RNA–Protein interactions for RNA: ENST00000469522.1

SNU13-207, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 2

Gene SNU13, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-207ENST00000469522 TTC38Q5R3I4 469 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 PTCRAQ6ISU1 281 aaPredicted RBP13.05□□□□□ -0.32
SNU13-207ENST00000469522 KCNT2Q6UVM3 1135 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 AGMOQ6ZNB7 445 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 OTUD6AQ7L8S5 288 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 CATSPER4Q7RTX7 472 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 FAM178BQ8IXR5 827 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 FAM184AQ8NB25 1140 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 BCL7CQ8WUZ0 217 aaPredicted RBP13.05□□□□□ -0.32
SNU13-207ENST00000469522 TMX3Q96JJ7 454 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 MSLNLQ96KJ4 702 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 TBC1D32Q96NH3 1257 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 MTRQ99707 1265 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 GPRC5CQ9NQ84 441 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 FAM105AQ9NUU6 356 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 CLEC1BQ9P126 229 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 KIF3AQ9Y496 699 aa13.05□□□□□ -0.32
SNU13-207ENST00000469522 TSPAN1O60635 241 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 ZNF623O75123 536 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 OR52Z1P0C646 297 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 LAG3P18627 525 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 TECP42680 631 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 PTENP60484 403 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 PLCB3Q01970 1234 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 MBTD1Q05BQ5 628 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 ORC2Q13416 577 aaPredicted RBP13.04□□□□□ -0.32
SNU13-207ENST00000469522 CLUL1Q15846 466 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 TWF2Q6IBS0 349 aaKnown RBP13.04□□□□□ -0.32
SNU13-207ENST00000469522 POTEGQ6S5H5 508 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 SRGAP1Q7Z6B7 1085 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 IFNLR1Q8IU57 520 aaPredicted RBP13.04□□□□□ -0.32
SNU13-207ENST00000469522 SLC39A11Q8N1S5 342 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 LRRC43Q8N309 656 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 RNF149Q8NC42 400 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 SMG8Q8ND04 991 aaKnown RBP13.04□□□□□ -0.32
SNU13-207ENST00000469522 INO80BQ9C086 356 aaPredicted RBP13.04□□□□□ -0.32
SNU13-207ENST00000469522 IGFLR1Q9H665 355 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 DACT1Q9NYF0 836 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 PCDHB6Q9Y5E3 794 aa13.04□□□□□ -0.32
SNU13-207ENST00000469522 HIDE1A8MVS5 230 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 NT5C1B-RDH14C9J2C7 533 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 HOXA2O43364 376 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 GAS2O43903 313 aaKnown RBP13.03□□□□□ -0.32
SNU13-207ENST00000469522 OFD1O75665 1012 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 EDN1P05305 212 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 NRIP1P48552 1158 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 UBE3AQ05086 875 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 GNL2Q13823 731 aaKnown RBP13.03□□□□□ -0.32
SNU13-207ENST00000469522 KCNC3Q14003 757 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 SPOUT1Q5T280 376 aaKnown RBP13.03□□□□□ -0.32
SNU13-207ENST00000469522 MRPL10Q7Z7H8 261 aaKnown RBP13.03□□□□□ -0.32
SNU13-207ENST00000469522 RBM23Q86U06 439 aaKnown RBP13.03□□□□□ -0.32
SNU13-207ENST00000469522 THNSL1Q8IYQ7 743 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 EFHBQ8N7U6 833 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 BSNDQ8WZ55 320 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 MRPS27Q92552 414 aaKnown RBP13.03□□□□□ -0.32
SNU13-207ENST00000469522 POLR3CQ9BUI4 534 aaPredicted RBP13.03□□□□□ -0.32
SNU13-207ENST00000469522 VN1R3Q9BXE9 311 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 EIF2AQ9BY44 585 aaKnown RBP13.03□□□□□ -0.32
SNU13-207ENST00000469522 EPHX3Q9H6B9 360 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 TUFT1Q9NNX1 390 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 TLR9Q9NR96 1032 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 TBC1D13Q9NVG8 400 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 PCDHB2Q9Y5E7 798 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 PCDHB12Q9Y5F1 795 aa13.03□□□□□ -0.32
SNU13-207ENST00000469522 TDRD15B5MCY1 1934 aaKnown RBP13.02□□□□□ -0.32
SNU13-207ENST00000469522 TTLL13PA6NNM8 815 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 PER2O15055 1255 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 B4GALT5O43286 388 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 MBTPS2O43462 519 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 USO1O60763 962 aaKnown RBP13.02□□□□□ -0.33
SNU13-207ENST00000469522 DGAT1O75907 488 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 RPA1P27694 616 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 TRAPPC10P48553 1259 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 FXR2P51116 673 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNU13-207ENST00000469522 BCAR1P56945 870 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 EP400NLQ6ZTU2 488 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 ZNF280BQ86YH2 543 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 IGSF22Q8N9C0 903 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 TCP11Q8WWU5 503 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 CPB2Q96IY4 423 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 ZNF558Q96NG5 402 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 POLR3FQ9H1D9 316 aaPredicted RBP13.02□□□□□ -0.33
SNU13-207ENST00000469522 RNF39Q9H2S5 420 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 NRDE2Q9H7Z3 1164 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 C11orf16Q9NQ32 467 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 AAASQ9NRG9 546 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 DNAJB4Q9UDY4 337 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 DBR1Q9UK59 544 aaKnown RBP13.02□□□□□ -0.33
SNU13-207ENST00000469522 LZTS1Q9Y250 596 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 WDFY4Q6ZS81 3184 aa13.02□□□□□ -0.33
SNU13-207ENST00000469522 PP2D1A8MPX8 630 aa13.01□□□□□ -0.33
SNU13-207ENST00000469522 ASAP2O43150 1006 aa13.01□□□□□ -0.33
SNU13-207ENST00000469522 DDHD2O94830 711 aa13.01□□□□□ -0.33
SNU13-207ENST00000469522 XRCC6P12956 609 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNU13-207ENST00000469522 GJB2P29033 226 aa13.01□□□□□ -0.33
SNU13-207ENST00000469522 MCM2P49736 904 aa13.01□□□□□ -0.33
SNU13-207ENST00000469522 ZP2Q05996 745 aa13.01□□□□□ -0.33
SNU13-207ENST00000469522 POU5F1BQ06416 359 aa13.01□□□□□ -0.33
SNU13-207ENST00000469522 PTGDRQ13258 359 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms