RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 SLC16A3O15427 465 aaKnown RBP17.53■□□□□ 0.4
UPK3B-202ENST00000334348 ALAS1P13196 640 aa17.53■□□□□ 0.4
UPK3B-202ENST00000334348 SOX5P35711 763 aa17.53■□□□□ 0.4
UPK3B-202ENST00000334348 PEX19P40855 299 aa17.53■□□□□ 0.4
UPK3B-202ENST00000334348 CDK8P49336 464 aa17.53■□□□□ 0.4
UPK3B-202ENST00000334348 SLC12A3P55017 1021 aa17.53■□□□□ 0.4
UPK3B-202ENST00000334348 LRRC14Q15048 493 aa17.53■□□□□ 0.4
UPK3B-202ENST00000334348 TCERG1LQ5VWI1 586 aa17.53■□□□□ 0.4
UPK3B-202ENST00000334348 NUGGCQ68CJ6 796 aa17.53■□□□□ 0.4
UPK3B-202ENST00000334348 EPM2AIP1Q7L775 607 aaPredicted RBP17.53■□□□□ 0.4
UPK3B-202ENST00000334348 TEX9Q8N6V9 391 aa17.53■□□□□ 0.4
UPK3B-202ENST00000334348 PRELID2Q8N945 189 aa17.53■□□□□ 0.4
UPK3B-202ENST00000334348 TGFBRAP1Q8WUH2 860 aa17.53■□□□□ 0.4
UPK3B-202ENST00000334348 JAG2Q9Y219 1238 aa17.53■□□□□ 0.4
UPK3B-202ENST00000334348 SNED1Q8TER0 1413 aa17.53■□□□□ 0.4
UPK3B-202ENST00000334348 POTEB3A0JP26 581 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 POTECB2RU33 542 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 BAG3O95817 575 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 CCNB1P14635 433 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 ABCB4P21439 1286 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 CTNNA2P26232 953 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 HOXD13P35453 343 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 ABL2P42684 1182 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 INHBEP58166 350 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 PPP4CP60510 307 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 DIXDC1Q155Q3 683 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 POTEBQ6S5H4 581 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 EGFL6Q8IUX8 553 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 SYNGAP1Q96PV0 1343 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 SYT11Q9BT88 431 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 TRIM7Q9C029 511 aa17.52■□□□□ 0.4
UPK3B-202ENST00000334348 PDGFDQ9GZP0 370 aaPredicted RBP17.52■□□□□ 0.4
UPK3B-202ENST00000334348 TMEM120BA0PK00 339 aa17.52■□□□□ 0.39
UPK3B-202ENST00000334348 PDE6BP35913 854 aa17.52■□□□□ 0.39
UPK3B-202ENST00000334348 CLK2P49760 499 aaKnown RBP17.52■□□□□ 0.39
UPK3B-202ENST00000334348 C16orf86Q6ZW13 317 aa17.52■□□□□ 0.39
UPK3B-202ENST00000334348 DHX37Q8IY37 1157 aaKnown RBP17.52■□□□□ 0.39
UPK3B-202ENST00000334348 CKAP2Q8WWK9 683 aa17.52■□□□□ 0.39
UPK3B-202ENST00000334348 ART4Q93070 314 aa17.52■□□□□ 0.39
UPK3B-202ENST00000334348 ARHGEF26Q96DR7 871 aa17.52■□□□□ 0.39
UPK3B-202ENST00000334348 TAOK3Q9H2K8 898 aa17.52■□□□□ 0.39
UPK3B-202ENST00000334348 DHX36Q9H2U1 1008 aaKnown RBP17.52■□□□□ 0.39
UPK3B-202ENST00000334348 GNPATO15228 680 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 LINGO3P0C6S8 592 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 RPL13P26373 211 aaKnown RBP17.51■□□□□ 0.39
UPK3B-202ENST00000334348 NOVP48745 357 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 ZNF568Q3ZCX4 644 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 PPP1R18Q6NYC8 613 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 VSTM1Q6UX27 236 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 MGARPQ8TDB4 240 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 ARHGEF2Q92974 986 aaKnown RBP17.51■□□□□ 0.39
UPK3B-202ENST00000334348 CEP95Q96GE4 821 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 NAF1Q96HR8 494 aaKnown RBP17.51■□□□□ 0.39
UPK3B-202ENST00000334348 SERPINB12Q96P63 405 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 STK33Q9BYT3 514 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 TMOD4Q9NZQ9 345 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 ZFATQ9P243 1243 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 SAP30BPQ9UHR5 308 aaKnown RBP17.51■□□□□ 0.39
UPK3B-202ENST00000334348 RTCBQ9Y3I0 505 aaKnown RBP17.51■□□□□ 0.39
UPK3B-202ENST00000334348 TAF1LQ8IZX4 1826 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 MIF4GDA9UHW6 222 aaKnown RBP17.51■□□□□ 0.39
UPK3B-202ENST00000334348 GGPS1O95749 300 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 NR3C1P04150 777 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 LDHBP07195 334 aaKnown RBP17.51■□□□□ 0.39
UPK3B-202ENST00000334348 MKRN3Q13064 507 aaKnown RBP17.51■□□□□ 0.39
UPK3B-202ENST00000334348 BIRC2Q13490 618 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 GIT2Q14161 759 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 TAF11Q15544 211 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 SLC27A3Q5K4L6 730 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 RNF43Q68DV7 783 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 TTC27Q6P3X3 843 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 TRMT10CQ7L0Y3 403 aaKnown RBP17.51■□□□□ 0.39
UPK3B-202ENST00000334348 RAB3IPQ96QF0 476 aaPredicted RBP17.51■□□□□ 0.39
UPK3B-202ENST00000334348 ANKRD2Q9GZV1 360 aa17.51■□□□□ 0.39
UPK3B-202ENST00000334348 PLCG2P16885 1265 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 ATP5DP30049 168 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 HADHBP55084 474 aaKnown RBP17.5■□□□□ 0.39
UPK3B-202ENST00000334348 CCDC15Q0P6D6 951 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 UBE2SQ16763 222 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 CCDC137Q6PK04 289 aaKnown RBP17.5■□□□□ 0.39
UPK3B-202ENST00000334348 CYFIP1Q7L576 1253 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 MAPKAPK5Q8IW41 473 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 TYW1Q9NV66 732 aaKnown RBP17.5■□□□□ 0.39
UPK3B-202ENST00000334348 COG5Q9UP83 839 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 TRIM33Q9UPN9 1127 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 ZNF652Q9Y2D9 606 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 ALG6Q9Y672 507 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 FRMPD2Q68DX3 1309 aaPredicted RBP17.5■□□□□ 0.39
UPK3B-202ENST00000334348 ANKRD62A6NC57 917 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 KLHL33A6NCF5 533 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 ANKRD33BA6NCL7 494 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 ENO4A6NNW6 628 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 CASP4P49662 377 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 GSTO1P78417 241 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 AP1ARQ63HQ0 302 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 AADACL2Q6P093 401 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 UBL4BQ8N7F7 174 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 NAP1L4Q99733 375 aaKnown RBP17.5■□□□□ 0.39
UPK3B-202ENST00000334348 THAP2Q9H0W7 228 aa17.5■□□□□ 0.39
UPK3B-202ENST00000334348 LRRC42Q9Y546 428 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms