RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C YOR365CQ08844 703 aa5.12□□□□□ -1.59
VPS1YKR001C SLF1Q12034 447 aaKnown RBP5.12□□□□□ -1.59
VPS1YKR001C ATP14Q12349 124 aa5.12□□□□□ -1.59
VPS1YKR001C TSC13Q99190 310 aa5.12□□□□□ -1.59
VPS1YKR001C GAC1P28006 793 aa5.12□□□□□ -1.59
VPS1YKR001C SRP14P38985 146 aa5.12□□□□□ -1.59
VPS1YKR001C PSD1P39006 500 aa5.12□□□□□ -1.59
VPS1YKR001C YEL020CP39994 560 aa5.12□□□□□ -1.59
VPS1YKR001C MRX5P47007 382 aa5.12□□□□□ -1.59
VPS1YKR001C AIM22P47051 409 aa5.12□□□□□ -1.59
VPS1YKR001C GPI14P47088 403 aaKnown RBP5.12□□□□□ -1.59
VPS1YKR001C CTF18P49956 741 aa5.12□□□□□ -1.59
VPS1YKR001C YTP1P53584 459 aa5.12□□□□□ -1.59
VPS1YKR001C TEP1P53916 434 aa5.12□□□□□ -1.59
VPS1YKR001C ACT1P60010 375 aaKnown RBP5.12□□□□□ -1.59
VPS1YKR001C YPL014WQ02606 381 aa5.12□□□□□ -1.59
VPS1YKR001C ADI1Q03677 179 aa5.12□□□□□ -1.59
VPS1YKR001C RKM2Q03942 479 aa5.12□□□□□ -1.59
VPS1YKR001C PEX10Q05568 337 aa5.12□□□□□ -1.59
VPS1YKR001C YPS7Q06325 596 aa5.12□□□□□ -1.59
VPS1YKR001C SRL2Q12020 392 aa5.12□□□□□ -1.59
VPS1YKR001C POM33Q12164 279 aa5.12□□□□□ -1.59
VPS1YKR001C CMR1Q12510 522 aaKnown RBP5.12□□□□□ -1.59
VPS1YKR001C SPO7P18410 259 aa5.11□□□□□ -1.59
VPS1YKR001C FPR1P20081 114 aaKnown RBP5.11□□□□□ -1.59
VPS1YKR001C NUP1P20676 1076 aa5.11□□□□□ -1.59
VPS1YKR001C IDP1P21954 428 aaKnown RBP5.11□□□□□ -1.59
VPS1YKR001C CPR2P23285 205 aa5.11□□□□□ -1.59
VPS1YKR001C ERG6P25087 383 aaKnown RBP5.11□□□□□ -1.59
VPS1YKR001C MDH3P32419 343 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
VPS1YKR001C UGX2P32772 223 aa5.11□□□□□ -1.59
VPS1YKR001C BNA4P38169 460 aa5.11□□□□□ -1.59
VPS1YKR001C YPT31P38555 223 aaKnown RBP5.11□□□□□ -1.59
VPS1YKR001C DHH1P39517 506 aaKnown RBP5.11□□□□□ -1.59
VPS1YKR001C EXO1P39875 702 aa5.11□□□□□ -1.59
VPS1YKR001C ERG28P40030 148 aa5.11□□□□□ -1.59
VPS1YKR001C YIL108WP40483 696 aaKnown RBP5.11□□□□□ -1.59
VPS1YKR001C CDC40P40968 455 aaPredicted RBP5.11□□□□□ -1.59
VPS1YKR001C BAP3P41815 604 aa5.11□□□□□ -1.59
VPS1YKR001C GUF1P46943 645 aa5.11□□□□□ -1.59
VPS1YKR001C MOG1P47123 218 aa5.11□□□□□ -1.59
VPS1YKR001C PPT1P53043 513 aa5.11□□□□□ -1.59
VPS1YKR001C VPS75P53853 264 aa5.11□□□□□ -1.59
VPS1YKR001C YNL184CP53876 108 aa5.11□□□□□ -1.59
VPS1YKR001C NAT4Q04751 285 aa5.11□□□□□ -1.59
VPS1YKR001C HPF1Q05164 967 aa5.11□□□□□ -1.59
VPS1YKR001C YPR014CQ6B0W2 109 aa5.11□□□□□ -1.59
VPS1YKR001C CWP1P28319 239 aa5.11□□□□□ -1.59
VPS1YKR001C MRPL9P31334 269 aa5.11□□□□□ -1.59
VPS1YKR001C RNP1P32385 249 aa5.11□□□□□ -1.59
VPS1YKR001C SRB5P32585 307 aa5.11□□□□□ -1.59
VPS1YKR001C ECT1P33412 323 aa5.11□□□□□ -1.59
VPS1YKR001C ERV15P38312 142 aa5.11□□□□□ -1.59
VPS1YKR001C DSE1P40077 573 aa5.11□□□□□ -1.59
VPS1YKR001C YPT11P48559 417 aa5.11□□□□□ -1.59
VPS1YKR001C YPR003CP53394 754 aa5.11□□□□□ -1.59
VPS1YKR001C YNL143CP53908 130 aa5.11□□□□□ -1.59
VPS1YKR001C ODC1Q03028 310 aa5.11□□□□□ -1.59
VPS1YKR001C CTL1Q03220 320 aaKnown RBP5.11□□□□□ -1.59
VPS1YKR001C TPP1Q03796 238 aa5.11□□□□□ -1.59
VPS1YKR001C GMC1Q04399 608 aa5.11□□□□□ -1.59
VPS1YKR001C BER1Q06688 274 aaKnown RBP5.11□□□□□ -1.59
VPS1YKR001C XYL2Q07993 356 aa5.11□□□□□ -1.59
VPS1YKR001C NRT1Q08485 598 aa5.11□□□□□ -1.59
VPS1YKR001C IRA1P18963 3092 aa5.1□□□□□ -1.59
VPS1YKR001C GRX2P17695 143 aaKnown RBP5.1□□□□□ -1.59
VPS1YKR001C ERV1P27882 189 aa5.1□□□□□ -1.59
VPS1YKR001C MUD1P32605 298 aaKnown RBP5.1□□□□□ -1.59
VPS1YKR001C DUT1P33317 147 aa5.1□□□□□ -1.59
VPS1YKR001C PRP18P33411 251 aaPredicted RBP5.1□□□□□ -1.59
VPS1YKR001C PHD1P36093 366 aa5.1□□□□□ -1.59
VPS1YKR001C TUL1P36096 758 aa5.1□□□□□ -1.59
VPS1YKR001C YBR139WP38109 508 aa5.1□□□□□ -1.59
VPS1YKR001C EXO5P38289 585 aa5.1□□□□□ -1.59
VPS1YKR001C SMF1P38925 575 aa5.1□□□□□ -1.59
VPS1YKR001C LCP5P40079 357 aaPredicted RBP5.1□□□□□ -1.59
VPS1YKR001C PGD1P40356 397 aa5.1□□□□□ -1.59
VPS1YKR001C YIR007WP40566 764 aa5.1□□□□□ -1.59
VPS1YKR001C EFM3P47163 339 aa5.1□□□□□ -1.59
VPS1YKR001C YNR066CP53752 436 aa5.1□□□□□ -1.59
VPS1YKR001C HXT11P54862 567 aa5.1□□□□□ -1.59
VPS1YKR001C SMA2Q04658 369 aa5.1□□□□□ -1.59
VPS1YKR001C TPO3Q06451 622 aa5.1□□□□□ -1.59
VPS1YKR001C SYT1Q06836 1226 aa5.1□□□□□ -1.59
VPS1YKR001C IZH3Q07959 543 aa5.1□□□□□ -1.59
VPS1YKR001C SVS1Q12254 260 aa5.1□□□□□ -1.59
VPS1YKR001C YCL012CQ8J0M4 134 aa5.1□□□□□ -1.59
VPS1YKR001C ECM3Q99252 613 aa5.1□□□□□ -1.59
VPS1YKR001C RHO1P06780 209 aaKnown RBP5.09□□□□□ -1.59
VPS1YKR001C PPR1P07272 904 aaPredicted RBP5.09□□□□□ -1.59
VPS1YKR001C HEM13P11353 328 aaKnown RBP5.09□□□□□ -1.59
VPS1YKR001C MSN1P22148 382 aa5.09□□□□□ -1.59
VPS1YKR001C RPS1BP23248 255 aaKnown RBP5.09□□□□□ -1.59
VPS1YKR001C MEK1P24719 497 aaPredicted RBP5.09□□□□□ -1.59
VPS1YKR001C AEP1P32493 518 aa5.09□□□□□ -1.59
VPS1YKR001C RPC25P35718 212 aa5.09□□□□□ -1.59
VPS1YKR001C YNK1P36010 153 aaKnown RBP5.09□□□□□ -1.59
VPS1YKR001C RIB1P38066 345 aa5.09□□□□□ -1.59
VPS1YKR001C TCM62P38228 572 aaKnown RBP5.09□□□□□ -1.59
VPS1YKR001C PRS3P38689 320 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms