RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W MKK1P32490 508 aa1.8□□□□□ -2.12
CIC1YHR052W MRPS5P33759 307 aa1.8□□□□□ -2.12
CIC1YHR052W RCK1P38622 512 aa1.8□□□□□ -2.12
CIC1YHR052W GDI1P39958 451 aaKnown RBP1.8□□□□□ -2.12
CIC1YHR052W ASG7P46993 209 aa1.8□□□□□ -2.12
CIC1YHR052W SGT2Q12118 346 aaKnown RBP1.8□□□□□ -2.12
CIC1YHR052W DAL81P21657 970 aa1.79□□□□□ -2.12
CIC1YHR052W INO2P26798 304 aa1.79□□□□□ -2.12
CIC1YHR052W RFT1P38206 574 aaPredicted RBP1.79□□□□□ -2.12
CIC1YHR052W SMC2P38989 1170 aaKnown RBP1.79□□□□□ -2.12
CIC1YHR052W MIC19P43594 170 aa1.79□□□□□ -2.12
CIC1YHR052W HSH155P49955 971 aaKnown RBP1.79□□□□□ -2.12
CIC1YHR052W SHE4P51534 789 aa1.79□□□□□ -2.12
CIC1YHR052W YGL088WP53151 121 aa1.79□□□□□ -2.12
CIC1YHR052W YPL113CQ02961 396 aa1.79□□□□□ -2.12
CIC1YHR052W CSI1Q04368 295 aa1.79□□□□□ -2.12
CIC1YHR052W NAT4Q04751 285 aa1.79□□□□□ -2.12
CIC1YHR052W SPH1Q06160 661 aa1.79□□□□□ -2.12
CIC1YHR052W RPL6BP05739 176 aaKnown RBP1.78□□□□□ -2.12
CIC1YHR052W ERG9P29704 444 aa1.78□□□□□ -2.12
CIC1YHR052W FAA1P30624 700 aaKnown RBP1.78□□□□□ -2.12
CIC1YHR052W SEC28P40509 296 aaKnown RBP1.78□□□□□ -2.12
CIC1YHR052W YIL054WP40524 105 aa1.78□□□□□ -2.12
CIC1YHR052W CAX4P53223 239 aa1.78□□□□□ -2.12
CIC1YHR052W FMP48P53233 369 aa1.78□□□□□ -2.12
CIC1YHR052W RSC1P53236 928 aa1.78□□□□□ -2.12
CIC1YHR052W TPC1P53257 314 aa1.78□□□□□ -2.12
CIC1YHR052W YNR068CP53754 272 aa1.78□□□□□ -2.12
CIC1YHR052W RPL6AQ02326 176 aaKnown RBP1.78□□□□□ -2.12
CIC1YHR052W ARR1Q06596 294 aa1.78□□□□□ -2.12
CIC1YHR052W APC5Q08683 685 aa1.78□□□□□ -2.12
CIC1YHR052W YPL264CQ08980 353 aa1.78□□□□□ -2.12
CIC1YHR052W YPR063CQ12160 140 aa1.78□□□□□ -2.12
CIC1YHR052W SFG1Q12507 346 aa1.78□□□□□ -2.12
CIC1YHR052W TFB5Q3E7C1 72 aaPredicted RBP1.78□□□□□ -2.12
CIC1YHR052W MAS1P10507 462 aa1.77□□□□□ -2.13
CIC1YHR052W CTA1P15202 515 aa1.77□□□□□ -2.13
CIC1YHR052W UTR1P21373 530 aa1.77□□□□□ -2.13
CIC1YHR052W MXR2P25566 168 aa1.77□□□□□ -2.13
CIC1YHR052W ITR2P30606 609 aa1.77□□□□□ -2.13
CIC1YHR052W PUP2P32379 260 aa1.77□□□□□ -2.13
CIC1YHR052W YKL187CP34231 750 aa1.77□□□□□ -2.13
CIC1YHR052W YSW1P38280 609 aa1.77□□□□□ -2.13
CIC1YHR052W GDT1P38301 280 aaPredicted RBP1.77□□□□□ -2.13
CIC1YHR052W MED8P38304 223 aa1.77□□□□□ -2.13
CIC1YHR052W YHC3P47040 408 aa1.77□□□□□ -2.13
CIC1YHR052W MHP1P43638 1398 aa1.76□□□□□ -2.13
CIC1YHR052W TDH2P00358 332 aaKnown RBP1.76□□□□□ -2.13
CIC1YHR052W TDH3P00359 332 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
CIC1YHR052W RAD1P06777 1100 aa1.76□□□□□ -2.13
CIC1YHR052W THR4P16120 514 aaKnown RBP1.76□□□□□ -2.13
CIC1YHR052W DAP2P18962 818 aa1.76□□□□□ -2.13
CIC1YHR052W UBA1P22515 1024 aaKnown RBP1.76□□□□□ -2.13
CIC1YHR052W HMX1P32339 317 aa1.76□□□□□ -2.13
CIC1YHR052W SLM1P40485 686 aa1.76□□□□□ -2.13
CIC1YHR052W BUD13P46947 266 aaPredicted RBP1.76□□□□□ -2.13
CIC1YHR052W SDS23P53172 527 aa1.76□□□□□ -2.13
CIC1YHR052W UTP6Q02354 440 aaKnown RBP1.76□□□□□ -2.13
CIC1YHR052W MIX17Q03667 156 aa1.76□□□□□ -2.13
CIC1YHR052W RLP24Q07915 199 aaKnown RBP1.76□□□□□ -2.13
CIC1YHR052W YOR012WQ12351 137 aa1.76□□□□□ -2.13
CIC1YHR052W MET2P08465 486 aa1.75□□□□□ -2.13
CIC1YHR052W PHO84P25297 587 aaKnown RBP1.75□□□□□ -2.13
CIC1YHR052W YHR122WP38829 231 aa1.75□□□□□ -2.13
CIC1YHR052W YGL118CP53132 145 aa1.75□□□□□ -2.13
CIC1YHR052W YDR114CQ04597 100 aa1.75□□□□□ -2.13
CIC1YHR052W YMR310CQ04867 317 aaPredicted RBP1.75□□□□□ -2.13
CIC1YHR052W DXO1Q06349 442 aa1.75□□□□□ -2.13
CIC1YHR052W MIM1Q08176 113 aa1.75□□□□□ -2.13
CIC1YHR052W TRM10Q12400 293 aa1.75□□□□□ -2.13
CIC1YHR052W ARO4P32449 370 aaKnown RBP1.74□□□□□ -2.13
CIC1YHR052W PEX32P38292 413 aa1.74□□□□□ -2.13
CIC1YHR052W SMF2P38778 549 aa1.74□□□□□ -2.13
CIC1YHR052W DSE1P40077 573 aa1.74□□□□□ -2.13
CIC1YHR052W CLP1Q08685 445 aaPredicted RBP1.74□□□□□ -2.13
CIC1YHR052W GLE1Q12315 538 aa1.74□□□□□ -2.13
CIC1YHR052W TFC7Q12415 435 aa1.74□□□□□ -2.13
CIC1YHR052W KRE1P17260 313 aa1.73□□□□□ -2.13
CIC1YHR052W RDS1P25611 832 aa1.73□□□□□ -2.13
CIC1YHR052W IML3P38265 245 aa1.73□□□□□ -2.13
CIC1YHR052W ASP1P38986 381 aaPredicted RBP1.73□□□□□ -2.13
CIC1YHR052W YMR134WP40207 237 aa1.73□□□□□ -2.13
CIC1YHR052W YFR045WP43617 309 aa1.73□□□□□ -2.13
CIC1YHR052W PMT4P46971 762 aa1.73□□□□□ -2.13
CIC1YHR052W ACT1P60010 375 aaKnown RBP1.73□□□□□ -2.13
CIC1YHR052W RGM1Q00453 211 aa1.73□□□□□ -2.13
CIC1YHR052W YPL080CQ02826 108 aa1.73□□□□□ -2.13
CIC1YHR052W REP1P03871 373 aa1.72□□□□□ -2.13
CIC1YHR052W MRPL20P22354 195 aaPredicted RBP1.72□□□□□ -2.13
CIC1YHR052W KTI12P34253 313 aaKnown RBP1.72□□□□□ -2.13
CIC1YHR052W YKR032WP36127 104 aa1.72□□□□□ -2.13
CIC1YHR052W ATG12P38316 186 aa1.72□□□□□ -2.13
CIC1YHR052W MMS21P38632 267 aa1.72□□□□□ -2.13
CIC1YHR052W CTM1P38818 585 aa1.72□□□□□ -2.13
CIC1YHR052W ECO1P43605 281 aa1.72□□□□□ -2.13
CIC1YHR052W YNL040WP53960 456 aaPredicted RBP1.72□□□□□ -2.13
CIC1YHR052W DCC1P25559 380 aa1.71□□□□□ -2.14
CIC1YHR052W ADH5P38113 351 aaKnown RBP1.71□□□□□ -2.14
CIC1YHR052W YGP1P38616 354 aaKnown RBP1.71□□□□□ -2.14
CIC1YHR052W YER084WP40057 128 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms