RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W RVS161P25343 265 aaKnown RBP2.07□□□□□ -2.08
VPS16YPL045W DCC1P25559 380 aa2.07□□□□□ -2.08
VPS16YPL045W ATS1P31386 333 aa2.07□□□□□ -2.08
VPS16YPL045W PHA2P32452 334 aa2.07□□□□□ -2.08
VPS16YPL045W NDC1P32500 655 aa2.07□□□□□ -2.08
VPS16YPL045W DTR1P38125 572 aa2.07□□□□□ -2.08
VPS16YPL045W RIB5P38145 238 aa2.07□□□□□ -2.08
VPS16YPL045W MTC4P38335 694 aaKnown RBP2.07□□□□□ -2.08
VPS16YPL045W TCD1P38756 429 aa2.07□□□□□ -2.08
VPS16YPL045W DIM1P41819 318 aaKnown RBP2.07□□□□□ -2.08
VPS16YPL045W YFL040WP43562 540 aa2.07□□□□□ -2.08
VPS16YPL045W AIM24P47127 394 aa2.07□□□□□ -2.08
VPS16YPL045W TRF5P48561 642 aaKnown RBP2.07□□□□□ -2.08
VPS16YPL045W SEH1P53011 349 aaKnown RBP2.07□□□□□ -2.08
VPS16YPL045W KAP114P53067 1004 aa2.07□□□□□ -2.08
VPS16YPL045W YPL080CQ02826 108 aa2.07□□□□□ -2.08
VPS16YPL045W RTT103Q05543 409 aa2.07□□□□□ -2.08
VPS16YPL045W SSK22P25390 1331 aaPredicted RBP2.07□□□□□ -2.08
VPS16YPL045W SNF2P22082 1703 aa2.06□□□□□ -2.08
VPS16YPL045W QCR6P00127 147 aa2.06□□□□□ -2.08
VPS16YPL045W ADH2P00331 348 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W RAD3P06839 778 aa2.06□□□□□ -2.08
VPS16YPL045W ERG9P29704 444 aa2.06□□□□□ -2.08
VPS16YPL045W MIX23P38162 196 aa2.06□□□□□ -2.08
VPS16YPL045W SMF2P38778 549 aa2.06□□□□□ -2.08
VPS16YPL045W YPT35P38815 214 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W YHR182WP38870 785 aa2.06□□□□□ -2.08
VPS16YPL045W AIM10P39965 576 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W FMC1P40491 155 aa2.06□□□□□ -2.08
VPS16YPL045W YIR016WP40572 265 aa2.06□□□□□ -2.08
VPS16YPL045W PSA1P41940 361 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W AGP3P43548 558 aa2.06□□□□□ -2.08
VPS16YPL045W MRX5P47007 382 aa2.06□□□□□ -2.08
VPS16YPL045W MDV1P47025 714 aa2.06□□□□□ -2.08
VPS16YPL045W DIG1Q03063 452 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W ALE1Q08548 619 aa2.06□□□□□ -2.08
VPS16YPL045W SAL1D6W196 494 aa2.06□□□□□ -2.08
VPS16YPL045W YSR3P23501 404 aa2.06□□□□□ -2.08
VPS16YPL045W YCR016WP25617 290 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W GCG1P32656 232 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W TRS65P32893 560 aa2.06□□□□□ -2.08
VPS16YPL045W BMH2P34730 273 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
VPS16YPL045W ALD5P40047 520 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W ALG8P40351 577 aa2.06□□□□□ -2.08
VPS16YPL045W OST1P41543 476 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W YGR210CP42942 411 aa2.06□□□□□ -2.08
VPS16YPL045W CTK3P46963 296 aaPredicted RBP2.06□□□□□ -2.08
VPS16YPL045W RTT101P47050 842 aa2.06□□□□□ -2.08
VPS16YPL045W KEL2P50090 882 aa2.06□□□□□ -2.08
VPS16YPL045W TRM112P53738 135 aaPredicted RBP2.06□□□□□ -2.08
VPS16YPL045W CAF40P53829 373 aa2.06□□□□□ -2.08
VPS16YPL045W SED5Q01590 340 aa2.06□□□□□ -2.08
VPS16YPL045W IRC4Q03036 179 aa2.06□□□□□ -2.08
VPS16YPL045W YMR209CQ03648 457 aa2.06□□□□□ -2.08
VPS16YPL045W HCR1Q05775 265 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W ATG38Q05789 226 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W GMC2Q06201 188 aa2.06□□□□□ -2.08
VPS16YPL045W YPR172WQ06608 200 aa2.06□□□□□ -2.08
VPS16YPL045W CMS1Q07897 291 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W YPQ1Q12010 308 aa2.06□□□□□ -2.08
VPS16YPL045W RGT2Q12300 763 aa2.06□□□□□ -2.08
VPS16YPL045W GIS3Q12418 502 aa2.06□□□□□ -2.08
VPS16YPL045W ADE6P38972 1358 aaKnown RBP2.06□□□□□ -2.08
VPS16YPL045W ATP6P00854 259 aa2.05□□□□□ -2.08
VPS16YPL045W ATR1P13090 542 aa2.05□□□□□ -2.08
VPS16YPL045W MTF1P14908 341 aaKnown RBP2.05□□□□□ -2.08
VPS16YPL045W POP5P28005 173 aa2.05□□□□□ -2.08
VPS16YPL045W PEX2P32800 271 aa2.05□□□□□ -2.08
VPS16YPL045W CBF5P33322 483 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
VPS16YPL045W PMU1P36069 295 aa2.05□□□□□ -2.08
VPS16YPL045W FHL1P39521 936 aa2.05□□□□□ -2.08
VPS16YPL045W XBP1P40489 647 aa2.05□□□□□ -2.08
VPS16YPL045W YJR030CP47101 745 aa2.05□□□□□ -2.08
VPS16YPL045W GOR1P53839 350 aa2.05□□□□□ -2.08
VPS16YPL045W BER1Q06688 274 aaKnown RBP2.05□□□□□ -2.08
VPS16YPL045W MDM36Q06820 579 aa2.05□□□□□ -2.08
VPS16YPL045W AYT1Q12226 474 aa2.05□□□□□ -2.08
VPS16YPL045W YOR029WQ12243 111 aa2.05□□□□□ -2.08
VPS16YPL045W MHP1P43638 1398 aa2.05□□□□□ -2.08
VPS16YPL045W MRPL25P23369 157 aa2.05□□□□□ -2.08
VPS16YPL045W RNA14P25298 677 aaKnown RBP2.05□□□□□ -2.08
VPS16YPL045W RBK1P25332 333 aa2.05□□□□□ -2.08
VPS16YPL045W RRT12P25381 491 aa2.05□□□□□ -2.08
VPS16YPL045W ITR2P30606 609 aa2.05□□□□□ -2.08
VPS16YPL045W PRO3P32263 286 aaKnown RBP2.05□□□□□ -2.08
VPS16YPL045W KRE6P32486 720 aa2.05□□□□□ -2.08
VPS16YPL045W ZRT1P32804 376 aa2.05□□□□□ -2.08
VPS16YPL045W CYM1P32898 989 aa2.05□□□□□ -2.08
VPS16YPL045W SWD2P36104 329 aaPredicted RBP2.05□□□□□ -2.08
VPS16YPL045W NAT2P37293 288 aa2.05□□□□□ -2.08
VPS16YPL045W YIL152WP40455 235 aa2.05□□□□□ -2.08
VPS16YPL045W RPR2P40571 144 aa2.05□□□□□ -2.08
VPS16YPL045W TES1P41903 349 aaKnown RBP2.05□□□□□ -2.08
VPS16YPL045W OTU1P43558 301 aa2.05□□□□□ -2.08
VPS16YPL045W PGA2P53903 129 aa2.05□□□□□ -2.08
VPS16YPL045W RIM13Q03792 727 aa2.05□□□□□ -2.08
VPS16YPL045W APC9Q12107 265 aa2.05□□□□□ -2.08
VPS16YPL045W ERP3Q12403 225 aa2.05□□□□□ -2.08
VPS16YPL045W YCR024C-BQ3E7Z8 88 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 227.4 ms