RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 CUL5Q93034 780 aa17.34■□□□□ 0.37
U2AF1-211ENST00000486519 SOBPA7XYQ1 873 aa17.33■□□□□ 0.36
U2AF1-211ENST00000486519 NTHL1P78549 312 aa17.33■□□□□ 0.36
U2AF1-211ENST00000486519 UNQ6494/PRO21346Q6UXR6 183 aa17.33■□□□□ 0.36
U2AF1-211ENST00000486519 ABHD15Q6UXT9 468 aa17.33■□□□□ 0.36
U2AF1-211ENST00000486519 LRRC71Q8N4P6 559 aa17.33■□□□□ 0.36
U2AF1-211ENST00000486519 LINC01465Q8N7H1 131 aa17.33■□□□□ 0.36
U2AF1-211ENST00000486519 TNPO1Q92973 898 aaKnown RBP17.33■□□□□ 0.36
U2AF1-211ENST00000486519 TMEM121BQ9BXQ6 578 aaPredicted RBP17.33■□□□□ 0.36
U2AF1-211ENST00000486519 RHOBTB2Q9BYZ6 727 aa17.33■□□□□ 0.36
U2AF1-211ENST00000486519 OSBPL6Q9BZF3 934 aa17.33■□□□□ 0.36
U2AF1-211ENST00000486519 NBEAQ8NFP9 2946 aa17.32■□□□□ 0.36
U2AF1-211ENST00000486519 NFASCO94856 1347 aa17.32■□□□□ 0.36
U2AF1-211ENST00000486519 PAPLNO95428 1278 aa17.32■□□□□ 0.36
U2AF1-211ENST00000486519 RETP07949 1114 aa17.32■□□□□ 0.36
U2AF1-211ENST00000486519 SPINK2P20155 84 aa17.32■□□□□ 0.36
U2AF1-211ENST00000486519 EIF4BP23588 611 aaKnown RBP17.32■□□□□ 0.36
U2AF1-211ENST00000486519 AK2P54819 239 aa17.32■□□□□ 0.36
U2AF1-211ENST00000486519 TROAPQ12815 778 aa17.32■□□□□ 0.36
U2AF1-211ENST00000486519 TRAF1Q13077 416 aa17.32■□□□□ 0.36
U2AF1-211ENST00000486519 CSRP2Q16527 193 aa17.32■□□□□ 0.36
U2AF1-211ENST00000486519 ZNF484Q5JVG2 852 aa17.32■□□□□ 0.36
U2AF1-211ENST00000486519 PGBD1Q96JS3 809 aa17.32■□□□□ 0.36
U2AF1-211ENST00000486519 MYL10Q9BUA6 226 aa17.32■□□□□ 0.36
U2AF1-211ENST00000486519 NT5C3AQ9H0P0 336 aa17.32■□□□□ 0.36
U2AF1-211ENST00000486519 FAM217BQ9NTX9 383 aaPredicted RBP17.32■□□□□ 0.36
U2AF1-211ENST00000486519 COL4A2P08572 1712 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 BACH1O14867 736 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 OFD1O75665 1012 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 HOXC13P31276 330 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 PRKCQQ04759 706 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 RING1Q06587 406 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 NOMO2Q5JPE7 1267 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 ZBTB41Q5SVQ8 909 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 TPRG1Q6ZUI0 275 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 KXD1Q9BQD3 176 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 MXRA8Q9BRK3 442 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 SDF4Q9BRK5 362 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 PIDD1Q9HB75 910 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 AGO4Q9HCK5 861 aaKnown RBP17.31■□□□□ 0.36
U2AF1-211ENST00000486519 MRPL17Q9NRX2 175 aaKnown RBP17.31■□□□□ 0.36
U2AF1-211ENST00000486519 MARCH5Q9NX47 278 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.31■□□□□ 0.36
U2AF1-211ENST00000486519 PCDHA6Q9UN73 950 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 AKT3Q9Y243 479 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 PCDHA8Q9Y5H6 950 aa17.31■□□□□ 0.36
U2AF1-211ENST00000486519 AKAP13Q12802 2813 aa17.3■□□□□ 0.36
U2AF1-211ENST00000486519 GCN1Q92616 2671 aaKnown RBP17.3■□□□□ 0.36
U2AF1-211ENST00000486519 F8W810 466 aa17.3■□□□□ 0.36
U2AF1-211ENST00000486519 HRO43593 1189 aa17.3■□□□□ 0.36
U2AF1-211ENST00000486519 TOP3BO95985 862 aaKnown RBP17.3■□□□□ 0.36
U2AF1-211ENST00000486519 GLUD1P00367 558 aa17.3■□□□□ 0.36
U2AF1-211ENST00000486519 DARSP14868 501 aaKnown RBP17.3■□□□□ 0.36
U2AF1-211ENST00000486519 PHKA2P46019 1235 aa17.3■□□□□ 0.36
U2AF1-211ENST00000486519 SF3A2Q15428 464 aaKnown RBP17.3■□□□□ 0.36
U2AF1-211ENST00000486519 CCDC6Q16204 474 aa17.3■□□□□ 0.36
U2AF1-211ENST00000486519 PDXDC2PQ6P474 469 aa17.3■□□□□ 0.36
U2AF1-211ENST00000486519 LRSAM1Q6UWE0 723 aa17.3■□□□□ 0.36
U2AF1-211ENST00000486519 PALB2Q86YC2 1186 aa17.3■□□□□ 0.36
U2AF1-211ENST00000486519 ZNF687Q8N1G0 1237 aa17.3■□□□□ 0.36
U2AF1-211ENST00000486519 KDF1Q8NAX2 398 aaPredicted RBP17.3■□□□□ 0.36
U2AF1-211ENST00000486519 RPS6KC1Q96S38 1066 aa17.3■□□□□ 0.36
U2AF1-211ENST00000486519 RAB23Q9ULC3 237 aa17.3■□□□□ 0.36
U2AF1-211ENST00000486519 SRRM3A6NNA2 597 aaPredicted RBP17.29■□□□□ 0.36
U2AF1-211ENST00000486519 LRP3O75074 770 aa17.29■□□□□ 0.36
U2AF1-211ENST00000486519 SLC26A2P50443 739 aa17.29■□□□□ 0.36
U2AF1-211ENST00000486519 PDE1AP54750 535 aa17.29■□□□□ 0.36
U2AF1-211ENST00000486519 HNRNPUQ00839 825 aaKnown RBP eCLIP17.29■□□□□ 0.36
U2AF1-211ENST00000486519 RNASELQ05823 741 aaKnown RBP17.29■□□□□ 0.36
U2AF1-211ENST00000486519 SWSAP1Q6NVH7 229 aa17.29■□□□□ 0.36
U2AF1-211ENST00000486519 CYP26C1Q6V0L0 522 aa17.29■□□□□ 0.36
U2AF1-211ENST00000486519 GLYCTKQ8IVS8 523 aa17.29■□□□□ 0.36
U2AF1-211ENST00000486519 B3GALT6Q96L58 329 aa17.29■□□□□ 0.36
U2AF1-211ENST00000486519 KRT23Q9C075 422 aa17.29■□□□□ 0.36
U2AF1-211ENST00000486519 ZNF302Q9NR11 478 aa17.29■□□□□ 0.36
U2AF1-211ENST00000486519 PCDHB15Q9Y5E8 787 aa17.29■□□□□ 0.36
U2AF1-211ENST00000486519 SDK1Q7Z5N4 2213 aa17.29■□□□□ 0.36
U2AF1-211ENST00000486519 hCG_1642624A0A1W2PR95 340 aa17.28■□□□□ 0.36
U2AF1-211ENST00000486519 MAFGO15525 162 aa17.28■□□□□ 0.36
U2AF1-211ENST00000486519 FSHRP23945 695 aa17.28■□□□□ 0.36
U2AF1-211ENST00000486519 MAGEA9P43362 315 aa17.28■□□□□ 0.36
U2AF1-211ENST00000486519 RPS9P46781 194 aaKnown RBP17.28■□□□□ 0.36
U2AF1-211ENST00000486519 GPC3P51654 580 aa17.28■□□□□ 0.36
U2AF1-211ENST00000486519 DRP2Q13474 957 aa17.28■□□□□ 0.36
U2AF1-211ENST00000486519 IL31Q6EBC2 164 aa17.28■□□□□ 0.36
U2AF1-211ENST00000486519 EFCAB12Q6NXP0 572 aa17.28■□□□□ 0.36
U2AF1-211ENST00000486519 POTEHQ6S545 545 aa17.28■□□□□ 0.36
U2AF1-211ENST00000486519 GRASPQ7Z6J2 395 aaPredicted RBP17.28■□□□□ 0.36
U2AF1-211ENST00000486519 CELF5Q8N6W0 485 aaKnown RBP17.28■□□□□ 0.36
U2AF1-211ENST00000486519 HERC2P3Q9BVR0 1158 aa17.28■□□□□ 0.36
U2AF1-211ENST00000486519 CHMP4BQ9H444 224 aaKnown RBP17.28■□□□□ 0.36
U2AF1-211ENST00000486519 PSTPIP2Q9H939 334 aa17.28■□□□□ 0.36
U2AF1-211ENST00000486519 LHX6Q9UPM6 363 aa17.28■□□□□ 0.36
U2AF1-211ENST00000486519 LOC400499M0QZD8 3231 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 CCER2I3L3R5 266 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 NRP1O14786 923 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 TGM5O43548 720 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 EFEMP2O95967 443 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 SOD2P04179 222 aa17.27■□□□□ 0.36
U2AF1-211ENST00000486519 URODP06132 367 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms