RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPG4	YMR107W	YHC3	P47040	408 aa		4.94	□□□□□ -1.62
SPG4	YMR107W	IBA57	P47158	497 aa		4.94	□□□□□ -1.62
SPG4	YMR107W	MCM22	P47167	239 aa		4.94	□□□□□ -1.62
SPG4	YMR107W	VPS62	P53285	467 aa		4.94	□□□□□ -1.62
SPG4	YMR107W	ERV25	P54837	211 aa	Known RBP	4.94	□□□□□ -1.62
SPG4	YMR107W	HAS1	Q03532	505 aa	Known RBP	4.94	□□□□□ -1.62
SPG4	YMR107W	TDA1	Q03533	586 aa		4.94	□□□□□ -1.62
SPG4	YMR107W	OST6	Q03723	332 aa		4.94	□□□□□ -1.62
SPG4	YMR107W	YPR127W	Q06494	345 aa		4.94	□□□□□ -1.62
SPG4	YMR107W	MMT2	Q08970	484 aa		4.94	□□□□□ -1.62
SPG4	YMR107W	RAD28	Q12021	506 aa		4.94	□□□□□ -1.62
SPG4	YMR107W	YDR056C	Q12025	205 aa		4.94	□□□□□ -1.62
SPG4	YMR107W	SFM1	Q12314	213 aa		4.94	□□□□□ -1.62
SPG4	YMR107W	TY1A-NL1	Q12391	440 aa	Known RBP	4.94	□□□□□ -1.62
SPG4	YMR107W	YKL033W-A	Q86ZR7	236 aa		4.94	□□□□□ -1.62
SPG4	YMR107W	PNO1	Q99216	274 aa	Known RBP	4.94	□□□□□ -1.62
SPG4	YMR107W	SCEI	P03882	235 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	CDC9	P04819	755 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	PEP4	P07267	405 aa	Known RBP	4.93	□□□□□ -1.62
SPG4	YMR107W	MSF1	P08425	469 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	RPB3	P16370	318 aa	Known RBP	4.93	□□□□□ -1.62
SPG4	YMR107W	SCL1	P21243	252 aa	Known RBP	4.93	□□□□□ -1.62
SPG4	YMR107W	VMA16	P23968	213 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	YIH1	P25637	258 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	MLF3	P32047	452 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	MRP20	P32387	263 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	SOL2	P37262	315 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	SRO77	P38163	1010 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	FUI1	P38196	639 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	AIM3	P38266	947 aa	Known RBP	4.93	□□□□□ -1.62
SPG4	YMR107W	MTC4	P38335	694 aa	Known RBP	4.93	□□□□□ -1.62
SPG4	YMR107W	DED81	P38707	554 aa	Known RBP	4.93	□□□□□ -1.62
SPG4	YMR107W	CTF8	P38877	133 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	DHH1	P39517	506 aa	Known RBP	4.93	□□□□□ -1.62
SPG4	YMR107W	GCV3	P39726	170 aa	Predicted RBP	4.93	□□□□□ -1.62
SPG4	YMR107W	GET2	P40056	285 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	YER158C	P40095	573 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	RGI2	P40188	164 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	AGE2	P40529	298 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	GTS1	P40956	396 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	CDC1	P40986	491 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	ACF4	P47129	309 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	JJJ3	P47138	172 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	MRX6	P48564	524 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	LYS5	P50113	272 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	GPG1	P53130	126 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	TYW3	P53177	273 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	RSM27	P53305	110 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	FMP41	P53889	259 aa	Known RBP	4.93	□□□□□ -1.62
SPG4	YMR107W	YML083C	Q04526	418 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	YMR253C	Q04835	414 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	CIA1	Q05583	330 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	AAD4	Q07747	329 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	YIL002W-A	Q3E7Z5	69 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	Q0182	Q9ZZW1	134 aa		4.93	□□□□□ -1.62
SPG4	YMR107W	QCR7	P00128	127 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	AI3	P03877	415 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	PRB1	P09232	635 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	YOL163W	P0CF20	169 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	HOM3	P10869	527 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	GLK1	P17709	500 aa	Known RBP	4.92	□□□□□ -1.62
SPG4	YMR107W	FUR1	P18562	216 aa	Known RBP	4.92	□□□□□ -1.62
SPG4	YMR107W	STE50	P25344	346 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	NAM9	P27929	486 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	ATS1	P31386	333 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	RPD3	P32561	433 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	VPH1	P32563	840 aa	Known RBP	4.92	□□□□□ -1.62
SPG4	YMR107W	YEF1	P32622	495 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	AFR1	P33304	620 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	MSN4	P33749	630 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	DOA1	P36037	715 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	ALG3	P38179	458 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	YBR071W	P38243	211 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	RMD6	P39975	231 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	LSM5	P40089	93 aa	Known RBP	4.92	□□□□□ -1.62
SPG4	YMR107W	YTA6	P40328	754 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	RFC4	P40339	323 aa	Known RBP	4.92	□□□□□ -1.62
SPG4	YMR107W	POG1	P40473	351 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	BMT5	P40493	336 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	UTP25	P40498	721 aa	Known RBP	4.92	□□□□□ -1.62
SPG4	YMR107W	IST3	P40565	148 aa	Predicted RBP	4.92	□□□□□ -1.62
SPG4	YMR107W	CAT5	P41735	233 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	MRPS18	P42847	217 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	RMD8	P43620	662 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	NIT3	P49954	291 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	MUP1	P50276	574 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	SOL1	P50278	321 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	OCA1	P50946	238 aa	Predicted RBP	4.92	□□□□□ -1.62
SPG4	YMR107W	SEH1	P53011	349 aa	Known RBP	4.92	□□□□□ -1.62
SPG4	YMR107W	PKP2	P53170	491 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	SAY1	P53324	424 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	BUD17	P53727	317 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	ELA1	P53861	379 aa	Predicted RBP	4.92	□□□□□ -1.62
SPG4	YMR107W	YKR011C	Q02209	353 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	CTK1	Q03957	528 aa	Known RBP	4.92	□□□□□ -1.62
SPG4	YMR107W	SEN15	Q04675	128 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	YMR252C	Q04814	134 aa		4.92	□□□□□ -1.62
SPG4	YMR107W	HBT1	Q07653	1046 aa	Known RBP	4.92	□□□□□ -1.62
SPG4	YMR107W	PML1	Q07930	204 aa	Predicted RBP	4.92	□□□□□ -1.62
SPG4	YMR107W	IRC10	Q08118	586 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 72.5 ms