RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 TECTAO75443 2155 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 M0R2N6 131 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 STBD1O95210 358 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 DEXIO95424 95 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 CLLU1OSQ5K130 101 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 GALNT17Q6IS24 598 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 MIER3Q7Z3K6 550 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 TMC7Q7Z402 723 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 BLIDQ8IZY5 108 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 DAGLBQ8NCG7 672 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 NLRP7Q8WX94 980 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 GJA10Q969M2 543 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 MBOAT7Q96N66 472 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 CEP89Q96ST8 783 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 TCF25Q9BQ70 676 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 TRAIPQ9BWF2 469 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 CHST12Q9NRB3 414 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 SPG21Q9NZD8 308 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 ZNF318Q5VUA4 2279 aa14.13□□□□□ -0.15
SMARCD2-207ENST00000578234 MYO10Q9HD67 2058 aa14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 IGKV6-21A0A0C4DH24 114 aa14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 CPLX1O14810 134 aa14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 TDP2O95551 362 aa14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 PBX3P40426 434 aa14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 DNM2P50570 870 aa14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 DRP2Q13474 957 aa14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 TRIM67Q6ZTA4 783 aa14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 ZNF598Q86UK7 904 aaKnown RBP14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 RSPH1Q8WYR4 309 aa14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 GCOM2Q9BZD3 368 aaPredicted RBP14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 TM6SF1Q9BZW5 370 aa14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 INO80BQ9C086 356 aaPredicted RBP14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 S1PR5Q9H228 398 aa14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 PDRG1Q9NUG6 133 aa14.12□□□□□ -0.15
SMARCD2-207ENST00000578234 HIDE1A8MVS5 230 aa14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 HOXB8P17481 243 aaPredicted RBP14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 FGFR4P22455 802 aa14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 ANAPC15P60006 121 aa14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 ZXDAP98168 799 aa14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 NPY5RQ15761 445 aa14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 LONRF3Q496Y0 759 aa14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 MTERF2Q49AM1 385 aa14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 ANKRD54Q6NXT1 300 aa14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 CPLX2Q6PUV4 134 aaKnown RBP14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 ZNF410Q86VK4 478 aa14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 SLC39A11Q8N1S5 342 aa14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 MRPL43Q8N983 215 aaKnown RBP14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 ETNPPLQ8TBG4 499 aa14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 MRPL9Q9BYD2 267 aaKnown RBP14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 SEPT9Q9UHD8 586 aaPredicted RBP14.11□□□□□ -0.15
SMARCD2-207ENST00000578234 A0A087WZ62 844 aa14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 SPDYE4A6NLX3 237 aa14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 MAFO75444 373 aaPredicted RBP14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 CSDE1O75534 798 aaKnown RBP14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 SKIP12755 728 aa14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 SFPQP23246 707 aaKnown RBP eCLIP14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 ALDH7A1P49419 539 aaKnown RBP14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 NONOQ15233 471 aaKnown RBP eCLIP14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 IER5LQ5T953 404 aa14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 SYCE2Q6PIF2 218 aa14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 HELQQ8TDG4 1101 aa14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 JPH2Q9BR39 696 aaPredicted RBP14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 FDXACB1Q9BRP7 624 aaPredicted RBP14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 UPF2Q9HAU5 1272 aaKnown RBP14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 DDX25Q9UHL0 483 aaKnown RBP14.1□□□□□ -0.15
SMARCD2-207ENST00000578234 CARNS1A5YM72 827 aa14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 TMEM150BA6NC51 233 aa14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 C2orf71A6NGG8 1288 aa14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 DDX11L8A8MPP1 907 aa14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 PHKA2P46019 1235 aa14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 BCAR1P56945 870 aa14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 PSMC5P62195 406 aa14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 SMC1AQ14683 1233 aaKnown RBP14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 BMS1Q14692 1282 aaKnown RBP14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 ANO5Q75V66 913 aa14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 KRT25Q7Z3Z0 450 aa14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 FAM20AQ96MK3 541 aa14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 AIFM3Q96NN9 605 aa14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 SH2D3AQ9BRG2 576 aa14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 BACH2Q9BYV9 841 aa14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 SUCLA2Q9P2R7 463 aaPredicted RBP14.09□□□□□ -0.15
SMARCD2-207ENST00000578234 NT5C1B-RDH14C9J2C7 533 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 DKC1O60832 514 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 ZNF623O75123 536 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 QARSP47897 775 aaKnown RBP14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 NEK4P51957 841 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 STK3Q13188 491 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 PPP2R5CQ13362 524 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 INF2Q27J81 1249 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 TPRNQ4KMQ1 711 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 TWF2Q6IBS0 349 aaKnown RBP14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 PPP4R3AQ6IN85 833 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 CES5AQ6NT32 575 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 RHPN2Q8IUC4 686 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 CASP10Q92851 521 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 PHOX2BQ99453 314 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 PHF20Q9BVI0 1012 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 KCNMB3Q9NPA1 279 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 HCFC2Q9Y5Z7 792 aa14.08□□□□□ -0.16
SMARCD2-207ENST00000578234 EML1O00423 815 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms