RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 TLK2Q86UE8 772 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 FAM178BQ8IXR5 827 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 BBXQ8WY36 941 aaPredicted RBP24.77■■□□□ 1.56
CDX1-201ENST00000231656 TIPINQ9BVW5 301 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 EDEM3Q9BZQ6 932 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 LZTFL1Q9NQ48 299 aa24.77■■□□□ 1.56
CDX1-201ENST00000231656 DGAT1O75907 488 aa24.76■■□□□ 1.55
CDX1-201ENST00000231656 AKR1A1P14550 325 aa24.76■■□□□ 1.55
CDX1-201ENST00000231656 RPL13P26373 211 aaKnown RBP24.76■■□□□ 1.55
CDX1-201ENST00000231656 ARHGAP25P42331 645 aa24.76■■□□□ 1.55
CDX1-201ENST00000231656 TRIM32Q13049 653 aa24.76■■□□□ 1.55
CDX1-201ENST00000231656 BAP1Q92560 729 aa24.76■■□□□ 1.55
CDX1-201ENST00000231656 CEP89Q96ST8 783 aa24.76■■□□□ 1.55
CDX1-201ENST00000231656 BEGAINQ9BUH8 593 aa24.76■■□□□ 1.55
CDX1-201ENST00000231656 STRA6Q9BX79 667 aa24.76■■□□□ 1.55
CDX1-201ENST00000231656 TSKSQ9UJT2 592 aa24.76■■□□□ 1.55
CDX1-201ENST00000231656 Q9Y3F1 56 aa24.76■■□□□ 1.55
CDX1-201ENST00000231656 A6NJR5 290 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 SLC16A3O15427 465 aaKnown RBP24.75■■□□□ 1.55
CDX1-201ENST00000231656 PPP1R37O75864 691 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 CACNB2Q08289 660 aaPredicted RBP24.75■■□□□ 1.55
CDX1-201ENST00000231656 PLCB4Q15147 1175 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 TARBP2Q15633 366 aaKnown RBP24.75■■□□□ 1.55
CDX1-201ENST00000231656 ODR4Q5SWX8 454 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 NEK11Q8NG66 645 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 ATP8B4Q8TF62 1192 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 PDLIM7Q9NR12 457 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 ERAP1Q9NZ08 941 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 ARMCX3Q9UH62 379 aaPredicted RBP24.75■■□□□ 1.55
CDX1-201ENST00000231656 PLAGL2Q9UPG8 496 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 ADCY3O60266 1144 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 AKAP3O75969 853 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 ZNF286BP0CG31 522 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 CASQ1P31415 396 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 DGKDQ16760 1214 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 STXBP4Q6ZWJ1 553 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 C16orf70Q9BSU1 422 aa24.75■■□□□ 1.55
CDX1-201ENST00000231656 IRX2Q9BZI1 471 aaPredicted RBP24.75■■□□□ 1.55
CDX1-201ENST00000231656 ZNF215Q9UL58 517 aaPredicted RBP24.75■■□□□ 1.55
CDX1-201ENST00000231656 SLU7O95391 586 aaKnown RBP24.74■■□□□ 1.55
CDX1-201ENST00000231656 ARHGEF6Q15052 776 aa24.74■■□□□ 1.55
CDX1-201ENST00000231656 CCDC170Q8IYT3 715 aa24.74■■□□□ 1.55
CDX1-201ENST00000231656 RAET1EQ8TD07 263 aa24.74■■□□□ 1.55
CDX1-201ENST00000231656 DRC1Q96MC2 740 aa24.74■■□□□ 1.55
CDX1-201ENST00000231656 IKZF4Q9H2S9 585 aa24.74■■□□□ 1.55
CDX1-201ENST00000231656 NHEJ1Q9H9Q4 299 aaPredicted RBP24.74■■□□□ 1.55
CDX1-201ENST00000231656 GPRC5CQ9NQ84 441 aa24.74■■□□□ 1.55
CDX1-201ENST00000231656 CLIC2O15247 247 aa24.73■■□□□ 1.55
CDX1-201ENST00000231656 NOL4O94818 638 aa24.73■■□□□ 1.55
CDX1-201ENST00000231656 PPP2R3AQ06190 1150 aa24.73■■□□□ 1.55
CDX1-201ENST00000231656 KCNH2Q12809 1159 aa24.73■■□□□ 1.55
CDX1-201ENST00000231656 FAM102BQ5T8I3 360 aa24.73■■□□□ 1.55
CDX1-201ENST00000231656 MCPH1Q8NEM0 835 aa24.73■■□□□ 1.55
CDX1-201ENST00000231656 RNPEPQ9H4A4 650 aa24.73■■□□□ 1.55
CDX1-201ENST00000231656 DHX33Q9H6R0 707 aaKnown RBP24.73■■□□□ 1.55
CDX1-201ENST00000231656 ATP6V0A4Q9HBG4 840 aa24.73■■□□□ 1.55
CDX1-201ENST00000231656 XPNPEP1Q9NQW7 623 aa24.73■■□□□ 1.55
CDX1-201ENST00000231656 PCDHB13Q9Y5F0 798 aa24.73■■□□□ 1.55
CDX1-201ENST00000231656 KIF5CO60282 957 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 MAPTP10636 758 aaKnown RBP24.72■■□□□ 1.55
CDX1-201ENST00000231656 CASP4P49662 377 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 POLGP54098 1239 aaPredicted RBP24.72■■□□□ 1.55
CDX1-201ENST00000231656 KSR1Q8IVT5 923 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 ZNF710Q8N1W2 664 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 LSM14BQ9BX40 385 aaKnown RBP24.72■■□□□ 1.55
CDX1-201ENST00000231656 AP5M1Q9H0R1 490 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 METTL14Q9HCE5 456 aaKnown RBP24.72■■□□□ 1.55
CDX1-201ENST00000231656 LARSQ9P2J5 1176 aaKnown RBP24.72■■□□□ 1.55
CDX1-201ENST00000231656 TRPC6Q9Y210 931 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 ZBTB42B2RXF5 422 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 EIF3CLB5ME19 914 aaKnown RBP24.72■■□□□ 1.55
CDX1-201ENST00000231656 DUSP11O75319 330 aaKnown RBP24.72■■□□□ 1.55
CDX1-201ENST00000231656 ABL1P00519 1130 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 EPB41P11171 864 aaKnown RBP24.72■■□□□ 1.55
CDX1-201ENST00000231656 PRKAR2AP13861 404 aaKnown RBP24.72■■□□□ 1.55
CDX1-201ENST00000231656 CNGA1P29973 690 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 CYLC1P35663 651 aaPredicted RBP24.72■■□□□ 1.55
CDX1-201ENST00000231656 IRX5P78411 483 aaPredicted RBP24.72■■□□□ 1.55
CDX1-201ENST00000231656 EMC2Q15006 297 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 ARHGAP29Q52LW3 1261 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 PDXDC1Q6P996 788 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 BORCS6Q96GS4 357 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 EIF3CQ99613 913 aaKnown RBP24.72■■□□□ 1.55
CDX1-201ENST00000231656 CEP72Q9P209 647 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 PPME1Q9Y570 386 aa24.72■■□□□ 1.55
CDX1-201ENST00000231656 LRRC53A6NM62 1247 aa24.71■■□□□ 1.55
CDX1-201ENST00000231656 H3BRB1 525 aa24.71■■□□□ 1.55
CDX1-201ENST00000231656 SEPT4O43236 478 aa24.71■■□□□ 1.55
CDX1-201ENST00000231656 HBP1O60381 514 aa24.71■■□□□ 1.55
CDX1-201ENST00000231656 HMGCRP04035 888 aa24.71■■□□□ 1.55
CDX1-201ENST00000231656 PLS3P13797 630 aa24.71■■□□□ 1.55
CDX1-201ENST00000231656 RFC5P40937 340 aa24.71■■□□□ 1.55
CDX1-201ENST00000231656 SOX10P56693 466 aa24.71■■□□□ 1.55
CDX1-201ENST00000231656 RRAGAQ7L523 313 aa24.71■■□□□ 1.55
CDX1-201ENST00000231656 PXYLP1Q8TE99 480 aa24.71■■□□□ 1.55
CDX1-201ENST00000231656 SLC7A3Q8WY07 619 aa24.71■■□□□ 1.55
CDX1-201ENST00000231656 KIFAP3Q92845 792 aa24.71■■□□□ 1.55
CDX1-201ENST00000231656 TUT1Q9H6E5 874 aaKnown RBP24.71■■□□□ 1.55
CDX1-201ENST00000231656 URI1O94763 535 aaPredicted RBP24.7■■□□□ 1.55
CDX1-201ENST00000231656 AFPP02771 609 aaKnown RBP24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms