RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 DSEQ9UL01 958 aa4.18□□□□□ -1.74
HMGB1P22-201ENST00000505315 GPR34Q9UPC5 381 aa4.18□□□□□ -1.74
HMGB1P22-201ENST00000505315 PCDHA13Q9Y5I0 950 aa4.18□□□□□ -1.74
HMGB1P22-201ENST00000505315 USP19O94966 1318 aa4.18□□□□□ -1.74
HMGB1P22-201ENST00000505315 A0A088AWK7 358 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 A0A1W2PPH5 198 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 GOLGA6L3A6NEY3 463 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 SMTNL1A8MU46 457 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 TISP43B9A030 160 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 B9A039 149 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 NKRFO15226 690 aaKnown RBP eCLIP4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 NPHS1O60500 1241 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 DGKIO75912 1065 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 STARD3NLO95772 234 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 DDX58O95786 925 aaKnown RBP4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 ATICP31939 592 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 CTNNA1P35221 906 aaKnown RBP4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 AFMP43652 599 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 TUBP50607 506 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 DRG2P55039 364 aaKnown RBP4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 PLIN5Q00G26 463 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 FMO1Q01740 532 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 GALNT1Q10472 559 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 MAPK7Q13164 816 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 TUSC3Q13454 348 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 PLS1Q14651 629 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 EPHA7Q15375 998 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 DLGAP5Q15398 846 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 NR0B2Q15466 257 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 SMAD1Q15797 465 aaKnown RBP4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 PRAMEF9Q5VWM5 478 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 MBLAC2Q68D91 279 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 SV2AQ7L0J3 742 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 TMC6Q7Z403 805 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 LRRTM4Q86VH4 590 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 TMTC1Q8IUR5 882 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 NOSTRINQ8IVI9 506 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 HSCBQ8IWL3 235 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 FTSJ3Q8IY81 847 aaKnown RBP4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 NLGN4XQ8N0W4 816 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 TOP6BLQ8N6T0 577 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 USHBP1Q8N6Y0 703 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 GOLGA6L1Q8N7Z2 621 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 LSMEM1Q8N8F7 131 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 HIPK4Q8NE63 616 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 PIP4K2CQ8TBX8 421 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 DCAF11Q8TEB1 546 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 CENPIQ92674 756 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 IQCDQ96DY2 449 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 SLC35A4Q96G79 324 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 VMP1Q96GC9 406 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 TCTN2Q96GX1 697 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 MYL10Q9BUA6 226 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 KATNAL1Q9BW62 490 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 STK31Q9BXU1 1019 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 TMPRSS13Q9BYE2 586 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 RETREG1Q9H6L5 497 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 CNTD2Q9H8S5 307 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 JMJD4Q9H9V9 463 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 ZCCHC17Q9NP64 241 aaKnown RBP4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 SARS2Q9NP81 518 aaKnown RBP4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 HAUS2Q9NVX0 235 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 MARCH2Q9P0N8 246 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 CPNE7Q9UBL6 633 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 USP18Q9UMW8 372 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 STARD13Q9Y3M8 1113 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 PCDHA3Q9Y5H8 950 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 ACTL7BQ9Y614 415 aa4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 COL17A1Q9UMD9 1497 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P22-201ENST00000505315 SHISA3A0PJX4 238 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 HMX3A6NHT5 357 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 LRRC14BA6NHZ5 514 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 AQP12BA6NM10 295 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 F8W8V4 182 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 RBAK-RBAKDNI3L0D1 243 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 RNF225M0QZC1 329 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 IPO5O00410 1097 aaKnown RBP4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 KRIT1O00522 736 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 PODXLO00592 558 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 AXIN1O15169 862 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 FOXP2O15409 715 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 P4HA2O15460 535 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 SART1O43290 800 aaKnown RBP4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 AHCYL1O43865 530 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 GAS2O43903 313 aaKnown RBP4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 PLA2G6O60733 806 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 APOA4P06727 396 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 AKR1B1P15121 316 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 XPAP23025 273 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 EDNRBP24530 442 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 FPR2P25090 351 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 GALNSP34059 522 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 BMP8BP34820 402 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 PAPOLAP51003 745 aaKnown RBP4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 PCBP3P57721 371 aaKnown RBP4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 RNASE9P60153 205 aaKnown RBP4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 PRR20EP86478 221 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 PRR20CP86479 221 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 PRR20DP86480 221 aa4.16□□□□□ -1.74
HMGB1P22-201ENST00000505315 PRR20BP86481 221 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms