RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 THEMISQ8N1K5 641 aaPredicted RBP4.92□□□□□ -1.62
RPA3-203ENST00000401447 LMF1Q96S06 567 aa4.92□□□□□ -1.62
RPA3-203ENST00000401447 OR10A2Q9H208 303 aa4.92□□□□□ -1.62
RPA3-203ENST00000401447 IFT22Q9H7X7 185 aa4.92□□□□□ -1.62
RPA3-203ENST00000401447 EMC7Q9NPA0 242 aa4.92□□□□□ -1.62
RPA3-203ENST00000401447 SPTLC3Q9NUV7 552 aa4.92□□□□□ -1.62
RPA3-203ENST00000401447 SAE1Q9UBE0 346 aaPredicted RBP4.92□□□□□ -1.62
RPA3-203ENST00000401447 CNOT11Q9UKZ1 510 aaKnown RBP4.92□□□□□ -1.62
RPA3-203ENST00000401447 JAG2Q9Y219 1238 aa4.92□□□□□ -1.62
RPA3-203ENST00000401447 APOBEC2Q9Y235 224 aaKnown RBP4.92□□□□□ -1.62
RPA3-203ENST00000401447 PTPN22Q9Y2R2 807 aa4.92□□□□□ -1.62
RPA3-203ENST00000401447 NR2E1Q9Y466 385 aa4.92□□□□□ -1.62
RPA3-203ENST00000401447 LRP5O75197 1615 aa4.92□□□□□ -1.62
RPA3-203ENST00000401447 PRPF6O94906 941 aaKnown RBP4.91□□□□□ -1.62
RPA3-203ENST00000401447 CNOT4O95628 575 aaKnown RBP4.91□□□□□ -1.62
RPA3-203ENST00000401447 ITGB3P05106 788 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 MASP1P48740 699 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 MRE11P49959 708 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 SESN2P58004 480 aaPredicted RBP4.91□□□□□ -1.62
RPA3-203ENST00000401447 RBM6P78332 1123 aaKnown RBP4.91□□□□□ -1.62
RPA3-203ENST00000401447 SMAD3P84022 425 aaKnown RBP4.91□□□□□ -1.62
RPA3-203ENST00000401447 MYBPC3Q14896 1274 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 PCOLCEQ15113 449 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 KIAA1841Q6NSI8 718 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 ESPNLQ6ZVH7 1005 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 BMP8AQ7Z5Y6 402 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 FILIP1Q7Z7B0 1213 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 UBR7Q8N806 425 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 LRRC37BQ96QE4 947 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 MYL10Q9BUA6 226 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 SEC61A2Q9H9S3 476 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 POLR3BQ9NW08 1133 aaPredicted RBP4.91□□□□□ -1.62
RPA3-203ENST00000401447 MSRAQ9UJ68 235 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 SYNPO2Q9UMS6 1093 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 VWA7Q9Y334 891 aa4.91□□□□□ -1.62
RPA3-203ENST00000401447 RAPGEF6Q8TEU7 1601 aa4.9□□□□□ -1.62
RPA3-203ENST00000401447 ARHGAP6O43182 974 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 TGM5O43548 720 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 ZEB2O60315 1214 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 KDM1AO60341 852 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 ULK1O75385 1050 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 BPIP17213 487 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 NOLC1Q14978 699 aaKnown RBP eCLIP4.9□□□□□ -1.63
RPA3-203ENST00000401447 TERF2Q15554 542 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 EGFLAMQ63HQ2 1017 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 TRIM68Q6AZZ1 485 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 KLHDC10Q6PID8 442 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 USP30Q70CQ3 517 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 LARP4Q71RC2 724 aaKnown RBP eCLIP4.9□□□□□ -1.633e-9■■■□□ 15.3
RPA3-203ENST00000401447 HDGFL2Q7Z4V5 671 aaPredicted RBP4.9□□□□□ -1.63
RPA3-203ENST00000401447 ZNF610Q8N9Z0 462 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 SLC5A5Q92911 643 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 GFM2Q969S9 779 aaKnown RBP4.9□□□□□ -1.63
RPA3-203ENST00000401447 NEIL1Q96FI4 390 aaPredicted RBP4.9□□□□□ -1.63
RPA3-203ENST00000401447 DYDC2Q96IM9 177 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 LOXL4Q96JB6 756 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 MEGF9Q9H1U4 602 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 MTG2Q9H4K7 406 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 PPP4R1LQ9P1A2 415 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 PUF60Q9UHX1 559 aaKnown RBP4.9□□□□□ -1.63
RPA3-203ENST00000401447 DENND2AQ9ULE3 1009 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 DEPDC5O75140 1603 aa4.9□□□□□ -1.63
RPA3-203ENST00000401447 RGS12O14924 1447 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 FGD6Q6ZV73 1430 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 NUP153P49790 1475 aaKnown RBP4.89□□□□□ -1.63
RPA3-203ENST00000401447 LRRC9Q6ZRR7 1453 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 STRCP1A6NGW2 1772 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 KDM5DQ9BY66 1539 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 BRINP1O60477 761 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 H2AFYO75367 372 aaKnown RBP4.89□□□□□ -1.63
RPA3-203ENST00000401447 NFYCQ13952 458 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 RNF151Q2KHN1 245 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 RNF187Q5TA31 235 aaPredicted RBP4.89□□□□□ -1.63
RPA3-203ENST00000401447 LIMS2Q7Z4I7 341 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 GIMAP8Q8ND71 665 aaPredicted RBP4.89□□□□□ -1.63
RPA3-203ENST00000401447 OR14K1Q8NGZ2 314 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 GCDHQ92947 438 aaPredicted RBP4.89□□□□□ -1.63
RPA3-203ENST00000401447 LPPQ93052 612 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 KRTAP17-1Q9BYP8 105 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 C12orf65Q9H3J6 166 aaKnown RBP4.89□□□□□ -1.63
RPA3-203ENST00000401447 MSL2Q9HCI7 577 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 OAZ3Q9UMX2 235 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 LRP6O75581 1613 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 ABCA6Q8N139 1617 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 CTTNBP2Q8WZ74 1663 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 ROBO1Q9Y6N7 1651 aa4.89□□□□□ -1.63
RPA3-203ENST00000401447 NEMP1O14524 444 aa4.88□□□□□ -1.63
RPA3-203ENST00000401447 CDC14BO60729 498 aa4.88□□□□□ -1.63
RPA3-203ENST00000401447 OPHN1O60890 802 aa4.88□□□□□ -1.63
RPA3-203ENST00000401447 PCDH8O95206 1070 aa4.88□□□□□ -1.63
RPA3-203ENST00000401447 VIL1P09327 827 aaKnown RBP4.88□□□□□ -1.63
RPA3-203ENST00000401447 SESN3P58005 492 aa4.88□□□□□ -1.63
RPA3-203ENST00000401447 ADAM15Q13444 863 aa4.88□□□□□ -1.63
RPA3-203ENST00000401447 SPATS1Q496A3 300 aa4.88□□□□□ -1.63
RPA3-203ENST00000401447 BROXQ5VW32 411 aa4.88□□□□□ -1.63
RPA3-203ENST00000401447 FRMD7Q6ZUT3 714 aa4.88□□□□□ -1.63
RPA3-203ENST00000401447 KANSL1Q7Z3B3 1105 aa4.88□□□□□ -1.63
RPA3-203ENST00000401447 KRT26Q7Z3Y9 468 aa4.88□□□□□ -1.63
RPA3-203ENST00000401447 AFAP1L2Q8N4X5 818 aa4.88□□□□□ -1.63
RPA3-203ENST00000401447 TTC9BQ8N6N2 239 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms