RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 FBXL18Q96ME1 805 aa9.61□□□□□ -0.87
PRKCB-208ENST00000487674 MRPL9Q9BYD2 267 aaKnown RBP9.61□□□□□ -0.87
PRKCB-208ENST00000487674 SPG21Q9NZD8 308 aa9.61□□□□□ -0.87
PRKCB-208ENST00000487674 SEPT9Q9UHD8 586 aaPredicted RBP9.61□□□□□ -0.87
PRKCB-208ENST00000487674 KMT2EQ8IZD2 1858 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 CYP3A7-CYP3A51PA0A087WV96 503 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 CPLX1O14810 134 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 DEXIO95424 95 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 TDP2O95551 362 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 EOMESO95936 686 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 HOXB8P17481 243 aaPredicted RBP9.6□□□□□ -0.87
PRKCB-208ENST00000487674 SFPQP23246 707 aaKnown RBP eCLIP9.6□□□□□ -0.87
PRKCB-208ENST00000487674 CYP3A7P24462 503 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 PBX3P40426 434 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 DNM2P50570 870 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 NHLH1Q02575 133 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 SSRP1Q08945 709 aaKnown RBP9.6□□□□□ -0.87
PRKCB-208ENST00000487674 GALNT17Q6IS24 598 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 ANKRD54Q6NXT1 300 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 B3GNT9Q6UX72 402 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 TRIM67Q6ZTA4 783 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 BMP8AQ7Z5Y6 402 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 ZNF410Q86VK4 478 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 BLIDQ8IZY5 108 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 SLC39A11Q8N1S5 342 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 ETNPPLQ8TBG4 499 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 GJA10Q969M2 543 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 ZNF668Q96K58 619 aaPredicted RBP9.6□□□□□ -0.87
PRKCB-208ENST00000487674 RPGRIP1Q96KN7 1286 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 MBOAT7Q96N66 472 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 TRAIPQ9BWF2 469 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 NIFKQ9BYG3 293 aaKnown RBP9.6□□□□□ -0.87
PRKCB-208ENST00000487674 GCOM2Q9BZD3 368 aaPredicted RBP9.6□□□□□ -0.87
PRKCB-208ENST00000487674 S1PR5Q9H228 398 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 CHST12Q9NRB3 414 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 ZDBF2Q9HCK1 2354 aa9.6□□□□□ -0.87
PRKCB-208ENST00000487674 IGKV6-21A0A0C4DH24 114 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 CARNS1A5YM72 827 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 TMEM221A6NGB7 291 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 HIDE1A8MVS5 230 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 M0R296 226 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 M0R2N6 131 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 STBD1O95210 358 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 FGFR4P22455 802 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 TECP42680 631 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 ZXDAP98168 799 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 DRP2Q13474 957 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 SMC1AQ14683 1233 aaKnown RBP9.59□□□□□ -0.87
PRKCB-208ENST00000487674 NONOQ15233 471 aaKnown RBP eCLIP9.59□□□□□ -0.87
PRKCB-208ENST00000487674 NPY5RQ15761 445 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 MTERF2Q49AM1 385 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 LLGL2Q6P1M3 1020 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 SYCE2Q6PIF2 218 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 CPLX2Q6PUV4 134 aaKnown RBP9.59□□□□□ -0.87
PRKCB-208ENST00000487674 TMC7Q7Z402 723 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 ALYREFQ86V81 257 aaKnown RBP9.59□□□□□ -0.87
PRKCB-208ENST00000487674 HELQQ8TDG4 1101 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 CASP10Q92851 521 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 ZNF274Q96GC6 653 aaPredicted RBP9.59□□□□□ -0.87
PRKCB-208ENST00000487674 CEP89Q96ST8 783 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 DDX25Q9UHL0 483 aaKnown RBP9.59□□□□□ -0.87
PRKCB-208ENST00000487674 PCDHGA10Q9Y5H3 936 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 CYP46A1Q9Y6A2 500 aa9.59□□□□□ -0.87
PRKCB-208ENST00000487674 A0A087WZ62 844 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 TMEM150BA6NC51 233 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 C2orf71A6NGG8 1288 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 MAFO75444 373 aaPredicted RBP9.58□□□□□ -0.88
PRKCB-208ENST00000487674 CSDE1O75534 798 aaKnown RBP9.58□□□□□ -0.88
PRKCB-208ENST00000487674 SKIP12755 728 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 PHKA2P46019 1235 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 ALDH7A1P49419 539 aaKnown RBP9.58□□□□□ -0.88
PRKCB-208ENST00000487674 MRE11P49959 708 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 RAB27AP51159 221 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 BCAR1P56945 870 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 PSMC5P62195 406 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 SIGLEC14Q08ET2 396 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 PPP2R5CQ13362 524 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 BMS1Q14692 1282 aaKnown RBP9.58□□□□□ -0.88
PRKCB-208ENST00000487674 PTPN21Q16825 1174 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 PROX2Q3B8N5 592 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 TPRNQ4KMQ1 711 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 TWF2Q6IBS0 349 aaKnown RBP9.58□□□□□ -0.88
PRKCB-208ENST00000487674 KRT25Q7Z3Z0 450 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 SUGP1Q8IWZ8 645 aaKnown RBP9.58□□□□□ -0.88
PRKCB-208ENST00000487674 MRPL43Q8N983 215 aaKnown RBP9.58□□□□□ -0.88
PRKCB-208ENST00000487674 PBXIP1Q96AQ6 731 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 TMEM169Q96HH4 297 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 JPH2Q9BR39 696 aaPredicted RBP9.58□□□□□ -0.88
PRKCB-208ENST00000487674 FDXACB1Q9BRP7 624 aaPredicted RBP9.58□□□□□ -0.88
PRKCB-208ENST00000487674 TM6SF1Q9BZW5 370 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 INO80BQ9C086 356 aaPredicted RBP9.58□□□□□ -0.88
PRKCB-208ENST00000487674 SUCLA2Q9P2R7 463 aaPredicted RBP9.58□□□□□ -0.88
PRKCB-208ENST00000487674 PIN4Q9Y237 131 aaKnown RBP9.58□□□□□ -0.88
PRKCB-208ENST00000487674 HCFC2Q9Y5Z7 792 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 ARID2Q68CP9 1835 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 TRIOO75962 3097 aa9.58□□□□□ -0.88
PRKCB-208ENST00000487674 DDX11L8A8MPP1 907 aa9.57□□□□□ -0.88
PRKCB-208ENST00000487674 SLC37A4O43826 429 aa9.57□□□□□ -0.88
PRKCB-208ENST00000487674 DKC1O60832 514 aaKnown RBP eCLIP9.57□□□□□ -0.88
PRKCB-208ENST00000487674 ZC3H11AO75152 810 aaKnown RBP eCLIP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms