RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 C9orf118A6NHY6 69 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 H0Y858 1186 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 KLHL18O94889 574 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 KPNA1P52294 538 aaPredicted RBP5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 IDI1Q13907 227 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 STILQ15468 1287 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 FBLN7Q53RD9 439 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 LRSAM1Q6UWE0 723 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 CXXC5Q7LFL8 322 aaKnown RBP5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 EFHBQ8N7U6 833 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 NUDT10Q8NFP7 164 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 CHAC2Q8WUX2 184 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 NUDT11Q96G61 164 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 GPR101Q96P66 508 aaPredicted RBP5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 XYLT2Q9H1B5 865 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 PRKAB1Q9Y478 270 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 NAIPQ13075 1403 aa5.04□□□□□ -1.6
CKS1BP3-201ENST00000600888 MROH6A6NGR9 719 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 OTOL1A6NHN0 477 aaPredicted RBP5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 FKBP9O95302 570 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 VIL1P09327 827 aaKnown RBP5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 SOX5P35711 763 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 ADCYAP1R1P41586 468 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 GJA9P57773 515 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 IL2P60568 153 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 IL13RA1P78552 427 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 OCRLQ01968 901 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 KIAA2012Q0VF49 1180 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 EPHA7Q15375 998 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 DHCR24Q15392 516 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 FKBP9P1Q75LS8 142 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 KRT26Q7Z3Y9 468 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 STRA8Q7Z7C7 330 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 NME9Q86XW9 330 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 KRTAP1-3Q8IUG1 177 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 PASD1Q8IV76 773 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 ZDHHC14Q8IZN3 488 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 WDR48Q8TAF3 677 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 CALML6Q8TD86 181 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 E2F7Q96AV8 911 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 LCORQ96JN0 433 aaPredicted RBP5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 FOXB1Q99853 325 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 OR10A5Q9H207 317 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 TMX1Q9H3N1 280 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 TOMM22Q9NS69 142 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 SPTLC3Q9NUV7 552 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 EID1Q9Y6B2 187 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 HFM1A2PYH4 1435 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 ZFYVE9O95405 1425 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 NWD1Q149M9 1564 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 NUP155O75694 1391 aa5.03□□□□□ -1.6
CKS1BP3-201ENST00000600888 ALKQ9UM73 1620 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 TGM5O43548 720 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 INHBBP09529 407 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 BPIP17213 487 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 LSSP48449 732 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 SMAD3P84022 425 aaKnown RBP5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 CD83Q01151 205 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 ALDH6A1Q02252 535 aaKnown RBP5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 ADCY1Q08828 1119 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 NFATC3Q12968 1075 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 STRN3Q13033 797 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 WDR72Q3MJ13 1102 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 KANK2Q63ZY3 851 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 ESRP1Q6NXG1 681 aaKnown RBP5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 Q6ZUG5 572 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 FAM124AQ86V42 546 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 ZZZ3Q8IYH5 903 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 KLHL36Q8N4N3 616 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 USP7Q93009 1102 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 MBD6Q96DN6 1003 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 MAML3Q96JK9 1138 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 SCYL1Q96KG9 808 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 BARX1Q9HBU1 254 aaPredicted RBP5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 USP40Q9NVE5 1235 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 ZDHHC9Q9Y397 364 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 LRRC7Q96NW7 1537 aa5.02□□□□□ -1.61
CKS1BP3-201ENST00000600888 DIP2AQ14689 1571 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 UBA6A0AVT1 1052 aaPredicted RBP5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 PRLP01236 227 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 HOXA5P20719 270 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 POLD1P28340 1107 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 SLC6A3Q01959 620 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 LRRC32Q14392 662 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 TTC38Q5R3I4 469 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 ZNF662Q6ZS27 426 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 TTLL10Q6ZVT0 673 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 FRMD5Q7Z6J6 570 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 C11orf74Q86VG3 221 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 AJUBAQ96IF1 538 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 TTC1Q99614 292 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 KATNBL1Q9H079 304 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 IFT22Q9H7X7 185 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 ZMAT4Q9H898 229 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 EMC7Q9NPA0 242 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 ADAM29Q9UKF5 820 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 TRPM2O94759 1503 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 PLEKHG1Q9ULL1 1385 aa5.01□□□□□ -1.61
CKS1BP3-201ENST00000600888 NKTRP30414 1462 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms