RNA–Protein interactions for RNA: YPL260W

YPL260W, Transcript of Putative substrate of cAMP-dependent protein kinase (PKA), yeast

Gene YPL260W, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL260W	YPL260W	LSM5	P40089	93 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	COG3	P40094	801 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	CHA4	P43634	648 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	BIT61	P47041	543 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	ASN2	P49090	572 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	PHB2	P50085	310 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	COG7	P53195	279 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	TIM21	P53220	239 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	YGR127W	P53275	312 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	SYF2	P53277	215 aa	Predicted RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	YGR151C	P53287	111 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	ERV25	P54837	211 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	YDR366C	P87287	132 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	ARG5,6	Q01217	863 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	MET14	Q02196	202 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	TRM44	Q02648	567 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	RSM10	Q03201	203 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	EKI1	Q03764	534 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	AIM32	Q04689	311 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	ANT1	Q06497	328 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	BUD20	Q08004	166 aa	Predicted RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
YPL260W	YPL260W	TPO4	Q12256	659 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	TFC7	Q12415	435 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	WIP1	Q2V2P8	89 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	YGR161W-C	Q3E744	92 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	FSH3	Q99369	266 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	THP2	O13539	261 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	ADH3	P07246	375 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	CDC34	P14682	295 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	PDA1	P16387	420 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	GEX1	P25596	615 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	STE14	P32584	239 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	SFC1	P33303	322 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	LOT5	P34234	306 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	TSA1	P34760	196 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	YPT53	P36019	220 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	YKL075C	P36083	450 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	GMH1	P36125	273 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	MRPL28	P36527	147 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	RIB1	P38066	345 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	ALP1	P38971	573 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	PHO90	P39535	881 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	PAC1	P39946	494 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	SSU1	P41930	458 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	ATG18	P43601	500 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	YAR1	P46683	200 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	YGL159W	P53110	370 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	MPC1	P53157	130 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	YNR066C	P53752	436 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	ALG11	P53954	548 aa	Known RBP	4.16	□□□□□ -1.74
YPL260W	YPL260W	AAT1	Q01802	451 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	GRX5	Q02784	150 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	STD1	Q02794	444 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	YPL080C	Q02826	108 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	CRT10	Q08226	957 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	YOL131W	Q08270	108 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	SRO7	Q12038	1033 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	VAM3	Q12241	283 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	PRM4	Q12498	284 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	MHF2	Q3E829	80 aa		4.16	□□□□□ -1.74
YPL260W	YPL260W	YFL068W	P0CX99	160 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	YLL066W-A	P0CY00	160 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	YLL067W-A	P0CY01	160 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	ERD1	P16151	362 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	RPB3	P16370	318 aa	Known RBP	4.15	□□□□□ -1.75
YPL260W	YPL260W	ZRC1	P20107	442 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	KIN82	P25341	720 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	BOS1	P25385	244 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	ARP2	P32381	391 aa	Known RBP	4.15	□□□□□ -1.75
YPL260W	YPL260W	ERG1	P32476	496 aa	Known RBP	4.15	□□□□□ -1.75
YPL260W	YPL260W	YOX1	P34161	385 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	SRY1	P36007	326 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	YBR053C	P38235	358 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	YPC1	P38298	316 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	MDM31	P38880	579 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	YIL161W	P40449	235 aa	Known RBP	4.15	□□□□□ -1.75
YPL260W	YPL260W	BMT5	P40493	336 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	LCB2	P40970	561 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	PMT6	P42934	759 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	CIT3	P43635	486 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	GWT1	P47026	490 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	TAD2	P47058	250 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	ASN1	P49089	572 aa	Known RBP	4.15	□□□□□ -1.75
YPL260W	YPL260W	AVT4	P50944	713 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	COS10	P52924	374 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	GPG1	P53130	126 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	RPN14	P53196	417 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	NRK1	P53915	240 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	GPI15	P53961	229 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	CYT2	Q00873	224 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	ROD1	Q02805	837 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	SNO1	Q03144	224 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	YAP6	Q03935	383 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	SEN15	Q04675	128 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	RNH202	Q05635	350 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	MMT2	Q08970	484 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	NYV1	Q12255	253 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	NDJ1	Q12366	352 aa		4.15	□□□□□ -1.75
YPL260W	YPL260W	CTF3	Q12748	733 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms