RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ADGRD2Q7Z7M1 963 aa21.07■□□□□ 0.96
COL5A1-203ENST00000460264 CATSPER3Q86XQ3 398 aa21.07■□□□□ 0.96
COL5A1-203ENST00000460264 PPP2R3CQ969Q6 453 aa21.07■□□□□ 0.96
COL5A1-203ENST00000460264 TBC1D32Q96NH3 1257 aa21.07■□□□□ 0.96
COL5A1-203ENST00000460264 PCDHGC5Q9Y5F6 944 aa21.07■□□□□ 0.96
COL5A1-203ENST00000460264 A0A087WWV3 80 aa21.06■□□□□ 0.96
COL5A1-203ENST00000460264 MED24O75448 989 aa21.06■□□□□ 0.96
COL5A1-203ENST00000460264 XRCC6P12956 609 aaKnown RBP eCLIP21.06■□□□□ 0.96
COL5A1-203ENST00000460264 RAB27AP51159 221 aa21.06■□□□□ 0.96
COL5A1-203ENST00000460264 PTCRAQ6ISU1 281 aaPredicted RBP21.06■□□□□ 0.96
COL5A1-203ENST00000460264 KCNT2Q6UVM3 1135 aa21.06■□□□□ 0.96
COL5A1-203ENST00000460264 ASAP3Q8TDY4 903 aa21.06■□□□□ 0.96
COL5A1-203ENST00000460264 LPPQ93052 612 aa21.06■□□□□ 0.96
COL5A1-203ENST00000460264 ZNF558Q96NG5 402 aa21.06■□□□□ 0.96
COL5A1-203ENST00000460264 POLR3CQ9BUI4 534 aaPredicted RBP21.06■□□□□ 0.96
COL5A1-203ENST00000460264 MRPL9Q9BYD2 267 aaKnown RBP21.06■□□□□ 0.96
COL5A1-203ENST00000460264 TLR9Q9NR96 1032 aa21.06■□□□□ 0.96
COL5A1-203ENST00000460264 KIF3AQ9Y496 699 aa21.06■□□□□ 0.96
COL5A1-203ENST00000460264 LINC01565O15544 149 aa21.05■□□□□ 0.96
COL5A1-203ENST00000460264 USO1O60763 962 aaKnown RBP21.05■□□□□ 0.96
COL5A1-203ENST00000460264 ZNF623O75123 536 aa21.05■□□□□ 0.96
COL5A1-203ENST00000460264 HOXA11P31270 313 aaPredicted RBP21.05■□□□□ 0.96
COL5A1-203ENST00000460264 PPM1AP35813 382 aa21.05■□□□□ 0.96
COL5A1-203ENST00000460264 PBX3P40426 434 aa21.05■□□□□ 0.96
COL5A1-203ENST00000460264 TOB1P50616 345 aaPredicted RBP21.05■□□□□ 0.96
COL5A1-203ENST00000460264 PUS10Q3MIT2 529 aaKnown RBP21.05■□□□□ 0.96
COL5A1-203ENST00000460264 POTEGQ6S5H5 508 aa21.05■□□□□ 0.96
COL5A1-203ENST00000460264 C4orf32Q8N8J7 132 aa21.05■□□□□ 0.96
COL5A1-203ENST00000460264 ERMNQ8TAM6 284 aa21.05■□□□□ 0.96
COL5A1-203ENST00000460264 RSPH1Q8WYR4 309 aa21.05■□□□□ 0.96
COL5A1-203ENST00000460264 IGFLR1Q9H665 355 aa21.05■□□□□ 0.96
COL5A1-203ENST00000460264 LZTS1Q9Y250 596 aa21.05■□□□□ 0.96
COL5A1-203ENST00000460264 GRXCR2A6NFK2 248 aa21.04■□□□□ 0.96
COL5A1-203ENST00000460264 MEIS3P2A8K0S8 358 aa21.04■□□□□ 0.96
COL5A1-203ENST00000460264 TBX10O75333 385 aa21.04■□□□□ 0.96
COL5A1-203ENST00000460264 IL9P15248 144 aa21.04■□□□□ 0.96
COL5A1-203ENST00000460264 RPA1P27694 616 aa21.04■□□□□ 0.96
COL5A1-203ENST00000460264 ARL2P36404 184 aa21.04■□□□□ 0.96
COL5A1-203ENST00000460264 PTENP60484 403 aa21.04■□□□□ 0.96
COL5A1-203ENST00000460264 PLCB3Q01970 1234 aa21.04■□□□□ 0.96
COL5A1-203ENST00000460264 DLX2Q07687 328 aaPredicted RBP21.04■□□□□ 0.96
COL5A1-203ENST00000460264 CAPSQ13938 189 aa21.04■□□□□ 0.96
COL5A1-203ENST00000460264 TFDP1Q14186 410 aa21.04■□□□□ 0.96
COL5A1-203ENST00000460264 LONRF3Q496Y0 759 aa21.04■□□□□ 0.96
COL5A1-203ENST00000460264 IFNLR1Q8IU57 520 aaPredicted RBP21.04■□□□□ 0.96
COL5A1-203ENST00000460264 MRPS27Q92552 414 aaKnown RBP21.04■□□□□ 0.96
COL5A1-203ENST00000460264 POLR3FQ9H1D9 316 aaPredicted RBP21.04■□□□□ 0.96
COL5A1-203ENST00000460264 DBR1Q9UK59 544 aaKnown RBP21.04■□□□□ 0.96
COL5A1-203ENST00000460264 PCDHB2Q9Y5E7 798 aa21.04■□□□□ 0.96
COL5A1-203ENST00000460264 ERLIN2O94905 339 aa21.03■□□□□ 0.96
COL5A1-203ENST00000460264 GLRA2P23416 452 aa21.03■□□□□ 0.96
COL5A1-203ENST00000460264 NRIP1P48552 1158 aa21.03■□□□□ 0.96
COL5A1-203ENST00000460264 MCM2P49736 904 aa21.03■□□□□ 0.96
COL5A1-203ENST00000460264 FXR2P51116 673 aaKnown RBP eCLIP21.03■□□□□ 0.96
COL5A1-203ENST00000460264 ERVFC1P60507 584 aa21.03■□□□□ 0.96
COL5A1-203ENST00000460264 POU5F1BQ06416 359 aa21.03■□□□□ 0.96
COL5A1-203ENST00000460264 ADAM15Q13444 863 aa21.03■□□□□ 0.96
COL5A1-203ENST00000460264 PCBP1Q15365 356 aaKnown RBP eCLIP21.03■□□□□ 0.96
COL5A1-203ENST00000460264 UBXN11Q5T124 520 aa21.03■□□□□ 0.96
COL5A1-203ENST00000460264 GLB1LQ6UWU2 654 aa21.03■□□□□ 0.96
COL5A1-203ENST00000460264 EFHBQ8N7U6 833 aa21.03■□□□□ 0.96
COL5A1-203ENST00000460264 NACC1Q96RE7 527 aa21.03■□□□□ 0.96
COL5A1-203ENST00000460264 SPG21Q9NZD8 308 aa21.03■□□□□ 0.96
COL5A1-203ENST00000460264 PCDHB6Q9Y5E3 794 aa21.03■□□□□ 0.96
COL5A1-203ENST00000460264 FSCN2O14926 492 aa21.02■□□□□ 0.96
COL5A1-203ENST00000460264 TSPAN1O60635 241 aa21.02■□□□□ 0.96
COL5A1-203ENST00000460264 MBTD1Q05BQ5 628 aa21.02■□□□□ 0.96
COL5A1-203ENST00000460264 PTGDRQ13258 359 aa21.02■□□□□ 0.96
COL5A1-203ENST00000460264 HAUS3Q68CZ6 603 aa21.02■□□□□ 0.96
COL5A1-203ENST00000460264 PDE12Q6L8Q7 609 aaKnown RBP21.02■□□□□ 0.96
COL5A1-203ENST00000460264 SLC39A11Q8N1S5 342 aa21.02■□□□□ 0.96
COL5A1-203ENST00000460264 MICAL1Q8TDZ2 1067 aa21.02■□□□□ 0.96
COL5A1-203ENST00000460264 PGBD4Q96DM1 585 aa21.02■□□□□ 0.96
COL5A1-203ENST00000460264 NFKBIZQ9BYH8 718 aa21.02■□□□□ 0.96
COL5A1-203ENST00000460264 GPRC5CQ9NQ84 441 aa21.02■□□□□ 0.96
COL5A1-203ENST00000460264 TBC1D13Q9NVG8 400 aa21.02■□□□□ 0.96
COL5A1-203ENST00000460264 INPP5FQ9Y2H2 1132 aa21.02■□□□□ 0.96
COL5A1-203ENST00000460264 INO80B-WBP1J3KQ70 363 aa21.01■□□□□ 0.95
COL5A1-203ENST00000460264 OFD1O75665 1012 aa21.01■□□□□ 0.95
COL5A1-203ENST00000460264 GJB2P29033 226 aa21.01■□□□□ 0.95
COL5A1-203ENST00000460264 BCAR1P56945 870 aa21.01■□□□□ 0.95
COL5A1-203ENST00000460264 CLUL1Q15846 466 aa21.01■□□□□ 0.95
COL5A1-203ENST00000460264 NOMO2Q5JPE7 1267 aa21.01■□□□□ 0.95
COL5A1-203ENST00000460264 MRPL10Q7Z7H8 261 aaKnown RBP21.01■□□□□ 0.95
COL5A1-203ENST00000460264 RBM23Q86U06 439 aaKnown RBP21.01■□□□□ 0.95
COL5A1-203ENST00000460264 FAM178BQ8IXR5 827 aa21.01■□□□□ 0.95
COL5A1-203ENST00000460264 MCPH1Q8NEM0 835 aa21.01■□□□□ 0.95
COL5A1-203ENST00000460264 TLE6Q9H808 572 aa21.01■□□□□ 0.95
COL5A1-203ENST00000460264 PUF60Q9UHX1 559 aaKnown RBP21.01■□□□□ 0.95
COL5A1-203ENST00000460264 ZC3H11AO75152 810 aaKnown RBP eCLIP21■□□□□ 0.95
COL5A1-203ENST00000460264 GLP2RO95838 553 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 MUTP22033 750 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 AXLP30530 894 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 NDUFV1P49821 464 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 KRT17Q04695 432 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 AMHR2Q16671 573 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 PLPP4Q5VZY2 271 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 MCTP1Q6DN14 999 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 NOTUMQ6P988 496 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 AGMOQ6ZNB7 445 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms