RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 KDM3AQ9Y4C1 1321 aa21.27■□□□□ 0.99
USP11-205ENST00000467378 E9PMD0 336 aa21.26■□□□□ 0.99
USP11-205ENST00000467378 RPLP2P05387 115 aaKnown RBP21.26■□□□□ 0.99
USP11-205ENST00000467378 HYAL1Q12794 435 aa21.26■□□□□ 0.99
USP11-205ENST00000467378 SMAD4Q13485 552 aaKnown RBP21.26■□□□□ 0.99
USP11-205ENST00000467378 CTC1Q2NKJ3 1217 aa21.26■□□□□ 0.99
USP11-205ENST00000467378 AXDND1Q5T1B0 1012 aaPredicted RBP21.26■□□□□ 0.99
USP11-205ENST00000467378 KCNK18Q7Z418 384 aa21.26■□□□□ 0.99
USP11-205ENST00000467378 LRRC71Q8N4P6 559 aa21.26■□□□□ 0.99
USP11-205ENST00000467378 KCTD17Q8N5Z5 321 aa21.26■□□□□ 0.99
USP11-205ENST00000467378 METTL13Q8N6R0 699 aa21.26■□□□□ 0.99
USP11-205ENST00000467378 SEPT8Q92599 483 aa21.26■□□□□ 0.99
USP11-205ENST00000467378 NT5C3AQ9H0P0 336 aa21.26■□□□□ 0.99
USP11-205ENST00000467378 IGFLR1Q9H665 355 aa21.26■□□□□ 0.99
USP11-205ENST00000467378 CHMP5Q9NZZ3 219 aa21.26■□□□□ 0.99
USP11-205ENST00000467378 PCDHA7Q9UN72 937 aa21.26■□□□□ 0.99
USP11-205ENST00000467378 CUTAO60888 179 aa21.25■□□□□ 0.99
USP11-205ENST00000467378 NCLP19338 710 aaKnown RBP21.25■□□□□ 0.99
USP11-205ENST00000467378 RFC5P40937 340 aa21.25■□□□□ 0.99
USP11-205ENST00000467378 CLCN3P51790 818 aa21.25■□□□□ 0.99
USP11-205ENST00000467378 MGAT3Q09327 533 aa21.25■□□□□ 0.99
USP11-205ENST00000467378 TMEM119Q4V9L6 283 aa21.25■□□□□ 0.99
USP11-205ENST00000467378 RSPH3Q86UC2 560 aa21.25■□□□□ 0.99
USP11-205ENST00000467378 EXOC8Q8IYI6 725 aa21.25■□□□□ 0.99
USP11-205ENST00000467378 LEO1Q8WVC0 666 aaPredicted RBP21.25■□□□□ 0.99
USP11-205ENST00000467378 PLIN2Q99541 437 aa21.25■□□□□ 0.99
USP11-205ENST00000467378 IFIH1Q9BYX4 1025 aaKnown RBP21.25■□□□□ 0.99
USP11-205ENST00000467378 CD207Q9UJ71 328 aa21.25■□□□□ 0.99
USP11-205ENST00000467378 DNM3Q9UQ16 869 aa21.25■□□□□ 0.99
USP11-205ENST00000467378 CSPG5O95196 566 aa21.24■□□□□ 0.99
USP11-205ENST00000467378 EYA4O95677 639 aa21.24■□□□□ 0.99
USP11-205ENST00000467378 CHRNA1P02708 482 aa21.24■□□□□ 0.99
USP11-205ENST00000467378 TMOD1P28289 359 aa21.24■□□□□ 0.99
USP11-205ENST00000467378 FOXK2Q01167 660 aa21.24■□□□□ 0.99
USP11-205ENST00000467378 DRP2Q13474 957 aa21.24■□□□□ 0.99
USP11-205ENST00000467378 KARSQ15046 597 aaKnown RBP21.24■□□□□ 0.99
USP11-205ENST00000467378 ZRSR1Q15695 479 aaKnown RBP21.24■□□□□ 0.99
USP11-205ENST00000467378 FIBCD1Q8N539 461 aa21.24■□□□□ 0.99
USP11-205ENST00000467378 SLC7A3Q8WY07 619 aa21.24■□□□□ 0.99
USP11-205ENST00000467378 CALML4Q96GE6 196 aa21.24■□□□□ 0.99
USP11-205ENST00000467378 SPATA32Q96LK8 384 aa21.24■□□□□ 0.99
USP11-205ENST00000467378 JPH2Q9BR39 696 aaPredicted RBP21.24■□□□□ 0.99
USP11-205ENST00000467378 LMAN2LQ9H0V9 348 aa21.24■□□□□ 0.99
USP11-205ENST00000467378 XPNPEP1Q9NQW7 623 aa21.24■□□□□ 0.99
USP11-205ENST00000467378 USP34Q70CQ2 3546 aa21.23■□□□□ 0.99
USP11-205ENST00000467378 GRM6O15303 877 aa21.23■□□□□ 0.99
USP11-205ENST00000467378 TBX10O75333 385 aa21.23■□□□□ 0.99
USP11-205ENST00000467378 DGAT1O75907 488 aa21.23■□□□□ 0.99
USP11-205ENST00000467378 CTSHP09668 335 aa21.23■□□□□ 0.99
USP11-205ENST00000467378 GTF2F1P35269 517 aaKnown RBP eCLIP21.23■□□□□ 0.99
USP11-205ENST00000467378 POLGP54098 1239 aaPredicted RBP21.23■□□□□ 0.99
USP11-205ENST00000467378 MRPS6P82932 125 aaKnown RBP21.23■□□□□ 0.99
USP11-205ENST00000467378 TMEM62Q0P6H9 643 aa21.23■□□□□ 0.99
USP11-205ENST00000467378 SHC4Q6S5L8 630 aa21.23■□□□□ 0.99
USP11-205ENST00000467378 FBXL6Q8N531 539 aa21.23■□□□□ 0.99
USP11-205ENST00000467378 LRRC15Q8TF66 581 aa21.23■□□□□ 0.99
USP11-205ENST00000467378 CDK5RAP3Q96JB5 506 aa21.23■□□□□ 0.99
USP11-205ENST00000467378 OSBPL7Q9BZF2 842 aa21.23■□□□□ 0.99
USP11-205ENST00000467378 SCAND2PQ9GZW5 306 aaPredicted RBP21.23■□□□□ 0.99
USP11-205ENST00000467378 BHMT2Q9H2M3 363 aa21.23■□□□□ 0.99
USP11-205ENST00000467378 CDY2AQ9Y6F7 541 aa21.23■□□□□ 0.99
USP11-205ENST00000467378 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.22■□□□□ 0.99
USP11-205ENST00000467378 LINC01565O15544 149 aa21.22■□□□□ 0.99
USP11-205ENST00000467378 VTNP04004 478 aa21.22■□□□□ 0.99
USP11-205ENST00000467378 ME1P48163 572 aa21.22■□□□□ 0.99
USP11-205ENST00000467378 EMC2Q15006 297 aa21.22■□□□□ 0.99
USP11-205ENST00000467378 IER5Q5VY09 327 aa21.22■□□□□ 0.99
USP11-205ENST00000467378 PADI6Q6TGC4 694 aa21.22■□□□□ 0.99
USP11-205ENST00000467378 CCDC43Q96MW1 224 aaKnown RBP21.22■□□□□ 0.99
USP11-205ENST00000467378 MTRQ99707 1265 aa21.22■□□□□ 0.99
USP11-205ENST00000467378 C11orf84Q9BUA3 381 aaPredicted RBP21.22■□□□□ 0.99
USP11-205ENST00000467378 CELF4Q9BZC1 486 aaKnown RBP21.22■□□□□ 0.99
USP11-205ENST00000467378 BMP2KQ9NSY1 1161 aaPredicted RBP21.22■□□□□ 0.99
USP11-205ENST00000467378 ZFHX2Q9C0A1 2572 aaPredicted RBP21.22■□□□□ 0.99
USP11-205ENST00000467378 SPTBN4Q9H254 2564 aa21.22■□□□□ 0.99
USP11-205ENST00000467378 ARHGEF35A5YM69 484 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 GAS2O43903 313 aaKnown RBP21.21■□□□□ 0.99
USP11-205ENST00000467378 GPR32O75388 356 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 RB1P06400 928 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 PLCG1P19174 1290 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 DNM2P50570 870 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 ZXDAP98168 799 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 ATOH1Q92858 354 aaPredicted RBP21.21■□□□□ 0.99
USP11-205ENST00000467378 TMEM143Q96AN5 459 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 MAP7D2Q96T17 732 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 CDHR5Q9HBB8 845 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 ATP6V0A4Q9HBG4 840 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 BLOC1S4Q9NUP1 217 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 SUCLA2Q9P2R7 463 aaPredicted RBP21.21■□□□□ 0.99
USP11-205ENST00000467378 CCDC39Q9UFE4 941 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 AKT3Q9Y243 479 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 TRPV2Q9Y5S1 764 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 PLXNA3P51805 1871 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 MYH11P35749 1972 aa21.21■□□□□ 0.99
USP11-205ENST00000467378 USO1O60763 962 aaKnown RBP21.2■□□□□ 0.98
USP11-205ENST00000467378 BMPR1AP36894 532 aa21.2■□□□□ 0.98
USP11-205ENST00000467378 NDUFV1P49821 464 aa21.2■□□□□ 0.98
USP11-205ENST00000467378 ADALQ6DHV7 355 aa21.2■□□□□ 0.98
USP11-205ENST00000467378 SYT2Q8N9I0 419 aaPredicted RBP21.2■□□□□ 0.98
USP11-205ENST00000467378 TCP11Q8WWU5 503 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 214.7 ms