RNA–Protein interactions for RNA: YBR293W

VBA2, Transcript of Permease of basic amino acids in the vacuolar membrane, yeast

Gene VBA2, Length 1,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA2	YBR293W	COX11	P19516	300 aa	Known RBP	4.19	□□□□□ -1.74
VBA2	YBR293W	SEC59	P20048	519 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	PRE1	P22141	198 aa	Known RBP	4.19	□□□□□ -1.74
VBA2	YBR293W	RFA1	P22336	621 aa	Known RBP	4.19	□□□□□ -1.74
VBA2	YBR293W	RNA14	P25298	677 aa	Known RBP	4.19	□□□□□ -1.74
VBA2	YBR293W	STE50	P25344	346 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	YCL068C	P25593	260 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	YCR061W	P25639	631 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	CDC12	P32468	407 aa	Known RBP	4.19	□□□□□ -1.74
VBA2	YBR293W	SPS19	P32573	292 aa	Known RBP	4.19	□□□□□ -1.74
VBA2	YBR293W	SFC1	P33303	322 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	TMA19	P35691	167 aa	Known RBP	4.19	□□□□□ -1.74
VBA2	YBR293W	YBR063C	P38083	404 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	FLR1	P38124	548 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	MUP3	P38734	546 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	ALP1	P38971	573 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	DHH1	P39517	506 aa	Known RBP	4.19	□□□□□ -1.74
VBA2	YBR293W	DOT6	P40059	670 aa	Known RBP	4.19	□□□□□ -1.74
VBA2	YBR293W	SLZ1	P40167	298 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	YFL052W	P43551	465 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	GAT1	P43574	510 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	SIP4	P46954	829 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	NIT2	P47016	307 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	ZAP1	P47043	880 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	PHB2	P50085	310 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	TAF4	P50105	388 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	MNN10	P50108	393 aa	Known RBP	4.19	□□□□□ -1.74
VBA2	YBR293W	GTR2	P53290	341 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	ARG5,6	Q01217	863 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	GAS3	Q03655	524 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	RKM2	Q03942	479 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	CUE4	Q04201	117 aa	Predicted RBP	4.19	□□□□□ -1.74
VBA2	YBR293W	ANT1	Q06497	328 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	RFU1	Q08003	200 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	THP1	Q08231	455 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	HOS1	Q12214	470 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	EAF3	Q12432	401 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	AHC1	Q12433	566 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	MHT1	Q12525	324 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	EFG1	Q3E705	233 aa	Known RBP	4.19	□□□□□ -1.74
VBA2	YBR293W	COA6	Q3E846	104 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	HRP1	Q99383	534 aa	Known RBP	4.19	□□□□□ -1.74
VBA2	YBR293W	MOT1	P32333	1867 aa		4.19	□□□□□ -1.74
VBA2	YBR293W	RIM15	P43565	1770 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	RPS9A	O13516	197 aa	Known RBP	4.18	□□□□□ -1.74
VBA2	YBR293W	RPP2A	P05319	106 aa	Known RBP	4.18	□□□□□ -1.74
VBA2	YBR293W	FBP1	P09201	348 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	ATP5	P09457	212 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	YPK1	P12688	680 aa	Known RBP	4.18	□□□□□ -1.74
VBA2	YBR293W	SAM35	P14693	329 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	CKA1	P15790	372 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	RPB3	P16370	318 aa	Known RBP	4.18	□□□□□ -1.74
VBA2	YBR293W	CDC42	P19073	191 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	ZRC1	P20107	442 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	SEC62	P21825	274 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	CPR4	P25334	318 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	AHC2	P25649	128 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	COX13	P32799	129 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	YKL151C	P36059	337 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	DTR1	P38125	572 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	YBR071W	P38243	211 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	UBA4	P38820	440 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	RFC4	P40339	323 aa	Known RBP	4.18	□□□□□ -1.74
VBA2	YBR293W	COA1	P40452	197 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	BMT5	P40493	336 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	MND2	P40577	368 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	TAX4	P47030	604 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	DAN1	P47178	298 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	YJR154W	P47181	346 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	ALT2	P52892	507 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	COS10	P52924	374 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	MPA43	P53583	542 aa	Predicted RBP	4.18	□□□□□ -1.74
VBA2	YBR293W	BRE5	P53741	515 aa	Known RBP	4.18	□□□□□ -1.74
VBA2	YBR293W	APM1	Q00776	475 aa	Predicted RBP	4.18	□□□□□ -1.74
VBA2	YBR293W	MRP51	Q02950	344 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	TRS31	Q03337	283 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	DCR2	Q05924	578 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	FRQ1	Q06389	190 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	YOR365C	Q08844	703 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	NUS1	Q12063	375 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	RTK1	Q12100	620 aa	Predicted RBP	4.18	□□□□□ -1.74
VBA2	YBR293W	RGT2	Q12300	763 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	GIS3	Q12418	502 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	SKS1	Q12505	502 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	RMD5	Q12508	421 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	CTF3	Q12748	733 aa		4.18	□□□□□ -1.74
VBA2	YBR293W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.18	□□□□□ -1.74
VBA2	YBR293W	PNO1	Q99216	274 aa	Known RBP	4.18	□□□□□ -1.74
VBA2	YBR293W	YEL009C-A	A0A023PZF2	135 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	CET1	O13297	549 aa	Predicted RBP	4.17	□□□□□ -1.74
VBA2	YBR293W	CBP1	P07252	654 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	SEC12	P11655	471 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	PDX1	P16451	410 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	PRP2	P20095	876 aa	Predicted RBP	4.17	□□□□□ -1.74
VBA2	YBR293W	EPT1	P22140	391 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	VBA3	P25594	458 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	ADE1	P27616	306 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	COQ3	P27680	312 aa		4.17	□□□□□ -1.74
VBA2	YBR293W	VPH1	P32563	840 aa	Known RBP	4.17	□□□□□ -1.74
VBA2	YBR293W	COS9	P36034	407 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms