RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 DACT1Q9NYF0 836 aa20.12■□□□□ 0.81
SSR4P1-202ENST00000429427 LAD1O00515 517 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 TSPAN1O60635 241 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 CSPG5O95196 566 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 KCNQ1P51787 676 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 MXD4Q14582 209 aaPredicted RBP20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 COL19A1Q14993 1142 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 PTPROQ16827 1216 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 LONRF3Q496Y0 759 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 TJAP1Q5JTD0 557 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 HAUS3Q68CZ6 603 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 KCNK18Q7Z418 384 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 SNX29Q8TEQ0 813 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 FAM105AQ9NUU6 356 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 PCDHGC5Q9Y5F6 944 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 PLXNA4Q9HCM2 1894 aa20.11■□□□□ 0.81
SSR4P1-202ENST00000429427 EOMESO95936 686 aa20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 MUTP22033 750 aa20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 IRS1P35568 1242 aa20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 PBX3P40426 434 aa20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 MRPS5P82675 430 aaKnown RBP20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 POU5F1BQ06416 359 aa20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 TIGD5Q53EQ6 642 aa20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 PADI6Q6TGC4 694 aa20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 COLGALT1Q8NBJ5 622 aa20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 HLA-CQ95604 372 aa20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 CCDC43Q96MW1 224 aaKnown RBP20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 LMAN2LQ9H0V9 348 aa20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 POLD4Q9HCU8 107 aa20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 DDX19AQ9NUU7 478 aaKnown RBP20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 RNF216Q9NWF9 866 aaPredicted RBP20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 KIAA1024Q9UPX6 916 aa20.1■□□□□ 0.81
SSR4P1-202ENST00000429427 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 B4GALT5O43286 388 aa20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 B4GALT3O60512 393 aa20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 ZNF623O75123 536 aa20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 CYP11B2P19099 503 aa20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 AFF1P51825 1210 aaKnown RBP20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 NAALADL2Q58DX5 795 aa20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 DTHD1Q6ZMT9 781 aa20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 LRRC43Q8N309 656 aa20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 NFKBIZQ9BYH8 718 aa20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 BHMT2Q9H2M3 363 aa20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 NSUN3Q9H649 340 aaKnown RBP20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 COG5Q9UP83 839 aa20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 PCDHB2Q9Y5E7 798 aa20.09■□□□□ 0.81
SSR4P1-202ENST00000429427 ARHGEF35A5YM69 484 aa20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 E9PMD0 336 aa20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 K7ELQ4 463 aaPredicted RBP20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 HOXA2O43364 376 aa20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 BMP1P13497 986 aa20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 GTF2F1P35269 517 aaKnown RBP eCLIP20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 CDCA2Q69YH5 1023 aaPredicted RBP20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 AGMOQ6ZNB7 445 aa20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 MRPL10Q7Z7H8 261 aaKnown RBP20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 SMG8Q8ND04 991 aaKnown RBP20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 MCPH1Q8NEM0 835 aa20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 POF1BQ8WVV4 589 aa20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 CPB2Q96IY4 423 aa20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 PNMA5Q96PV4 448 aa20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 EIF2AQ9BY44 585 aaKnown RBP20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 UBE2ZQ9H832 354 aaPredicted RBP20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 FOXD4L1Q9NU39 408 aa20.08■□□□□ 0.81
SSR4P1-202ENST00000429427 NCOR1O75376 2440 aa20.07■□□□□ 0.8
SSR4P1-202ENST00000429427 VPS37CA5D8V6 355 aaPredicted RBP20.07■□□□□ 0.8
SSR4P1-202ENST00000429427 TTLL13PA6NNM8 815 aa20.07■□□□□ 0.8
SSR4P1-202ENST00000429427 INO80B-WBP1J3KQ70 363 aa20.07■□□□□ 0.8
SSR4P1-202ENST00000429427 FGF18O76093 207 aa20.07■□□□□ 0.8
SSR4P1-202ENST00000429427 EDN1P05305 212 aa20.07■□□□□ 0.8
SSR4P1-202ENST00000429427 SYT1P21579 422 aa20.07■□□□□ 0.8
SSR4P1-202ENST00000429427 GRIN1Q05586 938 aa20.07■□□□□ 0.8
SSR4P1-202ENST00000429427 HYAL1Q12794 435 aa20.07■□□□□ 0.8
SSR4P1-202ENST00000429427 TFDP1Q14186 410 aa20.07■□□□□ 0.8
SSR4P1-202ENST00000429427 ADGRD2Q7Z7M1 963 aa20.07■□□□□ 0.8
SSR4P1-202ENST00000429427 INTS4Q96HW7 963 aaKnown RBP20.07■□□□□ 0.8
SSR4P1-202ENST00000429427 VWA3AA6NCI4 1184 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 OFD1O75665 1012 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 ARF4P18085 180 aaPredicted RBP20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 LAG3P18627 525 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 RAB27AP51159 221 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 RESTQ13127 1097 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 HYIQ5T013 277 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 SPOUT1Q5T280 376 aaKnown RBP20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 KRT79Q5XKE5 535 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 KCNT2Q6UVM3 1135 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 BRAPQ7Z569 592 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 ABI1Q8IZP0 508 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 LRRC15Q8TF66 581 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 RAB34Q9BZG1 259 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 RNF39Q9H2S5 420 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 PCDHB12Q9Y5F1 795 aa20.06■□□□□ 0.8
SSR4P1-202ENST00000429427 LRRIQ4A6NIV6 560 aa20.05■□□□□ 0.8
SSR4P1-202ENST00000429427 ERLIN2O94905 339 aa20.05■□□□□ 0.8
SSR4P1-202ENST00000429427 EYA4O95677 639 aa20.05■□□□□ 0.8
SSR4P1-202ENST00000429427 LTBRP36941 435 aa20.05■□□□□ 0.8
SSR4P1-202ENST00000429427 ERVFC1P60507 584 aa20.05■□□□□ 0.8
SSR4P1-202ENST00000429427 PCBP1Q15365 356 aaKnown RBP eCLIP20.05■□□□□ 0.8
SSR4P1-202ENST00000429427 CTC1Q2NKJ3 1217 aa20.05■□□□□ 0.8
SSR4P1-202ENST00000429427 ARL6IP4Q66PJ3 421 aaKnown RBP20.05■□□□□ 0.8
SSR4P1-202ENST00000429427 FAM173BQ6P4H8 233 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms