ -1.58
HDAC2-208ENST00000520746 ANTXR2P58335 489 aa5.17□□□□□ -1.58
HDAC2-208ENST00000520746 FKBP15Q5T1M5 1219 aa5.17□□□□□ -1.58
HDAC2-208ENST00000520746 RNF187Q5TA31 235 aaPredicted RBP5.17□□□□□ -1.58
HDAC2-208ENST00000520746 PRIMA1Q86XR5 153 aa5.17□□□□□ -1.58
HDAC2-208ENST00000520746 PPM1KQ8N3J5 372 aa5.17□□□□□ -1.58
HDAC2-208ENST00000520746 OR5AN1Q8NGI8 311 aa5.17□□□□□ -1.58
HDAC2-208ENST00000520746 LEO1Q8WVC0 666 aaPredicted RBP5.17□□□□□ -1.58
HDAC2-208ENST00000520746 NKD2Q969F2 451 aaPredicted RBP5.17□□□□□ -1.58
HDAC2-208ENST00000520746 PGBD4Q96DM1 585 aa5.17□□□□□ -1.58
HDAC2-208ENST00000520746 ZNF764Q96H86 408 aaPredicted RBP5.17□□□□□ -1.58
HDAC2-208ENST00000520746 MNTQ99583 582 aa5.17□□□□□ -1.58
HDAC2-208ENST00000520746 FOXB1Q99853 325 aa5.17□□□□□ -1.58
HDAC2-208ENST00000520746 MTFR1LQ9H019 292 aa5.17□□□□□ -1.58
HDAC2-208ENST00000520746 CABP5Q9NP86 173 aa5.17□□□□□ -1.58
HDAC2-208ENST00000520746 PRKAB1Q9Y478 270 aa5.17□□□□□ -1.58
HDAC2-208ENST00000520746 NCAPD3P42695 1498 aa5.16□□□□□ -1.58
HDAC2-208ENST00000520746 SLC12A8A0AV02 714 aa5.16□□□□□ -1.58
HDAC2-208ENST00000520746 GRID2IPA4D2P6 1211 aa5.16□□□□□ -1.58
HDAC2-208ENST00000520746 GOLGA8BA8MQT2 603 aa5.16□□□□□ -1.58
HDAC2-208ENST00000520746 GSG1L2A8MUP6 293 aa5.16□□□□□ -1.58
HDAC2-208ENST00000520746 GRXCR1A8MXD5 290 aa5.16□□□□□ -1.58
HDAC2-208ENST00000520746 RHOBTB3O94955 611 aa5.16□□□□□ -1.58
HDAC2-208ENST00000520746 POU3F2P20265 443 aaPredicted RBP5.16□□□□□ -1.58
HDAC2-208ENST00000520746 MRPS21P82921 87 aaKnown RBP5.16□□□□□ -1.58
HDAC2-208ENST00000520746 GAGE13Q4V321 117 aa5.16□□□□□ -1.58
HDAC2-208ENST00000520746 THNSL2Q86YJ6 484 aa5.16□□□□□ -1.58
HDAC2-208ENST00000520746 ELOA2Q8IYF1 753 aaPredicted RBP5.16□□□□□ -1.58
HDAC2-208ENST00000520746 UBR7Q8N806 425 aa5.16□□□□□ -1.58
HDAC2-208ENST00000520746 NTN5Q8WTR8 489 aaPredicted RBP5.16□□□□□ -1.58
HDAC2-208ENST00000520746 ATXN2LQ8WWM7 1075 aaKnown RBP5.16□□□□□ -1.58
HDAC2-208ENST00000520746 SPC25Q9HBM1 224 aa5.16□□□□□ -1.58
HDAC2-208ENST00000520746 PACSIN3Q9UKS6 424 aa5.16□□□□□ -1.58
HDAC2-208ENST00000520746 NESP48681 1621 aa5.15□□□□□ -1.58
HDAC2-208ENST00000520746 CBX4O00257 560 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 DNAJC6O75061 913 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 HIP1RO75146 1068 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 KRT37O76014 449 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 CNGA1P29973 690 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 RGS3P49796 1198 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 ARHGAP44Q17R89 818 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 CLEC14AQ86T13 490 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 SYNE4Q8N205 404 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 NXPE1Q8N323 547 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 MB21D1Q8N884 522 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 CHST14Q8NCH0 376 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 PROKR1Q8TCW9 393 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 CHAC2Q8WUX2 184 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 CAAP1Q9H8G2 361 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 IFT57Q9NWB7 429 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 FZD1Q9UP38 647 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 MAPRE3Q9UPY8 281 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 ZKSCAN5Q9Y2L8 839 aa5.15□□□□□ -1.59
HDAC2-208ENST00000520746 PTPDC1A2A3K4 754 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 ANKRD62A6NC57 917 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 GOLGA6L6A8MZA4 724 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 PRLP01236 227 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 ITGB1P05556 798 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 SOX5P35711 763 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 MECP2P51608 486 aaKnown RBP5.14□□□□□ -1.59
HDAC2-208ENST00000520746 IRF9Q00978 393 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 SEPT7Q16181 437 aaKnown RBP5.14□□□□□ -1.59
HDAC2-208ENST00000520746 DGKDQ16760 1214 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 CT47A1Q5JQC4 288 aaPredicted RBP5.14□□□□□ -1.59
HDAC2-208ENST00000520746 LY6G5CQ5SRR4 150 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 LRRC55Q6ZSA7 311 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 DDX46Q7L014 1031 aaKnown RBP5.14□□□□□ -1.59
HDAC2-208ENST00000520746 RNF180Q86T96 592 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 MDGA1Q8NFP4 955 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 NAF1Q96HR8 494 aaKnown RBP5.14□□□□□ -1.59
HDAC2-208ENST00000520746 RIOX1Q9H6W3 641 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.14□□□□□ -1.59
HDAC2-208ENST00000520746 PTGFRNQ9P2B2 879 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 B4GALT6Q9UBX8 382 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 ZNHIT2Q9UHR6 403 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 RCAN3Q9UKA8 241 aa5.14□□□□□ -1.59
HDAC2-208ENST00000520746 HS3ST4Q9Y661 456 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms