RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 MYZAPP0CAP1 466 aa18.86■□□□□ 0.61
COL9A1-201ENST00000320755 MYCLP12524 364 aaPredicted RBP18.86■□□□□ 0.61
COL9A1-201ENST00000320755 EIF2AK2P19525 551 aaKnown RBP18.86■□□□□ 0.61
COL9A1-201ENST00000320755 LIG3P49916 1009 aa18.86■□□□□ 0.61
COL9A1-201ENST00000320755 DHX9Q08211 1270 aaKnown RBP18.86■□□□□ 0.61
COL9A1-201ENST00000320755 DCAF12L1Q5VU92 463 aa18.86■□□□□ 0.61
COL9A1-201ENST00000320755 RSBN1LQ6PCB5 846 aaPredicted RBP18.86■□□□□ 0.61
COL9A1-201ENST00000320755 CCDC127Q96BQ5 260 aa18.86■□□□□ 0.61
COL9A1-201ENST00000320755 CALR3Q96L12 384 aaKnown RBP18.86■□□□□ 0.61
COL9A1-201ENST00000320755 INTUQ9ULD6 942 aa18.86■□□□□ 0.61
COL9A1-201ENST00000320755 VGLL3A8MV65 326 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 ATMINO43313 823 aaPredicted RBP18.85■□□□□ 0.61
COL9A1-201ENST00000320755 SKOR1P84550 965 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 UTP11Q9Y3A2 253 aaKnown RBP18.85■□□□□ 0.61
COL9A1-201ENST00000320755 CCDC188H7C350 402 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 SLC16A4O15374 487 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 CCDC172P0C7W6 258 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 LSP1P33241 339 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 VAMP7P51809 220 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 LRRC45Q96CN5 670 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 AGPAT1Q99943 283 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 RAVER2Q9HCJ3 691 aaKnown RBP18.85■□□□□ 0.61
COL9A1-201ENST00000320755 PPANQ9NQ55 473 aaKnown RBP18.85■□□□□ 0.61
COL9A1-201ENST00000320755 PLSCR1O15162 318 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 ANXA13P27216 316 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 PEX3P56589 373 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 SETQ01105 290 aaPredicted RBP18.85■□□□□ 0.61
COL9A1-201ENST00000320755 PPP2R5AQ15172 486 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 MICALL1Q8N3F8 863 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 ALG3Q92685 438 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 ERVK-5Q9HDB9 667 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 ATP8A1Q9Y2Q0 1164 aa18.85■□□□□ 0.61
COL9A1-201ENST00000320755 BRWD3Q6RI45 1802 aa18.84■□□□□ 0.61
COL9A1-201ENST00000320755 BCRP11274 1271 aa18.84■□□□□ 0.61
COL9A1-201ENST00000320755 GUCY2CP25092 1073 aa18.84■□□□□ 0.61
COL9A1-201ENST00000320755 MAGEA9P43362 315 aa18.84■□□□□ 0.61
COL9A1-201ENST00000320755 ITGB3BPQ13352 177 aaPredicted RBP18.84■□□□□ 0.61
COL9A1-201ENST00000320755 KIFC3Q9BVG8 833 aa18.84■□□□□ 0.61
COL9A1-201ENST00000320755 CAP2P40123 477 aa18.84■□□□□ 0.61
COL9A1-201ENST00000320755 NPEPPSP55786 919 aa18.84■□□□□ 0.61
COL9A1-201ENST00000320755 MESDQ14696 234 aa18.84■□□□□ 0.61
COL9A1-201ENST00000320755 RPUSD2Q8IZ73 545 aaKnown RBP18.84■□□□□ 0.61
COL9A1-201ENST00000320755 PPM1KQ8N3J5 372 aa18.84■□□□□ 0.61
COL9A1-201ENST00000320755 RASGEF1CQ8N431 466 aa18.84■□□□□ 0.61
COL9A1-201ENST00000320755 ALG6Q9Y672 507 aa18.84■□□□□ 0.61
COL9A1-201ENST00000320755 DDX3YO15523 660 aaKnown RBP18.83■□□□□ 0.61
COL9A1-201ENST00000320755 P4HBP07237 508 aaKnown RBP18.83■□□□□ 0.61
COL9A1-201ENST00000320755 MARCKSL1P49006 195 aa18.83■□□□□ 0.61
COL9A1-201ENST00000320755 MAP2K1Q02750 393 aaPredicted RBP18.83■□□□□ 0.61
COL9A1-201ENST00000320755 CETN1Q12798 172 aa18.83■□□□□ 0.61
COL9A1-201ENST00000320755 MKRN4PQ13434 485 aaPredicted RBP18.83■□□□□ 0.61
COL9A1-201ENST00000320755 TNIP1Q15025 636 aa18.83■□□□□ 0.61
COL9A1-201ENST00000320755 KDM7AQ6ZMT4 941 aa18.83■□□□□ 0.61
COL9A1-201ENST00000320755 LMO3Q8TAP4 145 aa18.83■□□□□ 0.61
COL9A1-201ENST00000320755 TCEAL9Q9UHQ7 104 aa18.83■□□□□ 0.61
COL9A1-201ENST00000320755 FEM1BQ9UK73 627 aa18.83■□□□□ 0.61
COL9A1-201ENST00000320755 ANKRD62A6NC57 917 aa18.83■□□□□ 0.6
COL9A1-201ENST00000320755 CCDC169A6NNP5 214 aa18.83■□□□□ 0.6
COL9A1-201ENST00000320755 BACH1O14867 736 aa18.83■□□□□ 0.6
COL9A1-201ENST00000320755 PPATQ06203 517 aa18.83■□□□□ 0.6
COL9A1-201ENST00000320755 FAM102BQ5T8I3 360 aa18.83■□□□□ 0.6
COL9A1-201ENST00000320755 PLA2G4FQ68DD2 849 aa18.83■□□□□ 0.6
COL9A1-201ENST00000320755 HAUS6Q7Z4H7 955 aa18.83■□□□□ 0.6
COL9A1-201ENST00000320755 FAM160B2Q86V87 743 aa18.83■□□□□ 0.6
COL9A1-201ENST00000320755 SAAL1Q96ER3 474 aa18.83■□□□□ 0.6
COL9A1-201ENST00000320755 POP1Q99575 1024 aaKnown RBP18.83■□□□□ 0.6
COL9A1-201ENST00000320755 LRRC4CQ9HCJ2 640 aa18.83■□□□□ 0.6
COL9A1-201ENST00000320755 HSPBP1Q9NZL4 362 aa18.83■□□□□ 0.6
COL9A1-201ENST00000320755 CNTNAP1P78357 1384 aa18.83■□□□□ 0.6
COL9A1-201ENST00000320755 RARRES1P49788 294 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 ZNF844Q08AG5 666 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 KCTD17Q8N5Z5 321 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 KRT35Q92764 455 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 FAM84AQ96KN4 292 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 RIT2Q99578 217 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 TMBIM4Q9HC24 238 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 E7EVH7 732 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 PPP1R37O75864 691 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 SGPL1O95470 568 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 TMOD1P28289 359 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 NFIL3Q16649 462 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 NBPF9Q3BBW0 867 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 CD302Q8IX05 232 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 PLEKHO2Q8TD55 490 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 BTBD6Q96KE9 485 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 ACCSQ96QU6 501 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 SYT11Q9BT88 431 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 SLITRK6Q9H5Y7 841 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 KCND2Q9NZV8 630 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 SNX24Q9Y343 169 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 HMGB1P1B2RPK0 211 aaPredicted RBP18.82■□□□□ 0.6
COL9A1-201ENST00000320755 DR1Q01658 176 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 IFFO1Q0D2I5 559 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 SPP2Q13103 211 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 MTMR1Q13613 665 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 UGCGQ16739 394 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 TKFCQ3LXA3 575 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 INTS8Q75QN2 995 aaKnown RBP18.82■□□□□ 0.6
COL9A1-201ENST00000320755 CPNE8Q86YQ8 564 aa18.82■□□□□ 0.6
COL9A1-201ENST00000320755 XXYLT1Q8NBI6 393 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms