RNA–Protein interactions for RNA: YPR065W

ROX1, Transcript of Heme-dependent repressor of hypoxic genes, yeastyeast

Gene ROX1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROX1YPR065W YJR054WP47114 497 aa1.78□□□□□ -2.12
ROX1YPR065W TAF6P53040 516 aa1.78□□□□□ -2.12
ROX1YPR065W YGR015CP53208 328 aa1.78□□□□□ -2.12
ROX1YPR065W VHT1P53241 593 aa1.78□□□□□ -2.12
ROX1YPR065W PXR1P53335 271 aaPredicted RBP1.78□□□□□ -2.12
ROX1YPR065W SUR7P54003 302 aa1.78□□□□□ -2.12
ROX1YPR065W CAB5Q03941 241 aa1.78□□□□□ -2.12
ROX1YPR065W MMT2Q08970 484 aa1.78□□□□□ -2.12
ROX1YPR065W YPQ1Q12010 308 aa1.78□□□□□ -2.12
ROX1YPR065W SLM3Q12093 417 aa1.78□□□□□ -2.12
ROX1YPR065W MHP1P43638 1398 aa1.77□□□□□ -2.13
ROX1YPR065W STE2D6VTK4 431 aa1.77□□□□□ -2.13
ROX1YPR065W GCD2P12754 651 aaPredicted RBP1.77□□□□□ -2.13
ROX1YPR065W PET18P25362 215 aa1.77□□□□□ -2.13
ROX1YPR065W DCC1P25559 380 aa1.77□□□□□ -2.13
ROX1YPR065W ACB1P31787 87 aa1.77□□□□□ -2.13
ROX1YPR065W SPS19P32573 292 aaKnown RBP1.77□□□□□ -2.13
ROX1YPR065W MRPL27P36526 146 aaPredicted RBP1.77□□□□□ -2.13
ROX1YPR065W UTP25P40498 721 aaKnown RBP1.77□□□□□ -2.13
ROX1YPR065W YFL012WP43580 148 aa1.77□□□□□ -2.13
ROX1YPR065W SEH1P53011 349 aaKnown RBP1.77□□□□□ -2.13
ROX1YPR065W RMI1Q02685 241 aa1.77□□□□□ -2.13
ROX1YPR065W IRC4Q03036 179 aa1.77□□□□□ -2.13
ROX1YPR065W ECM11Q04110 302 aa1.77□□□□□ -2.13
ROX1YPR065W ALE1Q08548 619 aa1.77□□□□□ -2.13
ROX1YPR065W YOR376WQ08900 122 aa1.77□□□□□ -2.13
ROX1YPR065W SAM4Q08985 325 aaKnown RBP1.77□□□□□ -2.13
ROX1YPR065W CBP2P03874 630 aaPredicted RBP1.76□□□□□ -2.13
ROX1YPR065W RAD7P06779 565 aa1.76□□□□□ -2.13
ROX1YPR065W CBP6P07253 162 aaPredicted RBP1.76□□□□□ -2.13
ROX1YPR065W ERD1P16151 362 aa1.76□□□□□ -2.13
ROX1YPR065W ZRT1P32804 376 aa1.76□□□□□ -2.13
ROX1YPR065W BUD2P33314 1104 aa1.76□□□□□ -2.13
ROX1YPR065W YMR262WP38430 313 aa1.76□□□□□ -2.13
ROX1YPR065W SMF2P38778 549 aa1.76□□□□□ -2.13
ROX1YPR065W SEO1P39709 593 aa1.76□□□□□ -2.13
ROX1YPR065W ALD5P40047 520 aaKnown RBP1.76□□□□□ -2.13
ROX1YPR065W VOA1P53262 265 aa1.76□□□□□ -2.13
ROX1YPR065W YPL080CQ02826 108 aa1.76□□□□□ -2.13
ROX1YPR065W VPS20Q04272 221 aa1.76□□□□□ -2.13
ROX1YPR065W TAF10Q12030 206 aa1.76□□□□□ -2.13
ROX1YPR065W RPN6Q12377 434 aa1.76□□□□□ -2.13
ROX1YPR065W PFK27Q12471 397 aaPredicted RBP1.76□□□□□ -2.13
ROX1YPR065W ADH1P00330 348 aaKnown RBP1.75□□□□□ -2.13
ROX1YPR065W RPS19AP07280 144 aaKnown RBP1.75□□□□□ -2.13
ROX1YPR065W RPS19BP07281 144 aaPredicted RBP1.75□□□□□ -2.13
ROX1YPR065W SPS100P13130 326 aa1.75□□□□□ -2.13
ROX1YPR065W PUT4P15380 627 aa1.75□□□□□ -2.13
ROX1YPR065W SAR1P20606 190 aaKnown RBP1.75□□□□□ -2.13
ROX1YPR065W ECT1P33412 323 aa1.75□□□□□ -2.13
ROX1YPR065W SHE1P38200 338 aa1.75□□□□□ -2.13
ROX1YPR065W SHE3P38272 425 aaKnown RBP1.75□□□□□ -2.13
ROX1YPR065W GGC1P38988 300 aa1.75□□□□□ -2.13
ROX1YPR065W MNN9P39107 395 aaKnown RBP1.75□□□□□ -2.13
ROX1YPR065W PGU1P47180 361 aa1.75□□□□□ -2.13
ROX1YPR065W FLC3P53121 802 aa1.75□□□□□ -2.13
ROX1YPR065W YGR266WP53326 701 aa1.75□□□□□ -2.13
ROX1YPR065W ARP5P53946 755 aa1.75□□□□□ -2.13
ROX1YPR065W PRO2P54885 456 aaKnown RBP1.75□□□□□ -2.13
ROX1YPR065W STE23Q06010 1027 aa1.75□□□□□ -2.13
ROX1YPR065W PBP4Q07362 185 aaKnown RBP1.75□□□□□ -2.13
ROX1YPR065W YOL029CQ08187 201 aa1.75□□□□□ -2.13
ROX1YPR065W FLO11P08640 1367 aa1.74□□□□□ -2.13
ROX1YPR065W REP1P03871 373 aa1.74□□□□□ -2.13
ROX1YPR065W CAR2P07991 424 aaKnown RBP1.74□□□□□ -2.13
ROX1YPR065W INO2P26798 304 aa1.74□□□□□ -2.13
ROX1YPR065W ZIP1P31111 875 aa1.74□□□□□ -2.13
ROX1YPR065W DTR1P38125 572 aa1.74□□□□□ -2.13
ROX1YPR065W SMP1P38128 452 aa1.74□□□□□ -2.13
ROX1YPR065W TAE1P38340 232 aa1.74□□□□□ -2.13
ROX1YPR065W EFM1P38732 585 aa1.74□□□□□ -2.13
ROX1YPR065W FET3P38993 636 aa1.74□□□□□ -2.13
ROX1YPR065W RRT13P40042 185 aa1.74□□□□□ -2.13
ROX1YPR065W RIB4P50861 169 aaPredicted RBP1.74□□□□□ -2.13
ROX1YPR065W YGR018CP53211 109 aa1.74□□□□□ -2.13
ROX1YPR065W UTP15Q04305 513 aaKnown RBP1.74□□□□□ -2.13
ROX1YPR065W API2Q04413 109 aa1.74□□□□□ -2.13
ROX1YPR065W MRX9Q07349 420 aaKnown RBP1.74□□□□□ -2.13
ROX1YPR065W DTD1Q07648 150 aaKnown RBP1.74□□□□□ -2.13
ROX1YPR065W RPN8Q08723 338 aaKnown RBP1.74□□□□□ -2.13
ROX1YPR065W RDL2Q08742 149 aaKnown RBP1.74□□□□□ -2.13
ROX1YPR065W TFC7Q12415 435 aa1.74□□□□□ -2.13
ROX1YPR065W YBL111CQ3E7Y5 667 aa1.74□□□□□ -2.13
ROX1YPR065W GAL7P08431 366 aa1.73□□□□□ -2.13
ROX1YPR065W DAL80P26343 269 aa1.73□□□□□ -2.13
ROX1YPR065W CBF5P33322 483 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
ROX1YPR065W CTM1P38818 585 aa1.73□□□□□ -2.13
ROX1YPR065W CHL4P38907 458 aa1.73□□□□□ -2.13
ROX1YPR065W DSE1P40077 573 aa1.73□□□□□ -2.13
ROX1YPR065W PCL7P40186 285 aa1.73□□□□□ -2.13
ROX1YPR065W INA22P40576 216 aa1.73□□□□□ -2.13
ROX1YPR065W DBP6P53734 629 aaKnown RBP1.73□□□□□ -2.13
ROX1YPR065W YMR111CQ04461 462 aaPredicted RBP1.73□□□□□ -2.13
ROX1YPR065W CUR1Q06469 252 aa1.73□□□□□ -2.13
ROX1YPR065W UTP23Q12339 254 aaKnown RBP1.73□□□□□ -2.13
ROX1YPR065W PAA1Q12447 191 aaKnown RBP1.73□□□□□ -2.13
ROX1YPR065W RAX2Q12465 1220 aa1.73□□□□□ -2.13
ROX1YPR065W PRM4Q12498 284 aa1.73□□□□□ -2.13
ROX1YPR065W DCP1Q12517 231 aaPredicted RBP1.73□□□□□ -2.13
ROX1YPR065W YIL002W-AQ3E7Z5 69 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms