RNA–Protein interactions for RNA: YOR006C

TSR3, Transcript of Protein required for 20S pre-rRNA processing, yeast

Gene TSR3, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR3	YOR006C	TMS1	Q12116	473 aa		5.78	□□□□□ -1.48
TSR3	YOR006C	YKL018C-A	Q3E7A7	99 aa		5.78	□□□□□ -1.48
TSR3	YOR006C	CYR1	P08678	2026 aa	Known RBP	5.77	□□□□□ -1.49
TSR3	YOR006C	RPL7A	P05737	244 aa	Known RBP	5.77	□□□□□ -1.49
TSR3	YOR006C	CSM1	P25651	190 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	CNE1	P27825	502 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	KRE6	P32486	720 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	RPN2	P32565	945 aa	Known RBP	5.77	□□□□□ -1.49
TSR3	YOR006C	SWH1	P35845	1188 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	RSM22	P36056	628 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	FLO10	P36170	1169 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	FES1	P38260	290 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	STP2	P38704	541 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	GCN20	P43535	752 aa	Known RBP	5.77	□□□□□ -1.49
TSR3	YOR006C	ALB1	P47019	175 aa	Predicted RBP	5.77	□□□□□ -1.49
TSR3	YOR006C	YJL055W	P47044	245 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	USE1	P53146	245 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	CDH1	P53197	566 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	YGR067C	P53243	804 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	COG2	P53271	262 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	COQ11	Q05892	277 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	CYK3	Q07533	885 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	YOR365C	Q08844	703 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	RPL7B	Q12213	244 aa	Known RBP	5.77	□□□□□ -1.49
TSR3	YOR006C	SKS1	Q12505	502 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	PAR32	Q12515	295 aa	Known RBP	5.77	□□□□□ -1.49
TSR3	YOR006C	ADF1	Q2V2Q1	113 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	YOL087C	Q99247	1116 aa		5.77	□□□□□ -1.49
TSR3	YOR006C	THP2	O13539	261 aa	Known RBP	5.76	□□□□□ -1.49
TSR3	YOR006C	RAP1	P11938	827 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	GPI12	P23797	304 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	SSE1	P32589	693 aa	Known RBP	5.76	□□□□□ -1.49
TSR3	YOR006C	YPT53	P36019	220 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	YBR139W	P38109	508 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	IST2	P38250	946 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	GDT1	P38301	280 aa	Predicted RBP	5.76	□□□□□ -1.49
TSR3	YOR006C	TSC10	P38342	320 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	AIM10	P39965	576 aa	Known RBP	5.76	□□□□□ -1.49
TSR3	YOR006C	TPA1	P40032	644 aa	Known RBP	5.76	□□□□□ -1.49
TSR3	YOR006C	YJL068C	P40363	299 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	PHB1	P40961	287 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	MDV1	P47025	714 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	DIA3	P52290	468 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	YGL117W	P53133	265 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	CGR1	P53188	120 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	YDR476C	Q03362	224 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	HSP31	Q04432	237 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	YMR310C	Q04867	317 aa	Predicted RBP	5.76	□□□□□ -1.49
TSR3	YOR006C	GTB1	Q04924	702 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	DYN3	Q04949	312 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	YOL131W	Q08270	108 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	YPR202W	Q08993	238 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	ULA1	Q12059	462 aa		5.76	□□□□□ -1.49
TSR3	YOR006C	LSO2	Q3E772	92 aa	Known RBP	5.76	□□□□□ -1.49
TSR3	YOR006C	ATP6	P00854	259 aa		5.75	□□□□□ -1.49
TSR3	YOR006C	ZWF1	P11412	505 aa	Known RBP	5.75	□□□□□ -1.49
TSR3	YOR006C	AAC3	P18238	307 aa		5.75	□□□□□ -1.49
TSR3	YOR006C	YCL049C	P25577	312 aa		5.75	□□□□□ -1.49
TSR3	YOR006C	ATP7	P30902	174 aa		5.75	□□□□□ -1.49
TSR3	YOR006C	ASF2	P32448	525 aa	Predicted RBP	5.75	□□□□□ -1.49
TSR3	YOR006C	ROT2	P38138	954 aa		5.75	□□□□□ -1.49
TSR3	YOR006C	SNO3	P43544	222 aa		5.75	□□□□□ -1.49
TSR3	YOR006C	IRC6	P43615	237 aa		5.75	□□□□□ -1.49
TSR3	YOR006C	LSG1	P53145	640 aa	Known RBP	5.75	□□□□□ -1.49
TSR3	YOR006C	SMA2	Q04658	369 aa		5.75	□□□□□ -1.49
TSR3	YOR006C	MUM3	Q08750	479 aa		5.75	□□□□□ -1.49
TSR3	YOR006C	YNL162W-A	Q3E7A8	72 aa		5.75	□□□□□ -1.49
TSR3	YOR006C	SLH1	P53327	1967 aa	Known RBP	5.75	□□□□□ -1.49
TSR3	YOR006C	RPL20A	P0CX23	172 aa	Known RBP	5.74	□□□□□ -1.49
TSR3	YOR006C	RPL20B	P0CX24	172 aa	Predicted RBP	5.74	□□□□□ -1.49
TSR3	YOR006C	TRM5	P38793	499 aa		5.74	□□□□□ -1.49
TSR3	YOR006C	YHR177W	P38867	453 aa		5.74	□□□□□ -1.49
TSR3	YOR006C	MNN9	P39107	395 aa	Known RBP	5.74	□□□□□ -1.49
TSR3	YOR006C	HPM1	P40481	377 aa		5.74	□□□□□ -1.49
TSR3	YOR006C	CIN1	P40987	1014 aa		5.74	□□□□□ -1.49
TSR3	YOR006C	AAD10	P47182	288 aa		5.74	□□□□□ -1.49
TSR3	YOR006C	TOM22	P49334	152 aa		5.74	□□□□□ -1.49
TSR3	YOR006C	YLR460C	P54007	376 aa		5.74	□□□□□ -1.49
TSR3	YOR006C	YOR342C	Q12182	319 aa		5.74	□□□□□ -1.49
TSR3	YOR006C	PRP46	Q12417	451 aa	Predicted RBP	5.74	□□□□□ -1.49
TSR3	YOR006C	YOR032W-A	Q8TGS1	66 aa		5.74	□□□□□ -1.49
TSR3	YOR006C	FAS1	P07149	2051 aa	Known RBP	5.74	□□□□□ -1.49
TSR3	YOR006C	GCN1	P33892	2672 aa	Known RBP	5.73	□□□□□ -1.49
TSR3	YOR006C	YBR056W-A	I2HB52	66 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	DBP3	P20447	523 aa	Known RBP	5.73	□□□□□ -1.49
TSR3	YOR006C	CTR86	P25355	563 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	STP22	P25604	385 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	MKK1	P32490	508 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	ZTA1	P38230	334 aa	Known RBP	5.73	□□□□□ -1.49
TSR3	YOR006C	MED8	P38304	223 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	OM14	P38325	134 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	RCK1	P38622	512 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	LAS21	P40367	830 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	MIG2	P53035	382 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	TPC1	P53257	314 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	GTR1	Q00582	310 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	YML122C	Q03207	126 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	YDR209C	Q03480	137 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	SPC24	Q04477	213 aa		5.73	□□□□□ -1.49
TSR3	YOR006C	BCP1	Q06338	283 aa		5.73	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms