RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 GCOM2Q9BZD3 368 aaPredicted RBP16.53■□□□□ 0.24
CDC42SE1-203ENST00000470278 LRRC27Q9C0I9 530 aa16.53■□□□□ 0.24
CDC42SE1-203ENST00000470278 GOLPH3LQ9H4A5 285 aa16.53■□□□□ 0.24
CDC42SE1-203ENST00000470278 CDHR5Q9HBB8 845 aa16.53■□□□□ 0.24
CDC42SE1-203ENST00000470278 GINS2Q9Y248 185 aa16.53■□□□□ 0.24
CDC42SE1-203ENST00000470278 MICAL3Q7RTP6 2002 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 ACTN4O43707 911 aaKnown RBP16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 BAIAP3O94812 1187 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 SLFN14P0C7P3 912 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 SYKP43405 635 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 PHKA2P46019 1235 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 PTENP60484 403 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 PAK2Q13177 524 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 SRGAP1Q7Z6B7 1085 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 DEFB128Q7Z7B8 93 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 FAM228AQ86W67 206 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 BSNDQ8WZ55 320 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 SEPT8Q92599 483 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 KCNN1Q92952 543 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 GBP4Q96PP9 640 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 PPP1R16BQ96T49 567 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 OSBPL7Q9BZF2 842 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 INO80BQ9C086 356 aaPredicted RBP16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 PRDM12Q9H4Q4 367 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 AGO3Q9H9G7 860 aaKnown RBP16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 KCNG1Q9UIX4 513 aa16.52■□□□□ 0.24
CDC42SE1-203ENST00000470278 MYMKA6NI61 221 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 GPR182O15218 404 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 EFCAB14O75071 495 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 RPS6KA5O75582 802 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 PLS3P13797 630 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 SFPQP23246 707 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 AMPD3Q01432 767 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 DMP1Q13316 513 aaPredicted RBP16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 GIT2Q14161 759 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 DHX8Q14562 1220 aaKnown RBP16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 CEP57L1Q8IYX8 460 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 DBF4BQ8NFT6 615 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 SPIRE2Q8WWL2 714 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 DDX12PQ92771 950 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 IFT74Q96LB3 600 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 NTPCRQ9BSD7 190 aaKnown RBP16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 FTHL17Q9BXU8 183 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 C2orf40Q9H1Z8 148 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 PARVGQ9HBI0 331 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 ERVK-5Q9HDB9 667 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 LARSQ9P2J5 1176 aaKnown RBP16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 PADI3Q9ULW8 664 aa16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 NOC2LQ9Y3T9 749 aaKnown RBP16.51■□□□□ 0.23
CDC42SE1-203ENST00000470278 PHLPP2Q6ZVD8 1323 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 ABHD14A-ACY1A0A1B0GW23 586 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 FRMD3A2A2Y4 597 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 TBCAO75347 108 aaKnown RBP16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 KRT18P05783 430 aaKnown RBP16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 MYL1P05976 194 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 SRGAP2CP0DJJ0 459 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 ACTN1P12814 892 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 SCP2P22307 547 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 CD52P31358 61 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 UBE2HP62256 183 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 FAM160A1Q05DH4 1040 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 RAD51AP2Q09MP3 1159 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 FMR1NBQ8N0W7 255 aaPredicted RBP16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 ENGASEQ8NFI3 743 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 DNAJC19Q96DA6 116 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 ZNF668Q96K58 619 aaPredicted RBP16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 TRIM9Q9C026 710 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 ARHGAP28Q9P2N2 729 aa16.5■□□□□ 0.23
CDC42SE1-203ENST00000470278 ADGRA3Q8IWK6 1321 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 NPHP3-ACAD11A0A0J9YXS1 232 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 LRRIQ4A6NIV6 560 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 FGBP02675 491 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 MYOGP15173 224 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 NPTX2P47972 431 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 MBTD1Q05BQ5 628 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 SNW1Q13573 536 aaKnown RBP16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 LONRF3Q496Y0 759 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 ZBTB8OSQ8IWT0 167 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 PRIMPOLQ96LW4 560 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 C7orf25Q9BPX7 421 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 CCDC113Q9H0I3 377 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 MTIF3Q9H2K0 278 aaKnown RBP16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 NKX2-4Q9H2Z4 354 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 MINDY3Q9H8M7 445 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 SEL1LQ9UBV2 794 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 SERTAD1Q9UHV2 236 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 ST3GAL5Q9UNP4 418 aa16.49■□□□□ 0.23
CDC42SE1-203ENST00000470278 FAM13AO94988 1023 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 ARHGEF15O94989 841 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 ZNF202O95125 648 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 GAP43P17677 238 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 EFNA5P52803 228 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 RABGGTBP53611 331 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 NCKAP1LP55160 1127 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 PEX3P56589 373 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 IKBKEQ14164 716 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 FAM187BQ17R55 369 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 TCTN1Q2MV58 587 aa16.48■□□□□ 0.23
CDC42SE1-203ENST00000470278 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms