RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C CSM3Q04659 317 aa1.29□□□□□ -2.2
RTR1YER139C DBP9Q06218 594 aaKnown RBP1.29□□□□□ -2.2
RTR1YER139C MMT2Q08970 484 aa1.29□□□□□ -2.2
RTR1YER139C YOL085CQ99345 113 aa1.29□□□□□ -2.2
RTR1YER139C RAD1P06777 1100 aa1.28□□□□□ -2.2
RTR1YER139C POT1P27796 417 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
RTR1YER139C CIN8P27895 1000 aa1.28□□□□□ -2.2
RTR1YER139C SKG6P32900 734 aaPredicted RBP1.28□□□□□ -2.2
RTR1YER139C MYO3P36006 1272 aa1.28□□□□□ -2.2
RTR1YER139C ALP1P38971 573 aa1.28□□□□□ -2.2
RTR1YER139C CAJ1P39101 391 aa1.28□□□□□ -2.2
RTR1YER139C YIL089WP40500 205 aa1.28□□□□□ -2.2
RTR1YER139C FYV8P46949 817 aaKnown RBP1.28□□□□□ -2.2
RTR1YER139C HCH1P53834 153 aa1.28□□□□□ -2.2
RTR1YER139C SED5Q01590 340 aa1.28□□□□□ -2.2
RTR1YER139C RRB1Q04225 511 aaKnown RBP1.28□□□□□ -2.2
RTR1YER139C ALE1Q08548 619 aa1.28□□□□□ -2.2
RTR1YER139C NBL1Q3E7Y6 73 aa1.28□□□□□ -2.2
RTR1YER139C RGS2Q99188 309 aa1.28□□□□□ -2.2
RTR1YER139C TAL1P15019 335 aaKnown RBP1.27□□□□□ -2.21
RTR1YER139C SMI1P32566 505 aa1.27□□□□□ -2.21
RTR1YER139C RAD23P32628 398 aaKnown RBP1.27□□□□□ -2.21
RTR1YER139C UTR5P32630 166 aa1.27□□□□□ -2.21
RTR1YER139C SIF2P38262 535 aa1.27□□□□□ -2.21
RTR1YER139C MMS21P38632 267 aa1.27□□□□□ -2.21
RTR1YER139C EFM1P38732 585 aa1.27□□□□□ -2.21
RTR1YER139C TRR2P38816 342 aa1.27□□□□□ -2.21
RTR1YER139C PRP39P39682 629 aaKnown RBP1.27□□□□□ -2.21
RTR1YER139C YCH1P42937 148 aa1.27□□□□□ -2.21
RTR1YER139C YFR018CP43599 363 aa1.27□□□□□ -2.21
RTR1YER139C YNL146WP53906 100 aa1.27□□□□□ -2.21
RTR1YER139C SCS7Q03529 384 aa1.27□□□□□ -2.21
RTR1YER139C INP1Q03694 420 aa1.27□□□□□ -2.21
RTR1YER139C YMR244WQ04018 355 aa1.27□□□□□ -2.21
RTR1YER139C UTP15Q04305 513 aaKnown RBP1.27□□□□□ -2.21
RTR1YER139C PML1Q07930 204 aaPredicted RBP1.27□□□□□ -2.21
RTR1YER139C TAF10Q12030 206 aa1.27□□□□□ -2.21
RTR1YER139C YDL211CQ12121 372 aa1.27□□□□□ -2.21
RTR1YER139C RPN6Q12377 434 aa1.27□□□□□ -2.21
RTR1YER139C SPO24Q3E752 67 aa1.27□□□□□ -2.21
RTR1YER139C MHP1P43638 1398 aa1.26□□□□□ -2.21
RTR1YER139C VPS63O13549 108 aa1.26□□□□□ -2.21
RTR1YER139C COX10P21592 462 aa1.26□□□□□ -2.21
RTR1YER139C RPS0AP32905 252 aaKnown RBP1.26□□□□□ -2.21
RTR1YER139C TIP20P33891 701 aa1.26□□□□□ -2.21
RTR1YER139C KTI12P34253 313 aaKnown RBP1.26□□□□□ -2.21
RTR1YER139C YHR122WP38829 231 aa1.26□□□□□ -2.21
RTR1YER139C YMR134WP40207 237 aa1.26□□□□□ -2.21
RTR1YER139C UFE1P41834 346 aa1.26□□□□□ -2.21
RTR1YER139C NAS6P50086 228 aa1.26□□□□□ -2.21
RTR1YER139C YGL114WP53134 725 aa1.26□□□□□ -2.21
RTR1YER139C YGR016WP53209 190 aa1.26□□□□□ -2.21
RTR1YER139C FMP48P53233 369 aa1.26□□□□□ -2.21
RTR1YER139C ZRG17P53735 605 aa1.26□□□□□ -2.21
RTR1YER139C INP2Q03824 705 aa1.26□□□□□ -2.21
RTR1YER139C CTA1P15202 515 aa1.25□□□□□ -2.21
RTR1YER139C VMA2P16140 517 aaKnown RBP1.25□□□□□ -2.21
RTR1YER139C CKA2P19454 339 aa1.25□□□□□ -2.21
RTR1YER139C KRR1P25586 316 aaPredicted RBP1.25□□□□□ -2.21
RTR1YER139C ERG9P29704 444 aa1.25□□□□□ -2.21
RTR1YER139C ITR2P30606 609 aa1.25□□□□□ -2.21
RTR1YER139C VMA5P31412 392 aaKnown RBP1.25□□□□□ -2.21
RTR1YER139C SRB2P34162 210 aa1.25□□□□□ -2.21
RTR1YER139C ZRT3P34240 503 aa1.25□□□□□ -2.21
RTR1YER139C FRM2P37261 193 aa1.25□□□□□ -2.21
RTR1YER139C PEX32P38292 413 aa1.25□□□□□ -2.21
RTR1YER139C SMF2P38778 549 aa1.25□□□□□ -2.21
RTR1YER139C BDH1P39714 382 aa1.25□□□□□ -2.21
RTR1YER139C BTT1P40314 149 aaPredicted RBP1.25□□□□□ -2.21
RTR1YER139C YIL059CP40520 121 aa1.25□□□□□ -2.21
RTR1YER139C ASG7P46993 209 aa1.25□□□□□ -2.21
RTR1YER139C VTI1Q04338 217 aa1.25□□□□□ -2.21
RTR1YER139C YDR286CQ05530 114 aa1.25□□□□□ -2.21
RTR1YER139C PSY3Q12318 242 aa1.25□□□□□ -2.21
RTR1YER139C REP1P03871 373 aa1.24□□□□□ -2.21
RTR1YER139C SPS100P13130 326 aa1.24□□□□□ -2.21
RTR1YER139C CPT1P17898 393 aa1.24□□□□□ -2.21
RTR1YER139C MRPL20P22354 195 aaPredicted RBP1.24□□□□□ -2.21
RTR1YER139C RBK1P25332 333 aa1.24□□□□□ -2.21
RTR1YER139C DCC1P25559 380 aa1.24□□□□□ -2.21
RTR1YER139C RFT1P38206 574 aaPredicted RBP1.24□□□□□ -2.21
RTR1YER139C YMR262WP38430 313 aa1.24□□□□□ -2.21
RTR1YER139C TPC1P53257 314 aa1.24□□□□□ -2.21
RTR1YER139C PXR1P53335 271 aaPredicted RBP1.24□□□□□ -2.21
RTR1YER139C YMR111CQ04461 462 aaPredicted RBP1.24□□□□□ -2.21
RTR1YER139C APC4Q04601 652 aa1.24□□□□□ -2.21
RTR1YER139C BUR2Q05949 395 aa1.24□□□□□ -2.21
RTR1YER139C FAR10Q06001 478 aa1.24□□□□□ -2.21
RTR1YER139C RPN8Q08723 338 aaKnown RBP1.24□□□□□ -2.21
RTR1YER139C YDR018CQ12185 396 aa1.24□□□□□ -2.21
RTR1YER139C RPL18AP0CX49 186 aaKnown RBP1.23□□□□□ -2.21
RTR1YER139C RPL18BP0CX50 186 aaKnown RBP1.23□□□□□ -2.21
RTR1YER139C ERD1P16151 362 aa1.23□□□□□ -2.21
RTR1YER139C MEI5P32489 222 aa1.23□□□□□ -2.21
RTR1YER139C YEL043WP32618 956 aa1.23□□□□□ -2.21
RTR1YER139C DSE1P40077 573 aa1.23□□□□□ -2.21
RTR1YER139C YIL054WP40524 105 aa1.23□□□□□ -2.21
RTR1YER139C COS4P43542 379 aa1.23□□□□□ -2.21
RTR1YER139C PMT4P46971 762 aa1.23□□□□□ -2.21
RTR1YER139C TAF6P53040 516 aa1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms