RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 NUGGCQ68CJ6 796 aa19.64■□□□□ 0.73
SHANK3-202ENST00000414786 SH3RF3Q8TEJ3 882 aaPredicted RBP19.64■□□□□ 0.73
SHANK3-202ENST00000414786 CDHR1Q96JP9 859 aa19.64■□□□□ 0.73
SHANK3-202ENST00000414786 PRAMEF22A3QJZ6 481 aa19.64■□□□□ 0.73
SHANK3-202ENST00000414786 IQCDQ96DY2 449 aa19.64■□□□□ 0.73
SHANK3-202ENST00000414786 ZNF302Q9NR11 478 aa19.64■□□□□ 0.73
SHANK3-202ENST00000414786 ADAM22Q9P0K1 906 aa19.64■□□□□ 0.73
SHANK3-202ENST00000414786 ITPRIPL1Q6GPH6 555 aa19.64■□□□□ 0.73
SHANK3-202ENST00000414786 TBC1D1Q86TI0 1168 aaPredicted RBP19.64■□□□□ 0.73
SHANK3-202ENST00000414786 STX19Q8N4C7 294 aa19.64■□□□□ 0.73
SHANK3-202ENST00000414786 KIF28PB7ZC32 967 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 MGAT5BQ3V5L5 792 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 MCTP2Q6DN12 878 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 PAWRQ96IZ0 340 aaKnown RBP19.63■□□□□ 0.73
SHANK3-202ENST00000414786 PGRMC1O00264 195 aaKnown RBP19.63■□□□□ 0.73
SHANK3-202ENST00000414786 KRT7P08729 469 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 DARSP14868 501 aaKnown RBP19.63■□□□□ 0.73
SHANK3-202ENST00000414786 ATP5JP18859 108 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 PHKA2P46019 1235 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 PDIK1LQ8N165 341 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 ZMYND12Q9H0C1 365 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 MAD2L2Q9UI95 211 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 ZNF229Q9UJW7 825 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 SEMA3EO15041 775 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 LMNAP02545 664 aaKnown RBP19.63■□□□□ 0.73
SHANK3-202ENST00000414786 RARBP10826 455 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 CYP2B6P20813 491 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 TWF1Q12792 350 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 C1orf146Q5VVC0 180 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 BTNL9Q6UXG8 535 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 C11orf70Q9BRQ4 267 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 PDGFRBP09619 1106 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 BCL2L12Q9HB09 334 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 APOBEC2Q9Y235 224 aaKnown RBP19.63■□□□□ 0.73
SHANK3-202ENST00000414786 PCDHA13Q9Y5I0 950 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 CAPN1P07384 714 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 RALAP11233 206 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 GFAPP14136 432 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 GPSM2P81274 684 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 RAD51Q06609 339 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 TOMM20Q15388 145 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 SLC44A2Q8IWA5 706 aaPredicted RBP19.63■□□□□ 0.73
SHANK3-202ENST00000414786 OR9Q1Q8NGQ5 310 aa19.63■□□□□ 0.73
SHANK3-202ENST00000414786 HMOX2P30519 316 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 EIF4A1P60842 406 aaKnown RBP19.62■□□□□ 0.73
SHANK3-202ENST00000414786 MRPL28Q13084 256 aaKnown RBP19.62■□□□□ 0.73
SHANK3-202ENST00000414786 TOPORSQ9NS56 1045 aaPredicted RBP19.62■□□□□ 0.73
SHANK3-202ENST00000414786 TJP3O95049 919 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 LUC7L3O95232 432 aaKnown RBP19.62■□□□□ 0.73
SHANK3-202ENST00000414786 RGS7P49802 495 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 SYT2Q8N9I0 419 aaPredicted RBP19.62■□□□□ 0.73
SHANK3-202ENST00000414786 CCDC51Q96ER9 411 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 ACAP3Q96P50 834 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 KDM4CQ9H3R0 1056 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 ADCY9O60503 1353 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 SETD1BQ9UPS6 1966 aaKnown RBP19.62■□□□□ 0.73
SHANK3-202ENST00000414786 SLC8A1P32418 973 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 SPP2Q13103 211 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 SRRM1Q8IYB3 904 aaKnown RBP19.62■□□□□ 0.73
SHANK3-202ENST00000414786 SCG3Q8WXD2 468 aaKnown RBP19.62■□□□□ 0.73
SHANK3-202ENST00000414786 ATP6V0A4Q9HBG4 840 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 ANGPTL2Q9UKU9 493 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 STAT3P40763 770 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 MIER2Q8N344 545 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 GOLGA8RI6L899 631 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 LRRC8AQ8IWT6 810 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 RUNDC3BQ96NL0 473 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 IL1RL2Q9HB29 575 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 NCALDP61601 193 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 AP1ARQ63HQ0 302 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.62■□□□□ 0.73
SHANK3-202ENST00000414786 HES6Q96HZ4 224 aa19.62■□□□□ 0.73
SHANK3-202ENST00000414786 WDR75Q8IWA0 830 aaKnown RBP19.61■□□□□ 0.73
SHANK3-202ENST00000414786 GABBR1Q9UBS5 961 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 GYG2O15488 501 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 ENDOD1O94919 500 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 CYP2D6P10635 497 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 MAGED4Q96JG8 741 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 MAP3K20Q9NYL2 800 aaKnown RBP19.61■□□□□ 0.73
SHANK3-202ENST00000414786 PDIA3P30101 505 aaKnown RBP19.61■□□□□ 0.73
SHANK3-202ENST00000414786 SULT1E1P49888 294 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 RPS6P62753 249 aaKnown RBP19.61■□□□□ 0.73
SHANK3-202ENST00000414786 ERAP2Q6P179 960 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 EAF2Q96CJ1 260 aaPredicted RBP19.61■□□□□ 0.73
SHANK3-202ENST00000414786 SH3BP1Q9Y3L3 701 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 CASP1P29466 404 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 CACUL1Q86Y37 369 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 ANKMY2Q8IV38 441 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 GSPT2Q8IYD1 628 aaKnown RBP19.61■□□□□ 0.73
SHANK3-202ENST00000414786 L3MBTL3Q96JM7 780 aaPredicted RBP19.61■□□□□ 0.73
SHANK3-202ENST00000414786 CCDC17Q96LX7 622 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 ZNF512Q96ME7 567 aaPredicted RBP19.61■□□□□ 0.73
SHANK3-202ENST00000414786 WDR47O94967 919 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 FGGP02679 453 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 CDK8P49336 464 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 RALGDSQ12967 914 aa19.61■□□□□ 0.73
SHANK3-202ENST00000414786 C6orf222P0C671 652 aaPredicted RBP19.6■□□□□ 0.73
SHANK3-202ENST00000414786 MAP3K7CLP57077 242 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 SEMA3FQ13275 785 aa19.6■□□□□ 0.73
SHANK3-202ENST00000414786 MTM1Q13496 603 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms