RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 ADD3Q9UEY8 706 aaKnown RBP9.2□□□□□ -0.94
TDP1-201ENST00000335725 PNMA3Q9UL41 463 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 TRIM33Q9UPN9 1127 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 TLL2Q9Y6L7 1015 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 HGSO14964 777 aaPredicted RBP9.19□□□□□ -0.94
TDP1-201ENST00000335725 TEX33O43247 280 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 ANXA13P27216 316 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 PRCPP42785 496 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 PIP4K2AP48426 406 aaPredicted RBP9.19□□□□□ -0.94
TDP1-201ENST00000335725 CYP2U1Q7Z449 544 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 FITM2Q8N6M3 262 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 TBC1D16Q8TBP0 767 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 SGCDQ92629 289 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 ZFRQ96KR1 1074 aaKnown RBP9.19□□□□□ -0.94
TDP1-201ENST00000335725 AIFM3Q96NN9 605 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 PLVAPQ9BX97 442 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 HMG20BQ9P0W2 317 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 UTP11Q9Y3A2 253 aaKnown RBP9.19□□□□□ -0.94
TDP1-201ENST00000335725 PTPRTO14522 1441 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 CARMIL2Q6F5E8 1435 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 STAMBPO95630 424 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 CTRB1P17538 263 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 HOXD13P35453 343 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 UBA7P41226 1012 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 DNAJC3Q13217 504 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 EPHA7Q15375 998 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 PHKG1Q16816 387 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 CTRB2Q6GPI1 263 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 C4orf22Q6V702 233 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 RBM44Q6ZP01 1051 aaKnown RBP9.19□□□□□ -0.94
TDP1-201ENST00000335725 SATL1Q86VE3 508 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 LILRB4Q8NHJ6 448 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 TTC8Q8TAM2 541 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 ZC3H15Q8WU90 426 aaKnown RBP9.19□□□□□ -0.94
TDP1-201ENST00000335725 CCDC138Q96M89 665 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 NLRP3Q96P20 1036 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 TRIM55Q9BYV6 548 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 SEMA4AQ9H3S1 761 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 DENND2DQ9H6A0 471 aaPredicted RBP9.19□□□□□ -0.94
TDP1-201ENST00000335725 DNAJC5BQ9UF47 199 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 GGT7Q9UJ14 662 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 ERVK-11Q9UQG0 969 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 DNAJC16Q9Y2G8 782 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 MAST1Q9Y2H9 1570 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 GUCY1B2O75343 617 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 FKBP9O95302 570 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 GM2AP17900 193 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 SLC1A1P43005 524 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 IGBP1P78318 339 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 RASSF7Q02833 373 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 MED21Q13503 144 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 PNOCQ13519 176 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 ACVR2BQ13705 512 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 GIT2Q14161 759 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 PROSER3Q2NL68 480 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 PTCD2Q8WV60 388 aaKnown RBP9.19□□□□□ -0.94
TDP1-201ENST00000335725 CASKIN2Q8WXE0 1202 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 RMDN1Q96DB5 314 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 PRMT1Q99873 361 aaKnown RBP9.19□□□□□ -0.94
TDP1-201ENST00000335725 SENP3Q9H4L4 574 aaPredicted RBP9.19□□□□□ -0.94
TDP1-201ENST00000335725 USP29Q9HBJ7 922 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 SLC38A10Q9HBR0 1119 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 AIPL1Q9NZN9 384 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 RABGEF1Q9UJ41 708 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 DOLKQ9UPQ8 538 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 IFT52Q9Y366 437 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 IQGAP1P46940 1657 aa9.19□□□□□ -0.94
TDP1-201ENST00000335725 CEP152O94986 1710 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 IQANK1A0A1B0GTG1 560 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 CCDC169A6NNP5 214 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 B4GALT4O60513 344 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 ENTPD5O75356 428 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 ESRRAP11474 423 aaPredicted RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 RXRAP19793 462 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 ETFBP38117 255 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 RPL26P61254 145 aaKnown RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 SPAG1Q07617 926 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 GPR162Q16538 588 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 NDUFAF5Q5TEU4 345 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 OTUD7BQ6GQQ9 843 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 ZCCHC8Q6NZY4 707 aaKnown RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 KLHDC10Q6PID8 442 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 NET1Q7Z628 596 aaPredicted RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 CLVS1Q8IUQ0 354 aaPredicted RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 MMAAQ8IVH4 418 aaKnown RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 ALLCQ8N6M5 410 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 NPLOC4Q8TAT6 608 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 BRSK1Q8TDC3 778 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 PGBD4Q96DM1 585 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 TBC1D10AQ9BXI6 508 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 STK17AQ9UEE5 414 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 IP6K2Q9UHH9 426 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 MKL2Q9ULH7 1088 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 REXO2Q9Y3B8 237 aaKnown RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 ANGPTL3Q9Y5C1 460 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 URB2Q14146 1524 aaKnown RBP9.18□□□□□ -0.94
TDP1-201ENST00000335725 ANKARQ7Z5J8 1434 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 GRID2IPA4D2P6 1211 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 EYA4O95677 639 aa9.18□□□□□ -0.94
TDP1-201ENST00000335725 PLCD1P51178 756 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms