RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeastyeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMC1YGL006W TY1A-MR1Q04215 440 aa3.96□□□□□ -1.77
PMC1YGL006W TY1A-BLQ12266 440 aa3.96□□□□□ -1.77
PMC1YGL006W MET8P15807 274 aa3.96□□□□□ -1.78
PMC1YGL006W YIM1P28625 365 aa3.96□□□□□ -1.78
PMC1YGL006W CYS3P31373 394 aaKnown RBP3.96□□□□□ -1.78
PMC1YGL006W RIB5P38145 238 aa3.96□□□□□ -1.78
PMC1YGL006W IRC7P43623 340 aa3.96□□□□□ -1.78
PMC1YGL006W EMC4P53073 190 aa3.96□□□□□ -1.78
PMC1YGL006W SDT1P53078 280 aa3.96□□□□□ -1.78
PMC1YGL006W VHT1P53241 593 aa3.96□□□□□ -1.78
PMC1YGL006W RHO4Q00246 291 aa3.96□□□□□ -1.78
PMC1YGL006W CTK1Q03957 528 aaKnown RBP3.96□□□□□ -1.78
PMC1YGL006W PLM2Q04383 521 aa3.96□□□□□ -1.78
PMC1YGL006W GAS2Q06135 555 aa3.96□□□□□ -1.78
PMC1YGL006W CDA2Q06703 312 aa3.96□□□□□ -1.78
PMC1YGL006W YPL272CQ08984 517 aa3.96□□□□□ -1.78
PMC1YGL006W SPC3Q12133 184 aa3.96□□□□□ -1.78
PMC1YGL006W YOR114WQ12219 294 aa3.96□□□□□ -1.78
PMC1YGL006W PEX11Q12462 236 aa3.96□□□□□ -1.78
PMC1YGL006W SFG1Q12507 346 aa3.96□□□□□ -1.78
PMC1YGL006W SLH1P53327 1967 aaKnown RBP3.96□□□□□ -1.78
PMC1YGL006W SWI5P08153 709 aa3.96□□□□□ -1.78
PMC1YGL006W TFS1P14306 219 aa3.96□□□□□ -1.78
PMC1YGL006W PDE1P22434 369 aa3.96□□□□□ -1.78
PMC1YGL006W EXG1P23776 448 aaKnown RBP3.96□□□□□ -1.78
PMC1YGL006W HXT4P32467 576 aa3.96□□□□□ -1.78
PMC1YGL006W YHR177WP38867 453 aa3.96□□□□□ -1.78
PMC1YGL006W BMT5P40493 336 aa3.96□□□□□ -1.78
PMC1YGL006W FAF1P40546 346 aaPredicted RBP3.96□□□□□ -1.78
PMC1YGL006W GTT1P40582 234 aa3.96□□□□□ -1.78
PMC1YGL006W IME4P41833 600 aa3.96□□□□□ -1.78
PMC1YGL006W GLR1P41921 483 aaKnown RBP3.96□□□□□ -1.78
PMC1YGL006W AAD10P47182 288 aa3.96□□□□□ -1.78
PMC1YGL006W GPG1P53130 126 aa3.96□□□□□ -1.78
PMC1YGL006W SWC4P53201 476 aa3.96□□□□□ -1.78
PMC1YGL006W APM1Q00776 475 aaPredicted RBP3.96□□□□□ -1.78
PMC1YGL006W RNH202Q05635 350 aa3.96□□□□□ -1.78
PMC1YGL006W CST9Q06032 482 aa3.96□□□□□ -1.78
PMC1YGL006W YPR109WQ06104 294 aa3.96□□□□□ -1.78
PMC1YGL006W PHO5P00635 467 aa3.95□□□□□ -1.78
PMC1YGL006W HOM3P10869 527 aa3.95□□□□□ -1.78
PMC1YGL006W ZRC1P20107 442 aa3.95□□□□□ -1.78
PMC1YGL006W CPR2P23285 205 aa3.95□□□□□ -1.78
PMC1YGL006W GPI12P23797 304 aa3.95□□□□□ -1.78
PMC1YGL006W KRE6P32486 720 aa3.95□□□□□ -1.78
PMC1YGL006W THI80P35202 319 aa3.95□□□□□ -1.78
PMC1YGL006W DCW1P36091 449 aa3.95□□□□□ -1.78
PMC1YGL006W PHO90P39535 881 aa3.95□□□□□ -1.78
PMC1YGL006W SEN34P39707 275 aa3.95□□□□□ -1.78
PMC1YGL006W PGD1P40356 397 aa3.95□□□□□ -1.78
PMC1YGL006W GNA1P43577 159 aaPredicted RBP3.95□□□□□ -1.78
PMC1YGL006W SIP4P46954 829 aa3.95□□□□□ -1.78
PMC1YGL006W VPS25P47142 202 aa3.95□□□□□ -1.78
PMC1YGL006W AIM14P53109 570 aa3.95□□□□□ -1.78
PMC1YGL006W YGR079WP53249 370 aa3.95□□□□□ -1.78
PMC1YGL006W CSL4P53859 292 aaPredicted RBP3.95□□□□□ -1.78
PMC1YGL006W DPB4Q04603 196 aaKnown RBP3.95□□□□□ -1.78
PMC1YGL006W NDE2Q07500 545 aa3.95□□□□□ -1.78
PMC1YGL006W RRP40Q08285 240 aaKnown RBP3.95□□□□□ -1.78
PMC1YGL006W DCN1Q12395 269 aa3.95□□□□□ -1.78
PMC1YGL006W CDC13P32797 924 aaKnown RBP3.95□□□□□ -1.78
PMC1YGL006W SSN3P39073 555 aa3.95□□□□□ -1.78
PMC1YGL006W GCV3P39726 170 aaPredicted RBP3.95□□□□□ -1.78
PMC1YGL006W NBP35P52920 328 aa3.95□□□□□ -1.78
PMC1YGL006W YSA1Q01976 231 aa3.95□□□□□ -1.78
PMC1YGL006W YPL062WQ02781 134 aa3.95□□□□□ -1.78
PMC1YGL006W OAZ1Q02803 292 aa3.95□□□□□ -1.78
PMC1YGL006W UTP15Q04305 513 aaKnown RBP3.95□□□□□ -1.78
PMC1YGL006W ANT1Q06497 328 aa3.95□□□□□ -1.78
PMC1YGL006W TEN1Q07921 160 aa3.95□□□□□ -1.78
PMC1YGL006W INP53Q12271 1107 aa3.95□□□□□ -1.78
PMC1YGL006W TMA7Q3E764 64 aaKnown RBP3.95□□□□□ -1.78
PMC1YGL006W BEM2P39960 2167 aaKnown RBP3.95□□□□□ -1.78
PMC1YGL006W YAR066WP0CX18 203 aa3.95□□□□□ -1.78
PMC1YGL006W YHR214WP0CX19 203 aa3.95□□□□□ -1.78
PMC1YGL006W RPB3P16370 318 aaKnown RBP3.95□□□□□ -1.78
PMC1YGL006W MCM10P32354 571 aa3.95□□□□□ -1.78
PMC1YGL006W ORC2P32833 620 aa3.95□□□□□ -1.78
PMC1YGL006W MRPL37P36532 105 aa3.95□□□□□ -1.78
PMC1YGL006W TAT1P38085 619 aa3.95□□□□□ -1.78
PMC1YGL006W ATG8P38182 117 aaRIP-Chip data3.95□□□□□ -1.78not detected
PMC1YGL006W AIM46P38885 310 aa3.95□□□□□ -1.78
PMC1YGL006W GAT1P43574 510 aa3.95□□□□□ -1.78
PMC1YGL006W YGL117WP53133 265 aa3.95□□□□□ -1.78
PMC1YGL006W ELP6Q04868 273 aa3.95□□□□□ -1.78
PMC1YGL006W YPR091CQ06833 770 aa3.95□□□□□ -1.78
PMC1YGL006W RRT7Q07829 113 aa3.95□□□□□ -1.78
PMC1YGL006W IRC10Q08118 586 aa3.95□□□□□ -1.78
PMC1YGL006W LEA1Q08963 238 aaPredicted RBP3.95□□□□□ -1.78
PMC1YGL006W MOT1P32333 1867 aa3.95□□□□□ -1.78
PMC1YGL006W SNF5P18480 905 aa3.94□□□□□ -1.78
PMC1YGL006W MRPL8P22353 238 aa3.94□□□□□ -1.78
PMC1YGL006W PUB1P32588 453 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
PMC1YGL006W TIP20P33891 701 aa3.94□□□□□ -1.78
PMC1YGL006W DTR1P38125 572 aa3.94□□□□□ -1.78
PMC1YGL006W EMC5P40540 141 aa3.94□□□□□ -1.78
PMC1YGL006W MAD2P40958 196 aa3.94□□□□□ -1.78
PMC1YGL006W YJL043WP47053 257 aa3.94□□□□□ -1.78
PMC1YGL006W COS10P52924 374 aa3.94□□□□□ -1.78
PMC1YGL006W SGF73P53165 657 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 107.3 ms