RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	RED1	P14291	827 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	KGD1	P20967	1014 aa	Known RBP	3.86	□□□□□ -1.79
SLX1	YBR228W	PPH21	P23594	369 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	BOS1	P25385	244 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	PHO91	P27514	894 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	FUN19	P28003	413 aa	Predicted RBP	3.86	□□□□□ -1.79
SLX1	YBR228W	YEL045C	P32616	141 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	FRE2	P36033	711 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	PIM1	P36775	1133 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	RPL32	P38061	130 aa	Known RBP	3.86	□□□□□ -1.79
SLX1	YBR228W	MUM2	P38236	366 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	TRM7	P38238	310 aa	Known RBP	3.86	□□□□□ -1.79
SLX1	YBR228W	FZO1	P38297	855 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	GGC1	P38988	300 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	YAL037W	P39728	267 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	PRE5	P40302	234 aa	Known RBP	3.86	□□□□□ -1.79
SLX1	YBR228W	CIS3	P47001	227 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	GTO1	P48239	356 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	MIG2	P53035	382 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	YGR126W	P53274	230 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	GIP3	Q03016	1276 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	YDR476C	Q03362	224 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	ECM11	Q04110	302 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	MFB1	Q04922	465 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	HNT3	Q08702	217 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	UAF30	Q08747	228 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	SNX3	Q08826	162 aa	Known RBP	3.86	□□□□□ -1.79
SLX1	YBR228W	JLP1	Q12358	412 aa		3.86	□□□□□ -1.79
SLX1	YBR228W	BRR1	Q99177	341 aa	Predicted RBP	3.86	□□□□□ -1.79
SLX1	YBR228W	MDM35	O60200	86 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	LEU4	P06208	619 aa	Known RBP	3.85	□□□□□ -1.79
SLX1	YBR228W	CCA1	P21269	546 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	ZIP1	P31111	875 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	MEI5	P32489	222 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	KKQ8	P36004	724 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	YCR087C-A	P37263	153 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	CBP4	P37267	147 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	HPM1	P40481	377 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	YPS6	P40583	537 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	MSO1	P53604	210 aa	Known RBP	3.85	□□□□□ -1.79
SLX1	YBR228W	PRO2	P54885	456 aa	Known RBP	3.85	□□□□□ -1.79
SLX1	YBR228W	MET31	Q03081	177 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	RAD30	Q04049	632 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	YML096W	Q04489	525 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	BSC6	Q08280	497 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	NSL1	Q12143	216 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	YKL018C-A	Q3E7A7	99 aa		3.85	□□□□□ -1.79
SLX1	YBR228W	FAS1	P07149	2051 aa	Known RBP	3.85	□□□□□ -1.79
SLX1	YBR228W	ATP6	P00854	259 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	TRX3	P25372	127 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	SPS22	P25380	463 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	PUT3	P25502	979 aa	Predicted RBP	3.84	□□□□□ -1.79
SLX1	YBR228W	ARA1	P38115	344 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	RRN10	P38204	145 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	ATG7	P38862	630 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	ALG5	P40350	334 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	AYR1	P40471	297 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	MAM33	P40513	266 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	APQ12	P40532	138 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	AIM22	P47051	409 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	ARE2	P53629	642 aa	Known RBP	3.84	□□□□□ -1.79
SLX1	YBR228W	YNL140C	P53910	189 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	RHO3	Q00245	231 aa	Known RBP	3.84	□□□□□ -1.79
SLX1	YBR228W	EGD1	Q02642	157 aa	Known RBP	3.84	□□□□□ -1.79
SLX1	YBR228W	IRC15	Q02733	499 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	ACL4	Q03771	387 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	ROY1	Q04847	553 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	DYN3	Q04949	312 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	PAL1	Q05518	499 aa	Known RBP	3.84	□□□□□ -1.79
SLX1	YBR228W	BCP1	Q06338	283 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	NMD4	Q12129	218 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	YOR114W	Q12219	294 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	IRA2	P19158	3079 aa		3.84	□□□□□ -1.79
SLX1	YBR228W	RAS2	P01120	322 aa	Known RBP	3.83	□□□□□ -1.8
SLX1	YBR228W	MRP13	P12686	339 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	CPR1	P14832	162 aa	Known RBP	3.83	□□□□□ -1.8
SLX1	YBR228W	FUR1	P18562	216 aa	Known RBP	3.83	□□□□□ -1.8
SLX1	YBR228W	REC107	P21651	314 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	CSM1	P25651	190 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	DEG1	P31115	442 aa	Known RBP	3.83	□□□□□ -1.8
SLX1	YBR228W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.83	□□□□□ -1.8	not detected
SLX1	YBR228W	CDC13	P32797	924 aa	Known RBP	3.83	□□□□□ -1.8
SLX1	YBR228W	RPT5	P33297	434 aa	Known RBP	3.83	□□□□□ -1.8
SLX1	YBR228W	SFC1	P33303	322 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	SKN1	P33336	771 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	UTH1	P36135	365 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	MRPL17	P36528	281 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	IST2	P38250	946 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	LYS1	P38998	373 aa	RIP-Chip data	3.83	□□□□□ -1.8	not detected
SLX1	YBR228W	JEM1	P40358	645 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	FMP32	P43557	207 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	BIO3	P50277	480 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	YMR010W	Q03687	405 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	HSP31	Q04432	237 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	YHC1	Q05900	231 aa	Known RBP	3.83	□□□□□ -1.8
SLX1	YBR228W	GGA1	Q06336	557 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	RKM5	Q12367	367 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	YER078W-A	Q3E7A2	54 aa		3.83	□□□□□ -1.8
SLX1	YBR228W	ARG3	P05150	338 aa		3.82	□□□□□ -1.8
SLX1	YBR228W	RPL1A	P0CX43	217 aa	Known RBP	3.82	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms