RNA–Protein interactions for RNA: ENST00000486360.1

PPFIA4-205, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 4,547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-205ENST00000486360 DIS3Q9Y2L1 958 aaKnown RBP16.68■□□□□ 0.26
PPFIA4-205ENST00000486360 EIF3DO15371 548 aaKnown RBP eCLIP16.68■□□□□ 0.26
PPFIA4-205ENST00000486360 GPC3P51654 580 aa16.68■□□□□ 0.26
PPFIA4-205ENST00000486360 ARHGEF6Q15052 776 aa16.68■□□□□ 0.26
PPFIA4-205ENST00000486360 ABI1Q8IZP0 508 aa16.68■□□□□ 0.26
PPFIA4-205ENST00000486360 LRRC4Q9HBW1 653 aa16.68■□□□□ 0.26
PPFIA4-205ENST00000486360 DYNLT1P63172 113 aa16.68■□□□□ 0.26
PPFIA4-205ENST00000486360 SLC18A3Q16572 532 aa16.68■□□□□ 0.26
PPFIA4-205ENST00000486360 CCDC13Q8IYE1 715 aa16.68■□□□□ 0.26
PPFIA4-205ENST00000486360 TMEM143Q96AN5 459 aa16.68■□□□□ 0.26
PPFIA4-205ENST00000486360 ERGIC2Q96RQ1 377 aa16.68■□□□□ 0.26
PPFIA4-205ENST00000486360 SYNGAP1Q96PV0 1343 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 ATP1A1P05023 1023 aaKnown RBP16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 MYL3P08590 195 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 ACTN1P12814 892 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 INPP5BP32019 993 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 MMP14P50281 582 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 SF3A3Q12874 501 aaKnown RBP eCLIP16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 CHST13Q8NET6 341 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 FAN1Q9Y2M0 1017 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 HGSO14964 777 aaPredicted RBP16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 RNF40O75150 1001 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 NPEPPSP55786 919 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 PRKCEQ02156 737 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 MAPK8IP2Q13387 824 aaPredicted RBP16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 SPDYE2Q495Y8 402 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 BCAS4Q8TDM0 211 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 FMO2Q99518 471 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 NFU1Q9UMS0 254 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 ATRNO75882 1429 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 ABL1P00519 1130 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 METTL23Q86XA0 190 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 OR6B3Q8NGW1 331 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 MKNK1Q9BUB5 465 aa16.67■□□□□ 0.26
PPFIA4-205ENST00000486360 MCF2LO15068 1137 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 KIAA0391O15091 583 aaKnown RBP16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 FKBP1AP62942 108 aaKnown RBP16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 RFFLQ8WZ73 363 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 STK33Q9BYT3 514 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 APEX2Q9UBZ4 518 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 ANAPC5Q9UJX4 755 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 PFASO15067 1338 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 GNAT1P11488 350 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 SLC9A1P19634 815 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 BACE1P56817 501 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 ZFPM1Q8IX07 1006 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 ANKRD13AQ8IZ07 590 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 ANKEF1Q9NU02 776 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 UBE4BO95155 1302 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 PRPSAP2O60256 369 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 ZRANB2O95218 330 aaKnown RBP eCLIP16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 CUL1Q13616 776 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 NCAPHQ15003 741 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 DUOXA2Q1HG44 320 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 ZNF564Q8TBZ8 553 aaPredicted RBP16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 CALR3Q96L12 384 aaKnown RBP16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 CRY2Q49AN0 593 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 LMBRD2Q68DH5 695 aaPredicted RBP16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 TTI2Q6NXR4 508 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 UNC45AQ9H3U1 944 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 SLC38A10Q9HBR0 1119 aa16.66■□□□□ 0.26
PPFIA4-205ENST00000486360 SLC25A27O95847 323 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 SNAPC2Q13487 334 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 SNRNP35Q16560 246 aaKnown RBP16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 VSIG1Q86XK7 387 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 CERS5Q8N5B7 392 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 KCTD6Q8NC69 237 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 GPRASP2Q96D09 838 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 SEPT10Q9P0V9 454 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 PPP1R9AQ9ULJ8 1098 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 CHD2O14647 1828 aaKnown RBP16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 AP5Z1O43299 807 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 PSMA2P25787 234 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 GNA15P30679 374 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 NBPF12Q5TAG4 269 aaPredicted RBP16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 ARMCX2Q7L311 632 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 RSRC2Q7L4I2 434 aaKnown RBP16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 CCDC110Q8TBZ0 833 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 ATP2A3Q93084 1043 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 FHOD1Q9Y613 1164 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 A0A1W2PQJ5 194 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 ARP10275 920 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 ARHGAP25P42331 645 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 KLK7P49862 253 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 CYP4F22Q6NT55 531 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 CC2D1AQ6P1N0 951 aaPredicted RBP16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 RDM1Q8NG50 284 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 AGPAT1Q99943 283 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 RUSC1Q9BVN2 902 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 NUP85Q9BW27 656 aa16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 NGRNQ9NPE2 291 aaKnown RBP16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 PACSIN2Q9UNF0 486 aaPredicted RBP16.65■□□□□ 0.26
PPFIA4-205ENST00000486360 PRKCBP05771 671 aa16.64■□□□□ 0.25
PPFIA4-205ENST00000486360 CALB1P05937 261 aa16.64■□□□□ 0.25
PPFIA4-205ENST00000486360 EMC2Q15006 297 aa16.64■□□□□ 0.25
PPFIA4-205ENST00000486360 KSR1Q8IVT5 923 aa16.64■□□□□ 0.25
PPFIA4-205ENST00000486360 ANXA13P27216 316 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms